BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0423300 Os03g0423300|AK070282
(418 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0423300 Similar to Stearoyl-acyl carrier protein desat... 753 0.0
Os08g0200100 Fatty acid desaturase, type 2 family protein 416 e-116
Os04g0379900 Similar to Acyl-[acyl-carrier-protein] desatur... 397 e-111
Os08g0199400 Similar to Stearoyl-acyl carrier protein desat... 392 e-109
Os01g0919900 Similar to Acyl-[acyl-carrier-protein] desatur... 384 e-107
Os01g0880800 Similar to Acyl-[acyl-carrier-protein] desatur... 380 e-105
Os02g0504800 Similar to Delta-9 stearoyl-acyl carrier prote... 218 5e-57
Os03g0741000 162 4e-40
Os06g0503800 145 5e-35
>Os03g0423300 Similar to Stearoyl-acyl carrier protein desaturse (EC 1.14.99.6)
(Fragment)
Length = 418
Score = 753 bits (1944), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/418 (92%), Positives = 387/418 (92%)
Query: 1 MASSGLAVAATASSAWLCCPNHHIHTXXXXXXXXXXXXXXYGSAPARTRGRRPPVWXXXX 60
MASSGLAVAATASSAWLCCPNHHIHT YGSAPARTRGRRPPVW
Sbjct: 1 MASSGLAVAATASSAWLCCPNHHIHTSSSRSRKHLLLHGLYGSAPARTRGRRPPVWTAAA 60
Query: 61 XXXXXXXXXXXXXRREQVEIARSLNAWVEENMLPLLTPVDSAWQPHDFLPCSAAGGGEAL 120
RREQVEIARSLNAWVEENMLPLLTPVDSAWQPHDFLPCSAAGGGEAL
Sbjct: 61 ATAAAPADTAASARREQVEIARSLNAWVEENMLPLLTPVDSAWQPHDFLPCSAAGGGEAL 120
Query: 121 AAFTEGVAELRAGAAGVPDEVLVCLVGNMVTEEALPTYQSMGNRAEGLADGTGVSPLPWA 180
AAFTEGVAELRAGAAGVPDEVLVCLVGNMVTEEALPTYQSMGNRAEGLADGTGVSPLPWA
Sbjct: 121 AAFTEGVAELRAGAAGVPDEVLVCLVGNMVTEEALPTYQSMGNRAEGLADGTGVSPLPWA 180
Query: 181 RWLRGWTAEENRHGDLLNRYLYLSGRVDMRQVEATVHRLLRNGMEMLAPASPYHGLIYGA 240
RWLRGWTAEENRHGDLLNRYLYLSGRVDMRQVEATVHRLLRNGMEMLAPASPYHGLIYGA
Sbjct: 181 RWLRGWTAEENRHGDLLNRYLYLSGRVDMRQVEATVHRLLRNGMEMLAPASPYHGLIYGA 240
Query: 241 FQERATFISHGHTARLAGQHGDRALAKICGVIAADERRHEAGYTMASGRLFELDPDGMAR 300
FQERATFISHGHTARLAGQHGDRALAKICGVIAADERRHEAGYTMASGRLFELDPDGMAR
Sbjct: 241 FQERATFISHGHTARLAGQHGDRALAKICGVIAADERRHEAGYTMASGRLFELDPDGMAR 300
Query: 301 ALADVMRGKVTMPGQLMSDGRDGDGEHSLFARFSAVAERAGVYTARDYGDLVEHFVRRWR 360
ALADVMRGKVTMPGQLMSDGRDGDGEHSLFARFSAVAERAGVYTARDYGDLVEHFVRRWR
Sbjct: 301 ALADVMRGKVTMPGQLMSDGRDGDGEHSLFARFSAVAERAGVYTARDYGDLVEHFVRRWR 360
Query: 361 VAELAAGLSGEGRRAQEYLCGLAPKIRRMEELAHRRAARIEPAMARFSWIFDRPVMLG 418
VAELAAGLSGEGRRAQEYLCGLAPKIRRMEELAHRRAARIEPAMARFSWIFDRPVMLG
Sbjct: 361 VAELAAGLSGEGRRAQEYLCGLAPKIRRMEELAHRRAARIEPAMARFSWIFDRPVMLG 418
>Os08g0200100 Fatty acid desaturase, type 2 family protein
Length = 404
Score = 416 bits (1068), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/343 (62%), Positives = 250/343 (72%), Gaps = 9/343 (2%)
Query: 77 QVEIARSLNAWVEENMLPLLTPVDSAWQPHDFLPCSAAGGGEALAAFTEGVAELRAGAAG 136
++E+ + WVE ++LPLL P + AWQP D +P +AA G + F ELR AAG
Sbjct: 66 RLEVLEQMEPWVEAHVLPLLKPAEEAWQPADLVPDAAALGADG---FHAACVELRGRAAG 122
Query: 137 VPDEVLVCLVGNMVTEEALPTYQSMGNRAEGLADGTGVSPLPWARWLRGWTAEENRHGDL 196
VPD LVCLVGNMVTEEALPTYQSM NR E D TG WARW+RGW+AEENRHGD+
Sbjct: 123 VPDAHLVCLVGNMVTEEALPTYQSMANRFESARDVTGADATAWARWIRGWSAEENRHGDV 182
Query: 197 LNRYLYLSGRVDMRQVEATVHRLLRNGMEMLAPASPYHGLIYGAFQERATFISHGHTARL 256
LNRY+YLSGR+DMRQVE TVHRL+ +GM M APASPYHG IY AFQERAT ISHG+TAR
Sbjct: 183 LNRYMYLSGRLDMRQVERTVHRLIGSGMAMHAPASPYHGFIYVAFQERATAISHGNTARN 242
Query: 257 AGQHGDRALAKICGVIAADERRHEAGYTMASGRLFELDPDGMARALADVMRGKVTMPGQL 316
HGD ALA+ICG IA+DE+RHEA YT RL E DPD RALA +MR ++TMP L
Sbjct: 243 VRAHGDDALARICGAIASDEKRHEAAYTRVVERLLEADPDTTVRALAYMMRRRITMPAAL 302
Query: 317 MSDGRDGDGEHSLFARFSAVAERAGVYTARDYGDLVEHFVRRWRVAELAAGLSGEGRRAQ 376
M DGRD D LFA ++A A++AG YTA DY ++EH +RRWRVAEL AGLSGEGRRA+
Sbjct: 303 MDDGRDAD----LFAHYAAAAQQAGTYTASDYRGILEHLIRRWRVAELEAGLSGEGRRAR 358
Query: 377 EYLCGLAPKIRRMEELAHRRAA--RIEPAMARFSWIFDRPVML 417
+Y+C L KIRRMEE AH RAA R P FSWIFD+PV L
Sbjct: 359 DYVCALPQKIRRMEEKAHDRAAQMRKRPTAIPFSWIFDKPVDL 401
>Os04g0379900 Similar to Acyl-[acyl-carrier-protein] desaturase, chloroplast
precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
Length = 390
Score = 397 bits (1020), Expect = e-111, Method: Compositional matrix adjust.
Identities = 190/342 (55%), Positives = 245/342 (71%), Gaps = 13/342 (3%)
Query: 76 EQVEIARSLNAWVEENMLPLLTPVDSAWQPHDFLPCSAAGGGEALAAFTEGVAELRAGAA 135
++ EI SL W +EN+L LL PV+ +WQP DFLP ++ G F + V ELR A
Sbjct: 62 QKREIFDSLQPWAKENLLNLLKPVEKSWQPQDFLPDPSSDG------FYDEVKELRERAK 115
Query: 136 GVPDEVLVCLVGNMVTEEALPTYQSMGNRAEGLADGTGVSPLPWARWLRGWTAEENRHGD 195
+PD+ VCLVG+MVTEEALPTYQ+M N +G+ D TG SP WA W R WTAEENRHGD
Sbjct: 116 EIPDDYFVCLVGDMVTEEALPTYQTMLNTLDGVRDETGASPTTWAVWTRAWTAEENRHGD 175
Query: 196 LLNRYLYLSGRVDMRQVEATVHRLLRNGMEMLAPASPYHGLIYGAFQERATFISHGHTAR 255
LLN+Y+YL+GRVDM+Q+E T+ L+ +GM+ +PY G +Y +FQERATFISHG+TAR
Sbjct: 176 LLNKYMYLTGRVDMKQIEKTIQYLIGSGMDPGTENNPYLGFLYTSFQERATFISHGNTAR 235
Query: 256 LAGQHGDRALAKICGVIAADERRHEAGYTMASGRLFELDPDGMARALADVMRGKVTMPGQ 315
A ++GD LA+ICG IAADE+RHE YT +LFE+DPD A AD+MR K++MP
Sbjct: 236 HAKEYGDLKLAQICGTIAADEKRHETAYTKIVEKLFEIDPDYTVLAFADMMRKKISMPAH 295
Query: 316 LMSDGRDGDGEHSLFARFSAVAERAGVYTARDYGDLVEHFVRRWRVAELAAGLSGEGRRA 375
LM DG+D + LF FSAVA+R GVYTARDY D++E V+RW+VA+L GLSGEGRRA
Sbjct: 296 LMYDGKDDN----LFEHFSAVAQRLGVYTARDYADILEFLVQRWKVADL-TGLSGEGRRA 350
Query: 376 QEYLCGLAPKIRRMEELAHRRAARIEPAMARFSWIFDRPVML 417
Q+++C LAP+IRR++E A RA + + FSW++DR V L
Sbjct: 351 QDFVCTLAPRIRRLDERAQARAK--QAPVIPFSWVYDRKVQL 390
>Os08g0199400 Similar to Stearoyl-acyl carrier protein desaturse (EC 1.14.99.6)
(Fragment)
Length = 419
Score = 392 bits (1007), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/344 (58%), Positives = 242/344 (70%), Gaps = 11/344 (3%)
Query: 76 EQVEIARSLNAWVEENMLPLLTPVDSAWQPHDFLPCSAAGGGEALAAFTEGVAELRAGAA 135
E++E+ + WVEE++LPLL PV++AWQP D LP A GGE F AELR AA
Sbjct: 78 EKLEVLTQMEPWVEEHVLPLLKPVEAAWQPSDLLPDPAVLGGEG---FHAACAELRERAA 134
Query: 136 GVPDEVLVCLVGNMVTEEALPTYQSMGNRAEGLADGTGVSPLPWARWLRGWTAEENRHGD 195
GVPD +LVCLV NMVTEEALPTYQS NR + D TG WARW+RGW+AEENRHGD
Sbjct: 135 GVPDLLLVCLVANMVTEEALPTYQSSLNRVRAVGDLTGADATAWARWIRGWSAEENRHGD 194
Query: 196 LLNRYLYLSGRVDMRQVEATVHRLLRNGMEMLAPASPYHGLIYGAFQERATFISHGHTAR 255
+LNRY+YLSGR DM +VE VHRL+R+GM + P SPYH +Y AFQERAT ++HG+TAR
Sbjct: 195 VLNRYMYLSGRFDMAEVERAVHRLIRSGMAVDPPCSPYHAFVYTAFQERATAVAHGNTAR 254
Query: 256 LAGQ--HGDRALAKICGVIAADERRHEAGYTMASGRLFELDPDGMARALADVMRGKVTMP 313
L G HGD ALA++CG +AADE+RHEA YT RL E DPD RA+A ++R V MP
Sbjct: 255 LVGARGHGDAALARVCGTVAADEKRHEAAYTRIVSRLLEADPDAGVRAVARMLRRGVAMP 314
Query: 314 GQLMSDGRDGDGEHSLFARFSAVAERAGVYTARDYGDLVEHFVRRWRVAELAAGLSGEGR 373
+SDGR D L+A ++AE+AG YT DY +VEH VR WRV ELAAGLSGEGR
Sbjct: 315 TSPISDGRRDD----LYACVVSLAEQAGTYTVSDYCSIVEHLVREWRVEELAAGLSGEGR 370
Query: 374 RAQEYLCGLAPKIRRMEELAHRRA--ARIEPAMARFSWIFDRPV 415
RA++Y+C L KIRRM+E AH RA A+ +P +WIFDR V
Sbjct: 371 RARDYVCELPQKIRRMKEKAHERAVKAQKKPISIPINWIFDRHV 414
>Os01g0919900 Similar to Acyl-[acyl-carrier-protein] desaturase, chloroplast
precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
(Delta(9) stearoyl-acyl carrier protein desaturase)
Length = 400
Score = 384 bits (985), Expect = e-107, Method: Compositional matrix adjust.
Identities = 183/342 (53%), Positives = 236/342 (69%), Gaps = 13/342 (3%)
Query: 76 EQVEIARSLNAWVEENMLPLLTPVDSAWQPHDFLPCSAAGGGEALAAFTEGVAELRAGAA 135
+++EI +SL+ W +N+L L PV+ WQP DFLP A+ G F + V ELR A
Sbjct: 72 QKIEIFKSLDDWARDNILSHLKPVEKCWQPQDFLPDPASDG------FHDEVKELRERAK 125
Query: 136 GVPDEVLVCLVGNMVTEEALPTYQSMGNRAEGLADGTGVSPLPWARWLRGWTAEENRHGD 195
+PD+ VCLVG+M+TEEALPTYQ+M N +G+ D TG SP WA W R WTAEENRHGD
Sbjct: 126 EIPDDYFVCLVGDMITEEALPTYQTMLNTLDGVRDETGASPTAWAVWTRAWTAEENRHGD 185
Query: 196 LLNRYLYLSGRVDMRQVEATVHRLLRNGMEMLAPASPYHGLIYGAFQERATFISHGHTAR 255
LLN+YLYL+GRVDMRQ+E T+ L+ +GM+ +PY G IY +FQERATFISHG+TAR
Sbjct: 186 LLNKYLYLTGRVDMRQIEKTIQYLIGSGMDPRTENNPYLGFIYTSFQERATFISHGNTAR 245
Query: 256 LAGQHGDRALAKICGVIAADERRHEAGYTMASGRLFELDPDGMARALADVMRGKVTMPGQ 315
A GD LA+ICG+IA+DE+RHE YT +LFE+DPDG A AD+M+ K++MP
Sbjct: 246 HAKDFGDLKLAQICGIIASDEKRHETAYTKIVEKLFEIDPDGTVLAFADMMKKKISMPAH 305
Query: 316 LMSDGRDGDGEHSLFARFSAVAERAGVYTARDYGDLVEHFVRRWRVAELAAGLSGEGRRA 375
LM DG D LF FS VA+R GVYTA+DY D++E V RW++++L GLS EG +A
Sbjct: 306 LMFDGEDD----KLFEHFSMVAQRLGVYTAKDYADILEFLVSRWKISDL-TGLSSEGNKA 360
Query: 376 QEYLCGLAPKIRRMEELAHRRAARIEPAMARFSWIFDRPVML 417
Q+YLC LA +IRR++E A RA + FSW++ R V L
Sbjct: 361 QDYLCTLAARIRRLDERAQSRAKK--AGTLPFSWVYGREVQL 400
>Os01g0880800 Similar to Acyl-[acyl-carrier-protein] desaturase, chloroplast
precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
Length = 381
Score = 380 bits (976), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/342 (54%), Positives = 236/342 (69%), Gaps = 10/342 (2%)
Query: 76 EQVEIARSLNAWVEENMLPLLTPVDSAWQPHDFLPCSAAGGGEALAAFTEGVAELRAGAA 135
E+ E+ RSL W ++LPLL PV+ WQP DFLP S++ F V ELRA AA
Sbjct: 50 EKAEVFRSLEGWARSSLLPLLKPVEECWQPTDFLPDSSS------EMFEHQVHELRARAA 103
Query: 136 GVPDEVLVCLVGNMVTEEALPTYQSMGNRAEGLADGTGVSPLPWARWLRGWTAEENRHGD 195
G+PDE V LVG+M+TEEALPTYQ+M N +G+ D TG S PWA W R WTAEENRHGD
Sbjct: 104 GLPDEYFVVLVGDMITEEALPTYQTMINTLDGVRDETGASACPWAVWTRTWTAEENRHGD 163
Query: 196 LLNRYLYLSGRVDMRQVEATVHRLLRNGMEMLAPASPYHGLIYGAFQERATFISHGHTAR 255
+L +Y+YLSGRVDMR VE TV L+ +GM+ +PY G +Y +FQERAT +SHG+TAR
Sbjct: 164 ILGKYMYLSGRVDMRMVEKTVQYLIGSGMDPGTENNPYLGFVYTSFQERATAVSHGNTAR 223
Query: 256 LAGQHGDRALAKICGVIAADERRHEAGYTMASGRLFELDPDGMARALADVMRGKVTMPGQ 315
LA HGD LA+ CG IAADE+RHE Y +L LDPDG A+AD+M ++TMP
Sbjct: 224 LARAHGDDVLARTCGTIAADEKRHETAYGRIVEQLLRLDPDGAMLAIADMMHKRITMPAH 283
Query: 316 LMSDGRDGDGEHSLFARFSAVAERAGVYTARDYGDLVEHFVRRWRVAELAAGLSGEGRRA 375
LM DGRD +LF F+AVA+R VYTARDY D+VE V+RW++ L GLSGEGRRA
Sbjct: 284 LMHDGRD----MNLFDHFAAVAQRLNVYTARDYADIVEFLVKRWKLETLETGLSGEGRRA 339
Query: 376 QEYLCGLAPKIRRMEELAHRRAARIEPAMARFSWIFDRPVML 417
++++CGLA ++RR E A RA + E +FSWI+DR V++
Sbjct: 340 RDFVCGLAKRMRRAAERAEDRAKKDEQRKVKFSWIYDREVIV 381
>Os02g0504800 Similar to Delta-9 stearoyl-acyl carrier protein desaturase (EC
1.14.99.6) (Fragment)
Length = 322
Score = 218 bits (556), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 110/199 (55%), Positives = 137/199 (68%), Gaps = 7/199 (3%)
Query: 76 EQVEIARSLNAWVEENMLPLLTPVDSAWQPHDFLPCSAAGGGEALAAFTEGVAELRAGAA 135
E+ E+ SL W + +LP L PV+ +WQP D LP + +F + VA LR AA
Sbjct: 69 EKKEVFDSLEGWAADTILPYLKPVEESWQPQDHLPDPRS------PSFGDEVAALRERAA 122
Query: 136 GVPDEVLVCLVGNMVTEEALPTYQSMGNRAEG-LADGTGVSPLPWARWLRGWTAEENRHG 194
G+PD+ LVCLVG+MVTEEALPTYQ+M N +G + D TG WA W R W AEENRHG
Sbjct: 123 GLPDDHLVCLVGDMVTEEALPTYQTMLNTMDGGVRDETGAGGSAWAVWTRAWAAEENRHG 182
Query: 195 DLLNRYLYLSGRVDMRQVEATVHRLLRNGMEMLAPASPYHGLIYGAFQERATFISHGHTA 254
DL+N+YLYL+GRVDMRQVE T+ L+ +GM+ PY G IY FQERAT ISHG+TA
Sbjct: 183 DLMNKYLYLTGRVDMRQVEKTIQYLIGSGMDPRTENDPYMGFIYTTFQERATSISHGNTA 242
Query: 255 RLAGQHGDRALAKICGVIA 273
R AG+HGD ALA++CG +A
Sbjct: 243 RHAGRHGDAALARVCGTVA 261
>Os03g0741000
Length = 192
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 87/156 (55%), Positives = 101/156 (64%), Gaps = 14/156 (8%)
Query: 84 LNAWVEENMLPLLTPVDSAWQPHDFLPCSAAGGGEALAAFTEGVAELRAGAA-------- 135
+ WVE+++L LL P AWQP D +P +AA G + F ELR AA
Sbjct: 1 MEPWVEQHVLLLLKPAKEAWQPEDMVPDAAALGADG---FHAACLELRECAARRALSSGS 57
Query: 136 ---GVPDEVLVCLVGNMVTEEALPTYQSMGNRAEGLADGTGVSPLPWARWLRGWTAEENR 192
GVPD LVCLVGNMVTEEALPTYQSM NR E D TG WARW+ W+AEEN
Sbjct: 58 ALRGVPDAHLVCLVGNMVTEEALPTYQSMVNRFESARDVTGADGTAWARWICRWSAEENH 117
Query: 193 HGDLLNRYLYLSGRVDMRQVEATVHRLLRNGMEMLA 228
H D+LNRY+YLSGR+DMRQVE TVHRL+ +GM M A
Sbjct: 118 HDDVLNRYMYLSGRLDMRQVERTVHRLISSGMAMHA 153
>Os06g0503800
Length = 158
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 67/98 (68%), Positives = 76/98 (77%)
Query: 149 MVTEEALPTYQSMGNRAEGLADGTGVSPLPWARWLRGWTAEENRHGDLLNRYLYLSGRVD 208
MV EEALPTYQSM NR E D TG + WARW+ W+A+ENRHGD+LNRY+YLSGR+D
Sbjct: 1 MVMEEALPTYQSMANRFESARDVTGADRMAWARWICRWSAKENRHGDVLNRYMYLSGRLD 60
Query: 209 MRQVEATVHRLLRNGMEMLAPASPYHGLIYGAFQERAT 246
MRQVE TVHRL+ +GM M AP SPYHG Y FQERAT
Sbjct: 61 MRQVERTVHRLISSGMAMHAPVSPYHGFSYVVFQERAT 98
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.135 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,838,552
Number of extensions: 636643
Number of successful extensions: 1658
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 1639
Number of HSP's successfully gapped: 10
Length of query: 418
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 315
Effective length of database: 11,657,759
Effective search space: 3672194085
Effective search space used: 3672194085
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 157 (65.1 bits)