Os04g0379900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Acyl-[acyl-carrier-protein] desaturase, chloroplast precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase).
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Os04g0379900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Acyl-[acyl-carrier-protein] desaturase, chloroplast precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.41 | 0.276 | 11.1 | 1.28 | 0.642 | 0.418 | -0.0831 | -0.779 | 0.694 | 4.02 | 19.99 | 1446 | -- | -- |
| 35.92 | 0.279 | 11.1 | 1.25 | 0.641 | 0.422 | -0.101 | -- | 0.692 | 4 | 19.98 | 1451 | -- | -- |
| 34.38 | 0.273 | 11.1 | 1.28 | 0.634 | 0.422 | -- | -0.781 | 0.698 | 4.09 | 20 | 1484 | -- | -- |
| 35.88 | 0.279 | 11.1 | 1.24 | 0.643 | 0.426 | -- | -- | 0.689 | 4.08 | 19.82 | 1484 | -- | -- |
| 37.24 | 0.284 | 11.1 | 1.13 | -- | 0.686 | -- | -0.433 | 0.62 | -- | 8.222 | 495 | -- | -- |
| 42.04 | 0.304 | 11.1 | 1.2 | 0.631 | -- | -0.141 | -- | 0.583 | 4.09 | -- | -- | -- | -- |
| 42.1 | 0.304 | 11.1 | 1.2 | 0.63 | -- | -- | -- | 0.584 | 4.08 | -- | -- | -- | -- |
| 37.46 | 0.285 | 11.1 | 1.15 | -- | 0.694 | -- | -- | 0.616 | -- | 8.726 | 491 | -- | -- |
| 71.77 | 0.395 | 11.1 | -- | 0.647 | 0.426 | -- | -- | 0.687 | 4.29 | 19.91 | 27494 | -- | -- |
| 63.67 | 0.373 | 11.1 | 1.22 | -- | -- | -- | -- | 0.601 | -- | -- | -- | -- | -- |
| 80.01 | 0.418 | 11.2 | -- | 0.653 | -- | -- | -- | 0.45 | 4.05 | -- | -- | -- | -- |
| 62.37 | 0.368 | 11.2 | -- | -- | 1.16 | -- | -- | 0.319 | -- | 59.96 | 26489 | -- | -- |
| 103.25 | 0.474 | 11.2 | -- | -- | -- | -- | -- | 0.465 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.90 | radiation | 40 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 2 | 32.92 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 5 | 33.40 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 6 | 33.51 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 7 | 33.59 | radiation | 1 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 11 | 33.90 | wind | 9 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 17 | 33.98 | wind | 9 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 18 | 34.03 | radiation | 30 | 4320 | < th | dose independent | rect. | 16 | 16 |
| 19 | 34.05 | radiation | 20 | 1440 | < th | dose independent | rect. | 15 | 22 |
| 21 | 34.08 | temperature | 20 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 51 | 34.37 | radiation | 10 | 1440 | < th | dose independent | rect. | 15 | 2 |
| 58 | 34.40 | radiation | 20 | 1440 | < th | dose independent | rect. | 10 | 23 |
| 61 | 34.42 | radiation | 20 | 1440 | < th | dose independent | no | NA | NA |
| 64 | 34.42 | radiation | 30 | 1440 | < th | dose independent | rect. | 6 | 7 |
| 69 | 34.42 | radiation | 20 | 1440 | < th | dose independent | rect. | 6 | 12 |
| 117 | 34.42 | radiation | 20 | 1440 | < th | dose independent | rect. | 22 | 21 |
| 131 | 34.42 | radiation | 20 | 1440 | < th | dose independent | rect. | 20 | 23 |
| 132 | 34.42 | radiation | 20 | 1440 | < th | dose independent | rect. | 22 | 23 |
| 134 | 34.42 | radiation | 20 | 4320 | > th | dose dependent | rect. | 16 | 16 |
| 135 | 34.43 | radiation | 20 | 1440 | < th | dose independent | sin | 0 | NA |
| 163 | 34.43 | radiation | 20 | 1440 | < th | dose independent | rect. | 22 | 19 |
| 167 | 34.43 | radiation | 20 | 1440 | < th | dose independent | rect. | 20 | 21 |
| 183 | 34.44 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 185 | 34.44 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 18 | 3 |
| 197 | 34.45 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 205 | 34.45 | radiation | 10 | 1440 | < th | dose independent | rect. | 13 | 17 |
| 238 | 34.49 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 241 | 34.50 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 15 | 8 |
| 262 | 34.55 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 265 | 34.55 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 15 | 8 |
| 292 | 34.58 | radiation | 10 | 1440 | < th | dose independent | sin | 15 | NA |
| 300 | 34.58 | radiation | 30 | 4320 | < th | dose independent | rect. | 15 | 18 |
| 341 | 34.62 | radiation | 10 | 1440 | < th | dose independent | sin | 18 | NA |
| 402 | 34.65 | radiation | 10 | 1440 | < th | dose independent | rect. | 13 | 6 |
| 410 | 34.65 | radiation | 10 | 1440 | < th | dose independent | rect. | 13 | 12 |
| 506 | 34.77 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 572 | 34.82 | atmosphere | 1005 | 14400 | > th | dose independent | sin | 17 | NA |
| 575 | 34.82 | radiation | 30 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 590 | 34.83 | radiation | 30 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 659 | 34.89 | atmosphere | 1005 | 14400 | < th | dose independent | sin | 18 | NA |
| 730 | 34.92 | radiation | 1 | 1440 | > th | dose dependent | rect. | 8 | 4 |
| 836 | 35.01 | wind | 9 | 43200 | < th | dose independent | rect. | 16 | 15 |
| 933 | 35.04 | wind | 9 | 43200 | > th | dose independent | rect. | 16 | 15 |
| 967 | 35.05 | radiation | 1 | 1440 | > th | dose dependent | rect. | 15 | 21 |