Os03g0423300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Stearoyl-acyl carrier protein desaturse (EC 1.14.99.6) (Fragment).
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Os03g0423300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Stearoyl-acyl carrier protein desaturse (EC 1.14.99.6) (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 568.85 | 1.12 | 4.32 | 3.23 | 4.28 | -2.96 | 1.65 | 7.16 | 0.734 | 10.9 | 15.8 | 696 | 18.4 | 17.8 |
| 619.13 | 1.16 | 4.46 | 2.42 | 3.71 | -3.15 | 2.14 | -- | 0.581 | 11.2 | 6.902 | 6403 | 18.3 | 19 |
| 573.85 | 1.12 | 4.31 | 3.35 | 4.58 | -3.08 | -- | 8.39 | 0.751 | 11.2 | 15.41 | 637 | 19.8 | 17.1 |
| 633.02 | 1.17 | 4.48 | 2.43 | 3.74 | -2.89 | -- | -- | 0.394 | 11.3 | 6.527 | 6237 | 21.8 | 18.2 |
| 1228.72 | 1.63 | 4.65 | 3.48 | -- | -4.24 | -- | 1.12 | 0.512 | -- | 10.98 | 3968 | 5.32 | 18.7 |
| 740.98 | 1.28 | 4.64 | 1.01 | 3.52 | -- | 2.49 | -- | -0.207 | 11.3 | -- | -- | -- | -- |
| 767.68 | 1.3 | 4.63 | 1.11 | 3.51 | -- | -- | -- | -0.197 | 11.3 | -- | -- | -- | -- |
| 679.4 | 1.21 | 4.72 | 1.63 | -- | -4.87 | -- | -- | 0.0591 | -- | -4.214 | 564 | 10.3 | 17.7 |
| 724.16 | 1.25 | 4.61 | -- | 3.88 | -2.18 | -- | -- | -0.0717 | 11.4 | 6.276 | 1813 | 22.8 | 18.6 |
| 1537.12 | 1.83 | 4.72 | 1.02 | -- | -- | -- | -- | -0.231 | -- | -- | -- | -- | -- |
| 800.1 | 1.32 | 4.66 | -- | 3.49 | -- | -- | -- | -0.32 | 11.3 | -- | -- | -- | -- |
| 738.4 | 1.27 | 4.57 | -- | -- | -4.6 | -- | -- | -0.0742 | -- | -31.6 | 2402 | 10.7 | 8.58 |
| 1564.58 | 1.85 | 4.74 | -- | -- | -- | -- | -- | -0.344 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 568.88 | humidity | 90 | 14400 | > th | dose dependent | rect. | 10 | 20 |
| 4 | 569.11 | humidity | 90 | 14400 | > th | dose dependent | rect. | 14 | 16 |
| 14 | 570.21 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 21 |
| 45 | 572.17 | temperature | 15 | 720 | > th | dose dependent | rect. | 18 | 18 |
| 63 | 572.96 | humidity | 90 | 14400 | > th | dose dependent | sin | 13 | NA |
| 92 | 573.82 | humidity | 90 | 14400 | > th | dose dependent | sin | 6 | NA |
| 110 | 574.29 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 22 |
| 118 | 574.50 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 19 |
| 174 | 575.53 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 203 | 576.64 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 3 |
| 207 | 576.73 | temperature | 15 | 720 | > th | dose dependent | sin | 8 | NA |
| 208 | 576.73 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 6 |
| 217 | 576.93 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 231 | 577.87 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 237 | 578.17 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 3 |
| 252 | 578.76 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 3 |
| 272 | 579.69 | temperature | 25 | 720 | < th | dose dependent | rect. | 20 | 19 |
| 323 | 580.97 | temperature | 25 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 341 | 581.41 | humidity | 90 | 14400 | > th | dose independent | rect. | 12 | 18 |
| 346 | 581.53 | humidity | 90 | 14400 | > th | dose independent | rect. | 14 | 16 |
| 349 | 581.56 | humidity | 90 | 14400 | > th | dose independent | rect. | 10 | 20 |
| 366 | 582.04 | temperature | 25 | 4320 | > th | dose independent | rect. | 11 | 4 |
| 367 | 582.06 | temperature | 15 | 1440 | > th | dose dependent | rect. | 22 | 8 |
| 369 | 582.10 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 374 | 582.18 | temperature | 30 | 1440 | < th | dose dependent | rect. | 22 | 8 |
| 377 | 582.21 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 13 |
| 419 | 582.55 | humidity | 90 | 14400 | > th | dose independent | rect. | 22 | 17 |
| 431 | 582.71 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 10 |
| 453 | 582.95 | temperature | 25 | 720 | < th | dose dependent | sin | 8 | NA |
| 490 | 583.22 | humidity | 90 | 14400 | > th | dose independent | sin | 9 | NA |
| 591 | 583.99 | humidity | 90 | 14400 | < th | dose independent | rect. | 18 | 10 |
| 616 | 584.15 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 622 | 584.23 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 7 |
| 650 | 584.59 | temperature | 25 | 4320 | < th | dose independent | rect. | 11 | 3 |
| 662 | 584.70 | temperature | 25 | 4320 | > th | dose independent | rect. | 11 | 7 |
| 696 | 585.03 | temperature | 30 | 1440 | < th | dose dependent | sin | 10 | NA |
| 727 | 585.34 | humidity | 90 | 14400 | < th | dose independent | rect. | 14 | 14 |
| 765 | 585.60 | humidity | 90 | 14400 | < th | dose independent | rect. | 12 | 17 |
| 781 | 585.70 | humidity | 90 | 14400 | > th | dose independent | rect. | 22 | 21 |
| 802 | 585.88 | humidity | 90 | 14400 | < th | dose independent | rect. | 10 | 19 |
| 877 | 586.56 | temperature | 25 | 4320 | < th | dose independent | rect. | 11 | 7 |
| 941 | 587.16 | humidity | 90 | 14400 | > th | dose independent | rect. | 22 | 2 |
| 960 | 587.33 | humidity | 90 | 14400 | < th | dose independent | sin | 12 | NA |