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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os08g0199400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Stearoyl-acyl carrier protein desaturse (EC 1.14.99.6) (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.67 (0.0576) R2 : 0.312
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.44 (0.145) R2dC : 0.155 R2C : 0.196
β3 : 2.95 (0.343) R2dE : 0.116 R2E : 0.157
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.00322 (0.122) R2dN8 : 1.27e-06 R2N8 : -0.000926
σ : 1.08
deviance : 536.11
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_____
C
peak time of C : 9.05
E
wheather : wind
threshold : 1.237
memory length : 50
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 4.2
open length of G : 1.16

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
530.68 1.08 3.74 -0.682 1.45 4.66 0.654 -17.4 0.005 9.07 0.9873 78 3.98 1.05
541.62 1.08 3.66 0.0123 1.5 3.43 1.01 -- 0.157 8.93 1.3 54 4.23 1.13
532.16 1.07 3.74 -0.652 1.45 4.66 -- -17.2 0.00824 9.06 0.9967 78 3.97 1.07
536.06 1.08 3.67 -0.0405 1.44 2.96 -- -- -0.00713 9.06 1.235 50 4.2 1.15
649.28 1.19 3.77 -0.65 -- 4.97 -- -15.8 0.0338 -- 0.9032 79 3.97 1.1
612.35 1.16 3.69 0.0572 1.72 -- 1 -- -0.111 8.24 -- -- -- --
615.44 1.16 3.69 0.0868 1.72 -- -- -- -0.112 8.24 -- -- -- --
650.6 1.19 3.7 -0.0745 -- 3.34 -- -- 0.0304 -- 1.275 52 4.16 1.27
536.11 1.08 3.67 -- 1.44 2.95 -- -- -0.00322 9.05 1.237 50 4.2 1.16
778.51 1.3 3.73 0.0992 -- -- -- -- -0.0924 -- -- -- -- --
615.64 1.16 3.69 -- 1.72 -- -- -- -0.121 8.23 -- -- -- --
650.66 1.19 3.7 -- -- 3.36 -- -- 0.0375 -- 1.256 52 4.17 1.25
778.77 1.3 3.73 -- -- -- -- -- -0.103 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 536.83 wind 1 90 < th dose independent rect. 4 1
2 539.43 wind 1 90 < th dose dependent rect. 4 1
3 542.89 wind 9 14400 < th dose independent rect. 17 21
4 543.03 wind 9 14400 > th dose independent rect. 17 21
5 543.07 wind 9 14400 < th dose independent rect. 20 18
6 543.40 wind 9 14400 > th dose dependent rect. 16 23
7 543.51 wind 9 14400 > th dose independent rect. 19 18
17 544.93 wind 7 14400 > th dose dependent rect. 20 18
18 544.94 wind 9 14400 > th dose dependent rect. 24 23
23 545.08 wind 1 720 < th dose dependent rect. 4 1
24 545.12 wind 9 14400 > th dose dependent rect. 3 20
26 545.20 wind 9 14400 > th dose dependent rect. 5 18
29 545.22 wind 9 14400 > th dose dependent rect. 22 23
30 545.25 wind 9 14400 > th dose dependent rect. 5 23
31 545.26 wind 9 14400 > th dose dependent no NA NA
32 545.26 wind 9 14400 > th dose dependent rect. 3 23
33 545.26 wind 9 14400 > th dose dependent rect. 9 23
40 545.34 wind 9 14400 > th dose dependent rect. 5 21
57 545.43 wind 9 14400 > th dose dependent rect. 13 23
58 545.44 wind 9 14400 > th dose dependent rect. 9 14
73 545.58 wind 9 14400 > th dose dependent rect. 9 17
94 545.93 wind 9 14400 > th dose dependent rect. 20 23
137 546.86 wind 9 14400 < th dose independent rect. 24 23
140 547.01 wind 9 14400 < th dose independent rect. 4 19
142 547.02 wind 9 14400 < th dose independent rect. 9 23
145 547.08 wind 9 14400 < th dose independent rect. 4 22
149 547.14 wind 9 14400 > th dose dependent sin 18 NA
158 547.28 wind 9 14400 < th dose independent rect. 9 21
163 547.31 wind 9 14400 < th dose independent rect. 7 23
172 547.41 wind 9 14400 < th dose independent no NA NA
207 547.90 wind 9 14400 < th dose independent rect. 13 23
208 547.94 wind 9 14400 < th dose independent rect. 9 14
209 547.94 wind 9 14400 < th dose independent rect. 7 16
211 547.99 wind 9 14400 < th dose independent rect. 9 17
212 547.99 wind 9 14400 < th dose independent rect. 7 19
239 548.25 wind 3 30 < th dose dependent rect. 4 3
303 549.18 wind 9 14400 < th dose independent sin 7 NA
309 549.22 wind 9 14400 > th dose independent rect. 24 23
334 549.51 wind 7 14400 > th dose dependent sin 5 NA
337 549.53 wind 9 14400 > th dose independent no NA NA
339 549.53 wind 9 14400 > th dose independent rect. 3 23
340 549.53 wind 9 14400 > th dose independent rect. 9 23
346 549.57 wind 9 14400 > th dose independent rect. 7 23
356 549.62 wind 9 14400 > th dose independent rect. 5 23
357 549.63 wind 9 14400 > th dose independent rect. 22 23
360 549.66 wind 9 14400 > th dose independent rect. 3 20
433 550.13 wind 9 14400 > th dose independent rect. 9 17
444 550.20 wind 9 14400 < th dose independent sin 18 NA
457 550.29 wind 9 14400 > th dose independent rect. 9 14
483 550.55 wind 9 14400 > th dose independent rect. 19 23
535 551.01 wind 9 14400 > th dose independent sin 8 NA
551 551.16 wind 9 14400 > th dose independent sin 17 NA
591 551.76 humidity 70 1440 < th dose independent rect. 17 3
610 551.86 wind 7 14400 > th dose independent sin 4 NA
611 551.86 humidity 80 1440 < th dose dependent rect. 17 1
629 552.12 wind 7 14400 > th dose dependent rect. 24 16
642 552.27 wind 7 14400 > th dose independent rect. 24 16
655 552.44 humidity 90 90 > th dose dependent rect. 4 1
722 553.38 humidity 90 90 > th dose independent rect. 4 1
763 553.79 wind 1 720 < th dose independent rect. 4 1
774 553.92 humidity 50 4320 < th dose independent sin 9 NA
785 554.03 wind 7 14400 < th dose independent rect. 24 16
787 554.05 humidity 70 1440 > th dose independent rect. 18 11
793 554.12 humidity 70 1440 > th dose independent rect. 18 2
799 554.16 wind 7 14400 < th dose independent sin 4 NA
843 554.62 wind 7 14400 > th dose dependent rect. 4 10
959 555.69 wind 7 14400 > th dose independent rect. 6 10
990 555.81 radiation 20 1440 < th dose dependent rect. 18 11