BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0322500 Os03g0322500|AK121029
(129 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0322500 Similar to 14 kDa zinc-binding protein (Protei... 265 7e-72
Os06g0667500 Similar to 14 kDa zinc-binding protein (Protei... 157 2e-39
D21291 145 6e-36
Os01g0813000 Histidine triad (HIT) protein family protein 73 7e-14
>Os03g0322500 Similar to 14 kDa zinc-binding protein (Protein kinase C inhibitor)
(PKCI)
Length = 129
Score = 265 bits (677), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 129/129 (100%), Positives = 129/129 (100%)
Query: 1 MASEKEAALAAVPNDNPTIFDKIIKKEIPSTVVFDDEKVLAFRDINPQAPTHIVIIPKVK 60
MASEKEAALAAVPNDNPTIFDKIIKKEIPSTVVFDDEKVLAFRDINPQAPTHIVIIPKVK
Sbjct: 1 MASEKEAALAAVPNDNPTIFDKIIKKEIPSTVVFDDEKVLAFRDINPQAPTHIVIIPKVK 60
Query: 61 DGLTGLSKAEERHVEILGYLLYVAKVVAKQEGLEDGYRIVINDGPSGCQSVYHIHVHLLG 120
DGLTGLSKAEERHVEILGYLLYVAKVVAKQEGLEDGYRIVINDGPSGCQSVYHIHVHLLG
Sbjct: 61 DGLTGLSKAEERHVEILGYLLYVAKVVAKQEGLEDGYRIVINDGPSGCQSVYHIHVHLLG 120
Query: 121 GRQMNWPPG 129
GRQMNWPPG
Sbjct: 121 GRQMNWPPG 129
>Os06g0667500 Similar to 14 kDa zinc-binding protein (Protein kinase C inhibitor)
(PKCI)
Length = 91
Score = 157 bits (397), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 68/91 (74%), Positives = 83/91 (91%)
Query: 39 VLAFRDINPQAPTHIVIIPKVKDGLTGLSKAEERHVEILGYLLYVAKVVAKQEGLEDGYR 98
VLAFRDINPQAP H+++IPK++DGLTGL KAE RHVEILGYLLY AK+VA++EG+ +GYR
Sbjct: 1 VLAFRDINPQAPVHVLVIPKIRDGLTGLDKAEPRHVEILGYLLYAAKIVAEKEGIAEGYR 60
Query: 99 IVINDGPSGCQSVYHIHVHLLGGRQMNWPPG 129
+VIN+GP GCQSVYH+H+H+LGGRQM WP G
Sbjct: 61 VVINNGPKGCQSVYHLHLHVLGGRQMKWPAG 91
>D21291
Length = 121
Score = 145 bits (367), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 76/106 (71%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Query: 14 NDNPTIFDKIIKKEIPSTVVFDDEKVLAFRDINPQAPTHIVIIPKVKDGLTGLSKAEERH 73
NDNPTIFDKIIKKEIPSTVVFDDEKVLAFRDINPQAPTHIVIIP VKDGLTGLSKAEERH
Sbjct: 16 NDNPTIFDKIIKKEIPSTVVFDDEKVLAFRDINPQAPTHIVIIPXVKDGLTGLSKAEERH 75
Query: 74 VEILGYLLYVAKVVAKQEG-LEDGYRIVINDGPSGCQSVYHIHVHL 118
VEILGYLLY + K+ G L+ + GP +VHL
Sbjct: 76 VEILGYLLYCCQSCCKEGGTLKMATVLSSMXGPXXAXXFTTYNVHL 121
>Os01g0813000 Histidine triad (HIT) protein family protein
Length = 56
Score = 72.8 bits (177), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 38/41 (92%)
Query: 69 AEERHVEILGYLLYVAKVVAKQEGLEDGYRIVINDGPSGCQ 109
AEERHVE++G+LLY AK +AKQE L+DG+RIVINDGP+GC+
Sbjct: 1 AEERHVEVMGHLLYAAKTIAKQENLDDGFRIVINDGPNGCE 41
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.138 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,703,895
Number of extensions: 180434
Number of successful extensions: 347
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 347
Number of HSP's successfully gapped: 4
Length of query: 129
Length of database: 17,035,801
Length adjustment: 89
Effective length of query: 40
Effective length of database: 12,388,755
Effective search space: 495550200
Effective search space used: 495550200
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 150 (62.4 bits)