Os06g0667500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to 14 kDa zinc-binding protein (Protein kinase C inhibitor) (PKCI).
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Os06g0667500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to 14 kDa zinc-binding protein (Protein kinase C inhibitor) (PKCI).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26.63 | 0.242 | 13.1 | -0.661 | 0.371 | 0.641 | -0.224 | 0.824 | -0.481 | 21.7 | 26.41 | 669 | -- | -- |
| 27.57 | 0.245 | 13.1 | -0.796 | 0.386 | 0.679 | -0.0903 | -- | -0.498 | 21.5 | 26.7 | 703 | -- | -- |
| 26.52 | 0.24 | 13.1 | -0.675 | 0.386 | 0.629 | -- | 0.735 | -0.496 | 22.2 | 26.48 | 590 | -- | -- |
| 27.05 | 0.242 | 13.1 | -0.831 | 0.342 | 0.7 | -- | -- | -0.585 | 21.9 | 25.99 | 628 | -- | -- |
| 32.7 | 0.266 | 13.1 | -0.772 | -- | 0.851 | -- | 0.535 | -0.535 | -- | 26.4 | 656 | -- | -- |
| 41.72 | 0.303 | 13.1 | -0.63 | 0.71 | -- | 0.121 | -- | -0.378 | 20.8 | -- | -- | -- | -- |
| 41.77 | 0.303 | 13.1 | -0.634 | 0.71 | -- | -- | -- | -0.378 | 20.8 | -- | -- | -- | -- |
| 32.2 | 0.264 | 13.1 | -0.911 | -- | 0.904 | -- | -- | -0.646 | -- | 25.98 | 679 | -- | -- |
| 44.29 | 0.31 | 13.1 | -- | 0.466 | 0.468 | -- | -- | -0.452 | 21.7 | 25.7 | 517 | -- | -- |
| 70.36 | 0.392 | 13.1 | -0.635 | -- | -- | -- | -- | -0.384 | -- | -- | -- | -- | -- |
| 52.38 | 0.339 | 13.1 | -- | 0.712 | -- | -- | -- | -0.308 | 20.7 | -- | -- | -- | -- |
| 52.83 | 0.339 | 13.1 | -- | -- | 0.745 | -- | -- | -0.508 | -- | 25.89 | 636 | -- | -- |
| 81.01 | 0.42 | 13 | -- | -- | -- | -- | -- | -0.314 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 26.23 | temperature | 20 | 270 | > th | dose dependent | rect. | 8 | 20 |
| 2 | 26.34 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 20 |
| 5 | 26.57 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 22 |
| 15 | 26.84 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 16 |
| 31 | 27.00 | temperature | 30 | 720 | < th | dose dependent | sin | 23 | NA |
| 50 | 27.24 | temperature | 20 | 270 | > th | dose dependent | rect. | 19 | 22 |
| 51 | 27.25 | temperature | 20 | 270 | > th | dose dependent | rect. | 21 | 20 |
| 87 | 27.57 | temperature | 10 | 270 | > th | dose dependent | rect. | 20 | 23 |
| 104 | 27.69 | temperature | 20 | 1440 | > th | dose dependent | rect. | 9 | 3 |
| 106 | 27.70 | temperature | 10 | 1440 | > th | dose dependent | rect. | 9 | 3 |
| 113 | 27.75 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 119 | 27.77 | temperature | 30 | 1440 | < th | dose dependent | rect. | 9 | 3 |
| 140 | 27.89 | temperature | 25 | 720 | > th | dose independent | rect. | 6 | 15 |
| 142 | 27.89 | temperature | 15 | 1440 | > th | dose dependent | rect. | 9 | 5 |
| 152 | 27.94 | temperature | 25 | 720 | < th | dose independent | rect. | 5 | 16 |
| 198 | 28.06 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 215 | 28.11 | temperature | 25 | 720 | > th | dose independent | rect. | 6 | 18 |
| 285 | 28.20 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 20 |
| 333 | 28.25 | temperature | 20 | 720 | > th | dose dependent | rect. | 5 | 19 |
| 396 | 28.33 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 404 | 28.33 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 16 |
| 408 | 28.34 | temperature | 20 | 1440 | > th | dose dependent | sin | 23 | NA |
| 490 | 28.40 | temperature | 10 | 1440 | > th | dose dependent | sin | 23 | NA |
| 638 | 28.51 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 804 | 28.65 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 818 | 28.66 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 835 | 28.67 | temperature | 25 | 720 | < th | dose independent | sin | 23 | NA |
| 905 | 28.72 | temperature | 20 | 720 | > th | dose dependent | rect. | 13 | 23 |
| 978 | 28.78 | temperature | 25 | 720 | > th | dose independent | sin | 23 | NA |