Os03g0322500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to 14 kDa zinc-binding protein (Protein kinase C inhibitor) (PKCI).
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Os03g0322500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to 14 kDa zinc-binding protein (Protein kinase C inhibitor) (PKCI).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.86 | 0.293 | 12.9 | -1.19 | 0.743 | 0.431 | 0.715 | -0.755 | -0.0835 | 1.31 | 21.09 | 669 | -- | -- |
| 39.25 | 0.292 | 12.9 | -1.03 | 0.742 | 0.375 | 0.699 | -- | -0.0358 | 1.3 | 21.48 | 704 | -- | -- |
| 40.87 | 0.298 | 12.9 | -1.18 | 0.751 | 0.434 | -- | -0.622 | -0.0814 | 1.42 | 21.57 | 652 | -- | -- |
| 40.98 | 0.298 | 12.9 | -1.05 | 0.719 | 0.37 | -- | -- | -0.0365 | 1.22 | 22.1 | 781 | -- | -- |
| 67.94 | 0.384 | 12.9 | -1.27 | -- | 0.713 | -- | -0.781 | -0.0981 | -- | 24 | 983 | -- | -- |
| 42.11 | 0.304 | 12.9 | -0.924 | 0.774 | -- | 0.672 | -- | 0.0301 | 0.667 | -- | -- | -- | -- |
| 44.04 | 0.311 | 12.9 | -0.949 | 0.772 | -- | -- | -- | 0.0267 | 0.677 | -- | -- | -- | -- |
| 68.33 | 0.385 | 12.9 | -1.12 | -- | 0.655 | -- | -- | -0.0636 | -- | 23.94 | 987 | -- | -- |
| 67.3 | 0.384 | 12.9 | -- | 0.701 | -0.171 | -- | -- | 0.156 | 0.445 | 22.1 | 781 | -- | -- |
| 81.38 | 0.422 | 12.9 | -0.922 | -- | -- | -- | -- | 0.0403 | -- | -- | -- | -- | -- |
| 67.8 | 0.385 | 12.9 | -- | 0.758 | -- | -- | -- | 0.132 | 0.618 | -- | -- | -- | -- |
| 90.25 | 0.444 | 12.9 | -- | -- | -0.72 | -- | -- | 0.214 | -- | 23.94 | 987 | -- | -- |
| 103.8 | 0.476 | 12.9 | -- | -- | -- | -- | -- | 0.143 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 37.69 | atmosphere | 995 | 270 | > th | dose dependent | rect. | 19 | 8 |
| 2 | 37.84 | atmosphere | 1000 | 90 | > th | dose dependent | rect. | 22 | 5 |
| 4 | 37.90 | radiation | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 10 | 38.01 | radiation | 10 | 10 | < th | dose independent | rect. | 3 | 23 |
| 18 | 38.12 | atmosphere | 1005 | 90 | > th | dose dependent | rect. | 13 | 14 |
| 28 | 38.20 | atmosphere | 1000 | 270 | > th | dose dependent | rect. | 22 | 2 |
| 32 | 38.22 | atmosphere | 1005 | 270 | > th | dose dependent | rect. | 11 | 16 |
| 44 | 38.30 | temperature | 30 | 90 | < th | dose dependent | rect. | 14 | 13 |
| 53 | 38.34 | humidity | 80 | 1440 | > th | dose independent | rect. | 20 | 1 |
| 89 | 38.41 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 14 |
| 95 | 38.44 | radiation | 10 | 10 | < th | dose independent | rect. | 3 | 19 |
| 96 | 38.44 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 101 | 38.45 | radiation | 1 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 106 | 38.48 | humidity | 80 | 1440 | > th | dose independent | rect. | 19 | 10 |
| 123 | 38.50 | temperature | 10 | 270 | > th | dose dependent | rect. | 15 | 16 |
| 124 | 38.51 | humidity | 80 | 1440 | > th | dose independent | rect. | 19 | 7 |
| 126 | 38.51 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 10 |
| 168 | 38.57 | radiation | 30 | 10 | < th | dose dependent | rect. | 3 | 19 |
| 174 | 38.58 | temperature | 15 | 10 | > th | dose dependent | rect. | 16 | 16 |
| 178 | 38.59 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 179 | 38.59 | temperature | 30 | 30 | < th | dose dependent | rect. | 22 | 5 |
| 185 | 38.61 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 187 | 38.61 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 195 | 38.62 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 19 |
| 244 | 38.69 | temperature | 30 | 270 | < th | dose dependent | rect. | 17 | 8 |
| 247 | 38.69 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 10 |
| 253 | 38.70 | atmosphere | 1005 | 270 | > th | dose dependent | sin | 16 | NA |
| 272 | 38.72 | temperature | 30 | 270 | < th | dose dependent | rect. | 19 | 6 |
| 293 | 38.74 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 296 | 38.74 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 2 |
| 302 | 38.74 | temperature | 20 | 720 | > th | dose dependent | rect. | 9 | 12 |
| 308 | 38.75 | temperature | 30 | 30 | < th | dose dependent | sin | 14 | NA |
| 324 | 38.76 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 336 | 38.77 | radiation | 10 | 10 | < th | dose independent | rect. | 6 | 16 |
| 358 | 38.78 | temperature | 15 | 270 | > th | dose dependent | rect. | 13 | 9 |
| 400 | 38.80 | atmosphere | 1015 | 270 | < th | dose dependent | rect. | 15 | 16 |
| 408 | 38.81 | temperature | 20 | 10 | > th | dose dependent | rect. | 16 | 10 |
| 419 | 38.82 | temperature | 20 | 720 | > th | dose dependent | sin | 22 | NA |
| 420 | 38.82 | temperature | 30 | 270 | < th | dose dependent | sin | 17 | NA |
| 472 | 38.85 | temperature | 15 | 30 | > th | dose dependent | sin | 13 | NA |
| 473 | 38.85 | temperature | 25 | 1440 | > th | dose dependent | rect. | 14 | 4 |
| 520 | 38.87 | temperature | 10 | 1440 | > th | dose dependent | rect. | 14 | 8 |
| 536 | 38.88 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 6 |
| 557 | 38.89 | humidity | 80 | 1440 | < th | dose independent | rect. | 19 | 9 |
| 560 | 38.89 | temperature | 25 | 1440 | > th | dose dependent | rect. | 14 | 1 |
| 561 | 38.89 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 585 | 38.89 | radiation | 20 | 10 | < th | dose dependent | rect. | 6 | 16 |
| 691 | 38.93 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 701 | 38.93 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 10 |
| 708 | 38.93 | atmosphere | 1005 | 720 | > th | dose dependent | rect. | 15 | 4 |
| 713 | 38.93 | humidity | 80 | 14400 | > th | dose dependent | rect. | 20 | 8 |
| 736 | 38.94 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 738 | 38.94 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 7 |
| 766 | 38.94 | temperature | 25 | 720 | > th | dose dependent | rect. | 9 | 20 |
| 769 | 38.94 | temperature | 20 | 720 | > th | dose dependent | rect. | 9 | 22 |
| 804 | 38.96 | wind | 7 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 816 | 38.96 | humidity | 70 | 30 | > th | dose dependent | rect. | 22 | 5 |
| 833 | 38.96 | temperature | 20 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 834 | 38.97 | radiation | 1 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 835 | 38.97 | atmosphere | 1000 | 90 | > th | dose independent | rect. | 22 | 5 |
| 877 | 38.97 | temperature | 20 | 720 | > th | dose dependent | rect. | 16 | 23 |
| 878 | 38.98 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 931 | 38.99 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 970 | 39.00 | humidity | 80 | 1440 | > th | dose independent | sin | 13 | NA |
| 974 | 39.00 | temperature | 20 | 720 | > th | dose dependent | no | NA | NA |
| 978 | 39.00 | atmosphere | 1005 | 720 | > th | dose dependent | rect. | 15 | 1 |
| 985 | 39.00 | temperature | 20 | 10 | > th | dose dependent | rect. | 16 | 8 |
| 989 | 39.00 | radiation | 1 | 14400 | < th | dose dependent | rect. | 7 | 10 |