BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0307300 Os03g0307300|AK112069
(332 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0307300 Nicotianamine synthase 1 (EC 2.5.1.43) (S-aden... 610 e-175
Os03g0307200 Nicotianamine synthase 2 (EC 2.5.1.43) (S-aden... 548 e-156
Os07g0689600 Nicotianamine synthase 3 (EC 2.5.1.43) (S-aden... 382 e-106
>Os03g0307300 Nicotianamine synthase 1 (EC 2.5.1.43) (S-adenosyl-L-methionine:S-
adenosyl-L-methionine:S-adenosyl-methionine 3-amino-3-
carboxypropyltransferase 1) (OsNAS1)
Length = 332
Score = 610 bits (1574), Expect = e-175, Method: Compositional matrix adjust.
Identities = 309/332 (93%), Positives = 309/332 (93%)
Query: 1 MEAQNQEVAALVEKIAGLHAAISKLPSLSPSAEVDALFTDLVTACVPASPVDVAKLGPEA 60
MEAQNQEVAALVEKIAGLHAAISKLPSLSPSAEVDALFTDLVTACVPASPVDVAKLGPEA
Sbjct: 1 MEAQNQEVAALVEKIAGLHAAISKLPSLSPSAEVDALFTDLVTACVPASPVDVAKLGPEA 60
Query: 61 QAMREELIRLCSAAEGHLEAHYADMLAAFDNPLDHLARFPYYGNYVNLSKLEYDLLVRYV 120
QAMREELIRLCSAAEGHLEAHYADMLAAFDNPLDHLARFPYYGNYVNLSKLEYDLLVRYV
Sbjct: 61 QAMREELIRLCSAAEGHLEAHYADMLAAFDNPLDHLARFPYYGNYVNLSKLEYDLLVRYV 120
Query: 121 PGIAPTRVAFVGSGPLPFSSLVLAAHHLPDAVFDNYDRCGAANERARRLFRGADEGLGAR 180
PGIAPTRVAFVGSGPLPFSSLVLAAHHLPDAVFDNYDRCGAANERARRLFRGADEGLGAR
Sbjct: 121 PGIAPTRVAFVGSGPLPFSSLVLAAHHLPDAVFDNYDRCGAANERARRLFRGADEGLGAR 180
Query: 181 MAFHTADVATLTGELGAYDVVFLAALVGMAAEEKAGVIAHLGAHMADGAALVVRSAHGAR 240
MAFHTADVATLTGELGAYDVVFLAALVGMAAEEKAGVIAHLGAHMADGAALVVRSAHGAR
Sbjct: 181 MAFHTADVATLTGELGAYDVVFLAALVGMAAEEKAGVIAHLGAHMADGAALVVRSAHGAR 240
Query: 241 GFLYPIVDPEDVRRGGFDVLAVCHPEDEVINSVIVARKVGXXXXXXXXRRDELADSRGVV 300
GFLYPIVDPEDVRRGGFDVLAVCHPEDEVINSVIVARKVG RRDELADSRGVV
Sbjct: 241 GFLYPIVDPEDVRRGGFDVLAVCHPEDEVINSVIVARKVGAAAAAAAARRDELADSRGVV 300
Query: 301 LPVVGPPSTCCXXXXXXXXXXXXXXXNKELSV 332
LPVVGPPSTCC NKELSV
Sbjct: 301 LPVVGPPSTCCKVEASAVEKAEEFAANKELSV 332
>Os03g0307200 Nicotianamine synthase 2 (EC 2.5.1.43) (S-adenosyl-L-methionine:S-
adenosyl-L-methionine:S-adenosyl-methionine 3-amino-3-
carboxypropyltransferase 2) (OsNAS2)
Length = 326
Score = 548 bits (1412), Expect = e-156, Method: Compositional matrix adjust.
Identities = 280/311 (90%), Positives = 283/311 (90%), Gaps = 7/311 (2%)
Query: 1 MEAQNQEVAALVEKIAGLHAAISKLPSLSPSAEVDALFTDLVTACVPASPVDVAKLGPEA 60
MEAQNQEV ALVEKIAGLHAAISKLPSLSPSAEVDALFTDLVTACVPASPVDVAKLGPEA
Sbjct: 1 MEAQNQEVTALVEKIAGLHAAISKLPSLSPSAEVDALFTDLVTACVPASPVDVAKLGPEA 60
Query: 61 QAMREELIRLCSAAEGHLEAHYADMLAAFDNPLDHLARFPYYGNYVNLSKLEYDLLVRYV 120
QAMREELIRLCSAAEGHLEAHYADMLAAFDNPLDHLARFPYYGNYVNLSKLEYDLLVRYV
Sbjct: 61 QAMREELIRLCSAAEGHLEAHYADMLAAFDNPLDHLARFPYYGNYVNLSKLEYDLLVRYV 120
Query: 121 PGIAPTRVAFVGSGPLPFSSLVLAAHHLPDAVFDNYDRCGAANERARRLFRGADEGLGAR 180
PGIAPTRVAFVGSGPLPFSSLVLAAHHLPDAVFDNYDRCGAANERARRLFRGADEGLGAR
Sbjct: 121 PGIAPTRVAFVGSGPLPFSSLVLAAHHLPDAVFDNYDRCGAANERARRLFRGADEGLGAR 180
Query: 181 MAFHTADVATLTGELGAYDVVFLAALVGMAAEEKAGVIAHLGAHMADGAALVVRSAHGAR 240
MAFHTADVATLTGELGAYDVVFLAALVGMAAEEKAGVIAHLGAHMADGAALVVRSAHGAR
Sbjct: 181 MAFHTADVATLTGELGAYDVVFLAALVGMAAEEKAGVIAHLGAHMADGAALVVRSAHGAR 240
Query: 241 GFLYPIVDPEDVRRGGFDVLAVCHPEDEVINSVIVARKVGXXXXXXXXRRDELADSRGVV 300
GFLYPIVD ED+RRGGFDVLAV HP+DEVINSVIVARK
Sbjct: 241 GFLYPIVDLEDIRRGGFDVLAVYHPDDEVINSVIVARKADPRRG-------GGLAGARGA 293
Query: 301 LPVVGPPSTCC 311
+PVV PP CC
Sbjct: 294 VPVVSPPCKCC 304
>Os07g0689600 Nicotianamine synthase 3 (EC 2.5.1.43) (S-adenosyl-L-methionine:S-
adenosyl-L-methionine:S-adenosyl-methionine 3-amino-3-
carboxypropyltransferase 3) (OsNAS3)
Length = 343
Score = 382 bits (982), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/269 (72%), Positives = 221/269 (82%), Gaps = 2/269 (0%)
Query: 11 LVEKIAGLHAAISKLPSLSPSAEVDALFTDLVTACVPASPVDVAKLGPEAQAMREELIRL 70
LVEKI GL AAI KLPSLSPS EV+ALFT+LV C+P S VDV +LG EAQ MR LIRL
Sbjct: 25 LVEKITGLAAAIGKLPSLSPSPEVNALFTELVMTCIPPSSVDVEQLGAEAQDMRGRLIRL 84
Query: 71 CSAAEGHLEAHYADMLAAFDNPLDHLARFPYYGNYVNLSKLEYDLLVRYVPGIAP-TRVA 129
C+ AEGHLEAHY+D+LAA DNPLDHLA FPY+ NY+ L++LEY LL R++P P +R+A
Sbjct: 85 CADAEGHLEAHYSDVLAAHDNPLDHLALFPYFNNYIQLAQLEYALLARHLPAAPPPSRLA 144
Query: 130 FVGSGPLPFSSLVLAAHHLPDAVFDNYDRCGAANERARRLFRGADEGLGARMAFHTADVA 189
F+GSGPLP SSLVLAA HLP A F NYD C AN RA RL R AD L ARMAFHT+DVA
Sbjct: 145 FLGSGPLPLSSLVLAARHLPAASFHNYDICADANRRASRLVR-ADRDLSARMAFHTSDVA 203
Query: 190 TLTGELGAYDVVFLAALVGMAAEEKAGVIAHLGAHMADGAALVVRSAHGARGFLYPIVDP 249
+T +L AYDVVFLAALVGMAAEEKA ++ HLG HMA GAALVVRSAHGARGFLYP+VDP
Sbjct: 204 HVTTDLAAYDVVFLAALVGMAAEEKARMVEHLGKHMAPGAALVVRSAHGARGFLYPVVDP 263
Query: 250 EDVRRGGFDVLAVCHPEDEVINSVIVARK 278
E++RRGGFDVLAV HPE EVINSVI+ARK
Sbjct: 264 EEIRRGGFDVLAVHHPEGEVINSVIIARK 292
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.137 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,702,129
Number of extensions: 447905
Number of successful extensions: 1087
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 1084
Number of HSP's successfully gapped: 3
Length of query: 332
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 231
Effective length of database: 11,762,187
Effective search space: 2717065197
Effective search space used: 2717065197
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 156 (64.7 bits)