BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0290300 Os03g0290300|AK058242
(276 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0290300 Similar to W-3 fatty acid desaturase (Fragment) 566 e-162
Os07g0693800 Similar to Fatty acid desaturase (Fragment) 464 e-131
Os12g0104400 Fatty acid acyl-CoA desaturase family protein 432 e-121
Os11g0104400 Similar to W-3 fatty acid desaturase (Fragment) 412 e-115
Os02g0716500 Similar to Delta-12 fatty acid desaturase (Fra... 155 3e-38
Os07g0417200 Similar to Delta 12 oleic acid desaturase FAD2 152 2e-37
Os07g0416900 Similar to Omega-6 fatty acid desaturase, endo... 151 5e-37
Os06g0357100 69 6e-12
Os08g0440900 Similar to Omega-6 fatty acid desaturase, chlo... 67 2e-11
>Os03g0290300 Similar to W-3 fatty acid desaturase (Fragment)
Length = 276
Score = 566 bits (1460), Expect = e-162, Method: Compositional matrix adjust.
Identities = 276/276 (100%), Positives = 276/276 (100%)
Query: 1 FSSNAKLNSVVGHILHSSILVPYHGWRISHRTHHQNHGHVEKDESWQPLSERLYNSLDYM 60
FSSNAKLNSVVGHILHSSILVPYHGWRISHRTHHQNHGHVEKDESWQPLSERLYNSLDYM
Sbjct: 1 FSSNAKLNSVVGHILHSSILVPYHGWRISHRTHHQNHGHVEKDESWQPLSERLYNSLDYM 60
Query: 61 TKKLRFTMPFPMLAFPLYLFARSPGKKGSHFNPSSDLFQPNEKKDVITSTASWLAMVGIL 120
TKKLRFTMPFPMLAFPLYLFARSPGKKGSHFNPSSDLFQPNEKKDVITSTASWLAMVGIL
Sbjct: 61 TKKLRFTMPFPMLAFPLYLFARSPGKKGSHFNPSSDLFQPNEKKDVITSTASWLAMVGIL 120
Query: 121 AGLTFVMGPLKMLKLYAVPYVIFVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTL 180
AGLTFVMGPLKMLKLYAVPYVIFVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTL
Sbjct: 121 AGLTFVMGPLKMLKLYAVPYVIFVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTL 180
Query: 181 DRDYGWINNVHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYKEPEKSAPLPFHLL 240
DRDYGWINNVHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYKEPEKSAPLPFHLL
Sbjct: 181 DRDYGWINNVHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYKEPEKSAPLPFHLL 240
Query: 241 GVLAKSLNSDHYVSDTGDVVYYQTDLKTSSSAQSSD 276
GVLAKSLNSDHYVSDTGDVVYYQTDLKTSSSAQSSD
Sbjct: 241 GVLAKSLNSDHYVSDTGDVVYYQTDLKTSSSAQSSD 276
>Os07g0693800 Similar to Fatty acid desaturase (Fragment)
Length = 413
Score = 464 bits (1195), Expect = e-131, Method: Compositional matrix adjust.
Identities = 214/265 (80%), Positives = 240/265 (90%)
Query: 1 FSSNAKLNSVVGHILHSSILVPYHGWRISHRTHHQNHGHVEKDESWQPLSERLYNSLDYM 60
FS+N++LNSV+GHILHSSILVPYHGWRISHRTHHQNHGHV+KDESW PL ERLY SL+
Sbjct: 146 FSNNSRLNSVMGHILHSSILVPYHGWRISHRTHHQNHGHVDKDESWHPLPERLYRSLNRA 205
Query: 61 TKKLRFTMPFPMLAFPLYLFARSPGKKGSHFNPSSDLFQPNEKKDVITSTASWLAMVGIL 120
T+ LRF++PFPMLA+P YL++RSPGK GSHF+PSSDLFQPNE+ DV+TSTA W+AM +L
Sbjct: 206 TRMLRFSIPFPMLAYPFYLWSRSPGKSGSHFHPSSDLFQPNERNDVLTSTACWVAMAALL 265
Query: 121 AGLTFVMGPLKMLKLYAVPYVIFVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTL 180
AGLTF+MGPL ML LY VPY IFVMWLDFVTYLHHHGH DKLPWYRGKEWSYLRGGLTT+
Sbjct: 266 AGLTFLMGPLLMLNLYFVPYWIFVMWLDFVTYLHHHGHNDKLPWYRGKEWSYLRGGLTTV 325
Query: 181 DRDYGWINNVHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYKEPEKSAPLPFHLL 240
DRDYGWINN+HHDIGTHVIHHLFPQIPHYHL+EATEAAK V+GKYY+EP+KS P P HL
Sbjct: 326 DRDYGWINNIHHDIGTHVIHHLFPQIPHYHLIEATEAAKGVMGKYYREPDKSGPFPLHLF 385
Query: 241 GVLAKSLNSDHYVSDTGDVVYYQTD 265
G L++SL DHYVSDTGDVVYYQTD
Sbjct: 386 GALSRSLKRDHYVSDTGDVVYYQTD 410
>Os12g0104400 Fatty acid acyl-CoA desaturase family protein
Length = 385
Score = 432 bits (1110), Expect = e-121, Method: Compositional matrix adjust.
Identities = 200/276 (72%), Positives = 230/276 (83%), Gaps = 1/276 (0%)
Query: 1 FSSNAKLNSVVGHILHSSILVPYHGWRISHRTHHQNHGHVEKDESWQPLSERLYNSLDYM 60
FS +A LN+VVGH+LHS ILVPYHGWRISHRTHHQNHGH+EKDESW P++E+LY L+
Sbjct: 107 FSDSAMLNNVVGHLLHSFILVPYHGWRISHRTHHQNHGHIEKDESWHPITEKLYRKLETR 166
Query: 61 TKKLRFTMPFPMLAFPLYLFARSPGKKGSHFNPSSDLFQPNEKKDVITSTASWLAMVGIL 120
TKKLRFT+PFP+LAFP+YL+ RSPGK GSHF PSSDLF P EK DVI ST W M+ +L
Sbjct: 167 TKKLRFTLPFPLLAFPVYLWYRSPGKTGSHFLPSSDLFSPKEKSDVIVSTTCWCIMISLL 226
Query: 121 AGLTFVMGPLKMLKLYAVPYVIFVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTL 180
L V G + +L LY VPY++FVMWLD VTYLHHHGH D LPWYRG+EWSYLRGGLTT+
Sbjct: 227 VALACVFGSVPVLMLYGVPYLVFVMWLDLVTYLHHHGHND-LPWYRGEEWSYLRGGLTTV 285
Query: 181 DRDYGWINNVHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYKEPEKSAPLPFHLL 240
DRDYGWINN+HHDIGTHVIHHLFPQIPHYHLVEAT+AA+PVLG+YY+EPEKS PLP HL
Sbjct: 286 DRDYGWINNIHHDIGTHVIHHLFPQIPHYHLVEATKAARPVLGRYYREPEKSGPLPLHLF 345
Query: 241 GVLAKSLNSDHYVSDTGDVVYYQTDLKTSSSAQSSD 276
GVL +SL DH+VSD GDVVYYQTD + + + D
Sbjct: 346 GVLLRSLRVDHFVSDVGDVVYYQTDHSLNGTDWAED 381
>Os11g0104400 Similar to W-3 fatty acid desaturase (Fragment)
Length = 269
Score = 412 bits (1060), Expect = e-115, Method: Compositional matrix adjust.
Identities = 194/269 (72%), Positives = 222/269 (82%), Gaps = 4/269 (1%)
Query: 8 NSVVGHILHSSILVPYHGWRISHRTHHQNHGHVEKDESWQPLSERLYNSLDYMTKKLRFT 67
N+VVGH+LHS ILVPYHGWRISHRTHHQNHGH+E+DESW P++E+LY L+ TKKLRFT
Sbjct: 1 NNVVGHLLHSFILVPYHGWRISHRTHHQNHGHIERDESWHPITEKLYWQLETRTKKLRFT 60
Query: 68 MPFPMLAFPLYLFARSPGKKGSHFNPSSDLFQPNEKKDVITSTASWLAMVGILAGLTFVM 127
+PF +LAFP Y RSPGK GSHF PSSDLF P EK DVI ST W M+ +L L V
Sbjct: 61 LPFTLLAFPWY---RSPGKTGSHFLPSSDLFSPKEKSDVIVSTTCWCIMISLLVALACVF 117
Query: 128 GPLKMLKLYAVPYVIFVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWI 187
GP+ +L LY VPY++FVMWLD VTYLHHHGH D LPWYRG+EWSYLRGGLTT+DRDYGWI
Sbjct: 118 GPVPVLMLYGVPYLVFVMWLDLVTYLHHHGHND-LPWYRGEEWSYLRGGLTTVDRDYGWI 176
Query: 188 NNVHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYKEPEKSAPLPFHLLGVLAKSL 247
NN+HHDIGTHVIHHLFPQIPHYHLVEAT+AA+PVLG+YY+EPEKS PLP HL GVL +SL
Sbjct: 177 NNIHHDIGTHVIHHLFPQIPHYHLVEATKAARPVLGRYYREPEKSGPLPLHLFGVLLRSL 236
Query: 248 NSDHYVSDTGDVVYYQTDLKTSSSAQSSD 276
DH+VSD GDVVYYQTD + + + D
Sbjct: 237 RVDHFVSDVGDVVYYQTDHSLNGTDWAED 265
>Os02g0716500 Similar to Delta-12 fatty acid desaturase (Fragment)
Length = 388
Score = 155 bits (392), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 92/237 (38%), Positives = 129/237 (54%), Gaps = 12/237 (5%)
Query: 1 FSSNAKLNSVVGHILHSSILVPYHGWRISHRTHHQNHGHVEKDESWQPLSERL---YNSL 57
FS + L+ +VG +LHSS+LVPY W+ SHR HH N G +E+DE + P + Y
Sbjct: 119 FSDYSVLDDIVGLVLHSSLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSAMAWYTPY 178
Query: 58 DYMTKKLRFTMPFPM--LAFPLYLFARSPGKK----GSHFNPSSDLFQPNEKKDVITSTA 111
Y R F L +PLYL G+ HF+P ++ E+ + S
Sbjct: 179 VYHNPIGRLVHIFVQLTLGWPLYLAFNVSGRPYPRFACHFDPYGPIYNDRERVQIFISDV 238
Query: 112 SWLAMVGILAGLTFVMGPLKMLKLYAVPYVIFVMWLDFVTYLHHHGHEDKLPWYRGKEWS 171
++ L L+ G ++++Y VP +I WL +TYL H LP Y EW
Sbjct: 239 GVVSAGLALFKLSSAFGFWWVVRVYGVPLLIVNAWLVLITYLQH--THPALPHYDSSEWD 296
Query: 172 YLRGGLTTLDRDYGWINNVHHDI-GTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYK 227
+LRG L T+DRDYG +N V H+I THV HHLF +PHYH +EAT+A +P+LG+YY+
Sbjct: 297 WLRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIRPILGEYYQ 353
>Os07g0417200 Similar to Delta 12 oleic acid desaturase FAD2
Length = 382
Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/241 (40%), Positives = 139/241 (57%), Gaps = 19/241 (7%)
Query: 1 FSSNAKLNSVVGHILHSSILVPYHGWRISHRTHHQNHGHVEKDESWQPLSERLYNSLDYM 60
FS L+++VG +LHS++L P+ W+ SHR HH N G +EKDE + + ++L +
Sbjct: 112 FSDYLLLDNLVGLVLHSALLTPFFSWKYSHRRHHANTGSMEKDEVYVAKKK---SALPWY 168
Query: 61 TK--------KLRFTMPFPMLAFPLYLFARSPGKK-----GSHFNPSSDLFQPNEKKDVI 107
T +L + LA+PLYL G+ H++P S LF E+ V+
Sbjct: 169 TPYVFGNPVGRLVYIALQLTLAWPLYLAFNLSGQPYPRLVTCHYDPYSPLFSDQERVQVL 228
Query: 108 TSTASWLAMVGILAGLTFVMGPLKMLKLYAVPYVIFVMWLDFVTYLHHHGHEDKLPWYRG 167
S A+ LA++ L LT G ++++Y VP +I +TYLHH LP Y
Sbjct: 229 VSDAAILAVLLALHRLTAAYGLWWVVRVYGVPVMIVGALFVLITYLHHT--HRALPHYDS 286
Query: 168 KEWSYLRGGLTTLDRDYGWINNVHHDI-GTHVIHHLFPQIPHYHLVEATEAAKPVLGKYY 226
EW +LRG L T+DRDYG +N V H++ THV+HHLFP +PHYH +EAT AA+PVLG+YY
Sbjct: 287 SEWEWLRGSLATVDRDYGVLNRVLHNVTDTHVLHHLFPSMPHYHAMEATRAARPVLGEYY 346
Query: 227 K 227
K
Sbjct: 347 K 347
>Os07g0416900 Similar to Omega-6 fatty acid desaturase, endoplasmic reticulum
isozyme 2 (EC 1.14.19.-)
Length = 390
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 137/242 (56%), Gaps = 20/242 (8%)
Query: 1 FSSNAKLNSVVGHILHSSILVPYHGWRISHRTHHQNHGHVEKDESWQPLSERLYNSLDYM 60
FS +A L+ +G +LHS +L PY W+ +H+ HH N E+DE + P R + L +
Sbjct: 119 FSGHALLDDTLGLVLHSWLLAPYFSWKYTHQRHHSNTSSQERDEVFVP---RFKSDLPWY 175
Query: 61 TKKL-RFTMPFP---------MLAFPLYLFARSPGKK----GSHFNPSSDLFQPNEKKDV 106
+ + ++ P + +P+YL + G++ SHF+PS +++ E+ +
Sbjct: 176 SPYVYKYNNPVARLLLLVVQLTVGWPMYLVFNTWGRQYPRFASHFDPSGPIYKGRERVFI 235
Query: 107 ITSTASWLAMVGILAGLTFVMGPLKMLKLYAVPYVIFVMWLDFVTYLHHHGHEDKLPWYR 166
S LA+ L L G ++++Y VP ++ WL VTYLHH +P Y
Sbjct: 236 AISDIGMLAVSLALYRLAEGYGFWWVVRVYGVPLLVVNAWLVVVTYLHHT--HRAIPHYD 293
Query: 167 GKEWSYLRGGLTTLDRDYGWINNVHHDI-GTHVIHHLFPQIPHYHLVEATEAAKPVLGKY 225
EW +LRG L T+DRDY ++N V H+I THV+HHLFP IPHYH VEAT+A +P+LG+Y
Sbjct: 294 SSEWDWLRGALATVDRDYSFLNRVFHNITDTHVVHHLFPTIPHYHAVEATKAIRPILGEY 353
Query: 226 YK 227
Y+
Sbjct: 354 YQ 355
>Os06g0357100
Length = 67
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 41/63 (65%)
Query: 81 ARSPGKKGSHFNPSSDLFQPNEKKDVITSTASWLAMVGILAGLTFVMGPLKMLKLYAVPY 140
+ G+ GSHFN SSD+ QPN+KKDV+TSTASWL M GP KMLKLY V +
Sbjct: 5 CKESGETGSHFNTSSDMLQPNDKKDVMTSTASWLEMGWDSRWSDLCDGPPKMLKLYVVSH 64
Query: 141 VIF 143
++
Sbjct: 65 MVI 67
>Os08g0440900 Similar to Omega-6 fatty acid desaturase, chloroplast precursor (EC
1.14.19.-)
Length = 184
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 5/134 (3%)
Query: 98 FQPNEKKDVITSTASWLAMVGILAGLTFVM-GPLKMLKLYAVPYVIFVMWLDFVTYLHHH 156
F+PNE V S AS LA + I L + G K + +P++++ W+ T +HH
Sbjct: 4 FRPNELPRVKISLASVLAFMAIGWPLIILKSGIAGWFKFWFMPWMVYHFWMSTFTMVHHT 63
Query: 157 GHEDKLPWYRGKEWSYLRGGLT-TLDRDY-GWINNVHHDIGTHVIHHLFPQIPHYHLVEA 214
+P+ +EW+ + L T+ DY WI + HDI HV HH+ P+IP Y+L A
Sbjct: 64 A--PHIPFKTSEEWNAAQAQLNGTVHCDYPRWIEILCHDINVHVPHHISPRIPSYNLRAA 121
Query: 215 TEAAKPVLGKYYKE 228
++ K GKY E
Sbjct: 122 YDSIKQNWGKYINE 135
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.136 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,249,045
Number of extensions: 440640
Number of successful extensions: 957
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 943
Number of HSP's successfully gapped: 9
Length of query: 276
Length of database: 17,035,801
Length adjustment: 99
Effective length of query: 177
Effective length of database: 11,866,615
Effective search space: 2100390855
Effective search space used: 2100390855
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 155 (64.3 bits)