BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0267300 Os03g0267300|AB007194
(406 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0267300 Similar to Fructose-1,6-bisphosphatase, chloro... 748 0.0
Os01g0866400 Similar to Fructose-1,6-bisphosphatase (EC 3.1... 332 4e-91
Os06g0664200 Inositol phosphatase/fructose-1,6-bisphosphata... 266 2e-71
Os05g0438600 Similar to Fructose-1,6-bisphosphatase, cytoso... 147 1e-35
Os04g0234600 Similar to Sedoheptulose-1,7-bisphosphatase, c... 94 2e-19
>Os03g0267300 Similar to Fructose-1,6-bisphosphatase, chloroplast precursor (EC
3.1.3.11) (D- fructose-1,6-bisphosphate
1-phosphohydrolase) (FBPase)
Length = 406
Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/382 (95%), Positives = 363/382 (95%)
Query: 25 CGLSFRRQPGRLAGGSSAPSVRCMXXXXXXXXXXXXXXXXXXXYEITTLTTWLLKQEQAG 84
CGLSFRRQPGRLAGGSSAPSVRCM YEITTLTTWLLKQEQAG
Sbjct: 25 CGLSFRRQPGRLAGGSSAPSVRCMAAVDTASAPAATEASKKSSYEITTLTTWLLKQEQAG 84
Query: 85 TIDGEMTIVLASISTACKQIASLVQRAPISNLTGVQGAVNVQGEDQKKLDVVSNEVFSNC 144
TIDGEMTIVLASISTACKQIASLVQRAPISNLTGVQGAVNVQGEDQKKLDVVSNEVFSNC
Sbjct: 85 TIDGEMTIVLASISTACKQIASLVQRAPISNLTGVQGAVNVQGEDQKKLDVVSNEVFSNC 144
Query: 145 LKSSGRTGVIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTGSIFGIYSPNDE 204
LKSSGRTGVIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTGSIFGIYSPNDE
Sbjct: 145 LKSSGRTGVIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTGSIFGIYSPNDE 204
Query: 205 CLADIADDQNLDQVEQRCIVSVCQPGSNLLAAGYCMYSSSVIFVLTIGTGVYVFTLDPMY 264
CLADIADDQNLDQVEQRCIVSVCQPGSNLLAAGYCMYSSSVIFVLTIGTGVYVFTLDPMY
Sbjct: 205 CLADIADDQNLDQVEQRCIVSVCQPGSNLLAAGYCMYSSSVIFVLTIGTGVYVFTLDPMY 264
Query: 265 GEFVLTQEKVQIPKAGKIYAFNEGNYALWDDKLKSYMDSLKEPGPSGKPYSARYIGSLVG 324
GEFVLTQEKVQIPKAGKIYAFNEGNYALWDDKLKSYMDSLKEPGPSGKPYSARYIGSLVG
Sbjct: 265 GEFVLTQEKVQIPKAGKIYAFNEGNYALWDDKLKSYMDSLKEPGPSGKPYSARYIGSLVG 324
Query: 325 DFHRTLLYGGIYGYPRDQKSKNGKLRLLYECAPMSFIVEQAGGKGSDGHQRILDIMPTEI 384
DFHRTLLYGGIYGYPRDQKSKNGKLRLLYECAPMSFIVEQAGGKGSDGHQRILDIMPTEI
Sbjct: 325 DFHRTLLYGGIYGYPRDQKSKNGKLRLLYECAPMSFIVEQAGGKGSDGHQRILDIMPTEI 384
Query: 385 HQRVPLYIGSVEEVEKVEKFLA 406
HQRVPLYIGSVEEVEKVEKFLA
Sbjct: 385 HQRVPLYIGSVEEVEKVEKFLA 406
>Os01g0866400 Similar to Fructose-1,6-bisphosphatase (EC 3.1.3.11) (Fragment)
Length = 339
Score = 332 bits (850), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 167/339 (49%), Positives = 226/339 (66%), Gaps = 15/339 (4%)
Query: 69 EITTLTTWLL-KQEQAGTIDGEMTIVLASISTACKQIASLVQRAPISNLTGVQGAVNVQG 127
++ T+T ++L +Q + G++TI+L+ I CK +AS V +A ++ L G+ G NVQ
Sbjct: 11 DLMTITRYVLNEQSRNPEARGDLTILLSHIVLGCKFVASAVNKAGLAKLIGLAGETNVQA 70
Query: 128 EDQKKLDVVSNEVFSNCLKSSGRTGVIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNID 187
++QKKLDV+SNEVF L SSGRT V+ SEE++ V+ + G Y V FDPLDGSSNID
Sbjct: 71 KEQKKLDVLSNEVFVKALVSSGRTCVLVSEEDEEATFVDPALRGKYCVCFDPLDGSSNID 130
Query: 188 AAVSTGSIFGIYSPNDECLADIADDQNLDQVEQRCIVSVCQPGSNLLAAGYCMYSSSVIF 247
VS G+IFGIY I D +N+ + V QPG N++AAGYCMY SS
Sbjct: 131 CGVSIGTIFGIYM--------IKDKENV------TLEDVLQPGKNMVAAGYCMYGSSCTL 176
Query: 248 VLTIGTGVYVFTLDPMYGEFVLTQEKVQIPKAGKIYAFNEGNYALWDDKLKSYMDSLKEP 307
VL+ G GV FTLDP GEF+LT ++IPK GKIY+ NEGN WD+ +++ K P
Sbjct: 177 VLSTGNGVNGFTLDPSLGEFILTHPDIKIPKKGKIYSVNEGNAKNWDEPTAKFVEKCKFP 236
Query: 308 GPSGKPYSARYIGSLVGDFHRTLLYGGIYGYPRDQKSKNGKLRLLYECAPMSFIVEQAGG 367
P S RYIGS+V D HRTLLYGG++ YP D+KS NGKLR+LYE PMSF++EQAGG
Sbjct: 237 KDGSSPKSLRYIGSMVADVHRTLLYGGVFLYPADKKSPNGKLRVLYEVFPMSFLMEQAGG 296
Query: 368 KGSDGHQRILDIMPTEIHQRVPLYIGSVEEVEKVEKFLA 406
+ G +R LD++PT+IH+R P+++GS E+VE+++ A
Sbjct: 297 QSFTGKERALDLVPTKIHERSPIFLGSFEDVEEIKGLYA 335
>Os06g0664200 Inositol phosphatase/fructose-1,6-bisphosphatase family protein
Length = 401
Score = 266 bits (680), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 146/338 (43%), Positives = 216/338 (63%), Gaps = 22/338 (6%)
Query: 72 TLTTWLLKQEQAGTIDGEMTIVLASISTACKQIASLVQ---RAPISNLTGVQGAVNVQGE 128
T T L QAG D ++ +++A + +ACK+IA+LV A +S G G
Sbjct: 68 TPPTLLEYMGQAGAAD-DLVVLVAHVQSACKRIAALVASPGNAELSRGKAGGGVAVAAGR 126
Query: 129 DQKK-LDVVSNEVFSNCLKSSGRTGVIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNID 187
D K LD +SNE+ + L+ SG+ V+ASEE +P+ V S Y+VV DPLDGS NI+
Sbjct: 127 DAPKPLDELSNEIILSSLRRSGKVAVMASEENHLPIWV--SNDSPYVVVTDPLDGSRNIE 184
Query: 188 AAVSTGSIFGIYSPNDECLADIADDQNLDQVEQRCIVSVCQPGSNLLAAGYCMYSSSVIF 247
++ TG+IFGIY+ +A+ +L + E+R ++ Q G++L+A+GY +YSS+ IF
Sbjct: 185 VSIPTGTIFGIYN-------RLAELDHLPE-EERAQLNSLQSGTHLVASGYVLYSSATIF 236
Query: 248 VLTIGTGVYVFTLDPMYGEFVLTQEKVQIPKAGKIYAFNEGNYALWDDKLKSYMDSLKE- 306
++ G G + FTLD + GEFVLT +QIP G+IY+ N+ Y W + L+ Y+D++++
Sbjct: 237 CISFGAGTHGFTLDHLTGEFVLTHPSIQIPPRGQIYSVNDARYFDWPEGLRKYIDTIRQG 296
Query: 307 PGPSGKPYSARYIGSLVGDFHRTLLYGGIYGYPRDQKSKNGKLRLLYECAPMSFIVEQAG 366
G K YSARY+ SLV DFHRTL+YGG+ PRD LRL+YE P+SF+ EQAG
Sbjct: 297 KGQHPKKYSARYVCSLVADFHRTLIYGGVAMNPRDH------LRLVYEANPLSFLAEQAG 350
Query: 367 GKGSDGHQRILDIMPTEIHQRVPLYIGSVEEVEKVEKF 404
G+GSDG RIL I P ++HQR+PL++G +E++ ++E +
Sbjct: 351 GRGSDGKSRILSIQPVKLHQRLPLFLGGMEDMLELESY 388
>Os05g0438600 Similar to Fructose-1,6-bisphosphatase, cytosolic (EC 3.1.3.11)
(D-fructose-1,6- bisphosphate 1-phosphohydrolase)
(FBPase) (CY-F1)
Length = 141
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/155 (50%), Positives = 94/155 (60%), Gaps = 14/155 (9%)
Query: 195 IFGIYSPNDECLADIADDQNLDQVEQRCIVSVCQPGSNLLAAGYCMYSSSVIFVLTIGTG 254
IFGIY D+ D+ LD V QPG+++LAAGYCMY SS VL+ G G
Sbjct: 1 IFGIYMIKDK------DNVTLDDV--------LQPGTDMLAAGYCMYGSSCTLVLSTGNG 46
Query: 255 VYVFTLDPMYGEFVLTQEKVQIPKAGKIYAFNEGNYALWDDKLKSYMDSLKEPGPSGKPY 314
V FTLDP GEF+LT ++IP GKIY+ NEGN WD +++ K P
Sbjct: 47 VNGFTLDPSLGEFILTHPNIKIPNRGKIYSVNEGNAKNWDAPTAKFVEKCKFPQDGSPSK 106
Query: 315 SARYIGSLVGDFHRTLLYGGIYGYPRDQKSKNGKL 349
S RYIGS+V D HRTLLYGGI+ YP DQKS NGKL
Sbjct: 107 SLRYIGSMVADVHRTLLYGGIFLYPADQKSPNGKL 141
>Os04g0234600 Similar to Sedoheptulose-1,7-bisphosphatase, chloroplast precursor
(EC 3.1.3.37) (Sedoheptulose-bisphosphatase) (SBPASE)
(SED(1,7)P2ASE)
Length = 392
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 154/331 (46%), Gaps = 50/331 (15%)
Query: 85 TIDGEMTIVLASISTACKQIASLVQRAPISNLTGVQGAVNVQGEDQKKLDVVSNEVFSNC 144
T D + +L + A + I+ V+ A G VN G++Q +D++++++
Sbjct: 86 TPDKNLIRLLICMGEAMRTISFKVRTASC----GGTACVNSFGDEQLAVDMLADKLLFEA 141
Query: 145 LKSSGRTGVIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTGSIFGIYSPNDE 204
L+ S SEE + G + V FDPLDGSS +D + G+IFG++ P D+
Sbjct: 142 LEYSHVCKYACSEEVPELQDMGGPVDGGFSVAFDPLDGSSIVDTNFTVGTIFGVW-PGDK 200
Query: 205 CLADIADDQNLDQVEQRCIVSVCQPGSNLLAAGYCMYSSSVIFVLTI----GTGVYVFTL 260
DQ +AA +Y +++ + GT ++ L
Sbjct: 201 LTGVTGGDQ--------------------VAAAMGIYGPRTTYIIALKDCPGTHEFLL-L 239
Query: 261 DPMYGEFVLTQEKVQIPKAGKIYAFNEGNY-ALWD----DKLKSYMDSLKEPGPSGKPYS 315
D G++ Q+ I G+ F+ GN A +D DKL +Y +KE Y+
Sbjct: 240 DE--GKWQHVQDTTTI---GEGKMFSPGNLRATFDNPEYDKLINYY--VKEK------YT 286
Query: 316 ARYIGSLVGDFHRTLLY-GGIYGYPRDQKSKNGKLRLLYECAPMSFIVEQAGGKGSDGHQ 374
RY G +V D ++ ++ GI+ +K KLRLL+E AP+ F++E+AGG SDG Q
Sbjct: 287 LRYTGGMVPDVNQIIVKEKGIFTNVTSPTAK-AKLRLLFEVAPLGFLIEKAGGYSSDGKQ 345
Query: 375 RILDIMPTEIHQRVPLYIGSVEEVEKVEKFL 405
+LD + + +R + GS E+ + E+ L
Sbjct: 346 SVLDKVINNLDERTQVAYGSKNEIIRFEETL 376
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.135 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,813,354
Number of extensions: 539278
Number of successful extensions: 1216
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 1209
Number of HSP's successfully gapped: 5
Length of query: 406
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 303
Effective length of database: 11,657,759
Effective search space: 3532300977
Effective search space used: 3532300977
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 157 (65.1 bits)