Os05g0438600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Fructose-1,6-bisphosphatase, cytosolic (EC 3.1.3.11) (D-fructose-1,6- bisphosphate 1-phosphohydrolase) (FBPase) (CY-F1).
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Os05g0438600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Fructose-1,6-bisphosphatase, cytosolic (EC 3.1.3.11) (D-fructose-1,6- bisphosphate 1-phosphohydrolase) (FBPase) (CY-F1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 84.78 | 0.433 | 9.74 | -2.86 | 1.08 | -1.58 | -0.242 | 0.965 | 0.187 | 0.6 | 25.75 | 1661 | -- | -- |
| 85.56 | 0.431 | 9.71 | -2.69 | 1.08 | -1.69 | -0.245 | -- | 0.239 | 0.562 | 24.72 | 1655 | -- | -- |
| 85.03 | 0.429 | 9.74 | -2.86 | 1.08 | -1.58 | -- | 0.97 | 0.187 | 0.631 | 25.8 | 1672 | -- | -- |
| 85.82 | 0.431 | 9.71 | -2.68 | 1.08 | -1.69 | -- | -- | 0.24 | 0.582 | 24.78 | 1656 | -- | -- |
| 128.34 | 0.528 | 9.73 | -2.94 | -- | -2 | -- | 1.2 | 0.129 | -- | 29.3 | 949 | -- | -- |
| 124.04 | 0.522 | 9.63 | -2.16 | 1.09 | -- | -0.206 | -- | 0.594 | 0.581 | -- | -- | -- | -- |
| 124.22 | 0.522 | 9.63 | -2.15 | 1.09 | -- | -- | -- | 0.595 | 0.593 | -- | -- | -- | -- |
| 130.41 | 0.532 | 9.71 | -2.7 | -- | -2.03 | -- | -- | 0.178 | -- | 28.8 | 953 | -- | -- |
| 238.91 | 0.724 | 9.6 | -- | 1.16 | -0.696 | -- | -- | 0.75 | 0.519 | 23.47 | 40 | -- | -- |
| 198.11 | 0.658 | 9.61 | -2.11 | -- | -- | -- | -- | 0.614 | -- | -- | -- | -- | -- |
| 245.9 | 0.734 | 9.58 | -- | 1.05 | -- | -- | -- | 0.834 | 0.494 | -- | -- | -- | -- |
| 300.12 | 0.807 | 9.59 | -- | -- | -0.916 | -- | -- | 0.688 | -- | 29.3 | 909 | -- | -- |
| 315.6 | 0.829 | 9.56 | -- | -- | -- | -- | -- | 0.848 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 78.41 | temperature | 30 | 720 | < th | dose dependent | sin | 17 | NA |
| 3 | 79.06 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 7 |
| 8 | 79.39 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 9 |
| 9 | 79.46 | temperature | 25 | 270 | < th | dose dependent | rect. | 11 | 18 |
| 12 | 79.52 | temperature | 30 | 720 | < th | dose dependent | rect. | 10 | 14 |
| 17 | 79.80 | temperature | 30 | 720 | < th | dose dependent | rect. | 11 | 12 |
| 26 | 79.96 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 83 | 80.99 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 20 |
| 89 | 81.04 | temperature | 25 | 270 | < th | dose dependent | sin | 14 | NA |
| 101 | 81.23 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 14 |
| 190 | 82.25 | temperature | 10 | 720 | > th | dose dependent | sin | 16 | NA |
| 214 | 82.57 | temperature | 25 | 90 | < th | dose dependent | rect. | 12 | 23 |
| 303 | 83.25 | temperature | 15 | 270 | > th | dose dependent | sin | 12 | NA |
| 366 | 83.97 | temperature | 25 | 720 | < th | dose independent | rect. | 10 | 13 |
| 416 | 84.42 | temperature | 25 | 720 | > th | dose independent | rect. | 15 | 4 |
| 451 | 84.63 | temperature | 15 | 720 | > th | dose dependent | rect. | 7 | 18 |
| 462 | 84.72 | temperature | 25 | 720 | < th | dose independent | rect. | 14 | 8 |
| 476 | 84.79 | temperature | 25 | 720 | > th | dose independent | sin | 19 | NA |
| 494 | 84.91 | temperature | 25 | 720 | > th | dose independent | rect. | 7 | 17 |
| 535 | 85.11 | temperature | 10 | 1440 | > th | dose dependent | rect. | 19 | 4 |
| 551 | 85.18 | temperature | 25 | 720 | < th | dose independent | sin | 19 | NA |
| 762 | 85.93 | temperature | 25 | 720 | > th | dose independent | rect. | 13 | 10 |
| 763 | 85.93 | temperature | 20 | 720 | > th | dose dependent | rect. | 16 | 3 |
| 893 | 86.22 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |