Os01g0866400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Fructose-1,6-bisphosphatase (EC 3.1.3.11) (Fragment).
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Os01g0866400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Fructose-1,6-bisphosphatase (EC 3.1.3.11) (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 54.89 | 0.348 | 14.6 | -0.498 | 1.74 | -2.26 | 1.65 | 0.624 | -0.243 | 6.01 | 8.878 | 261 | 2.17 | 13.2 |
| 55.12 | 0.346 | 14.7 | -0.552 | 1.81 | -2.34 | 1.8 | -- | -0.256 | 6.31 | 5.978 | 271 | 2.2 | 13 |
| 60.52 | 0.362 | 14.6 | -0.484 | 1.76 | -2.22 | -- | 0.716 | -0.244 | 5.91 | 7.227 | 320 | 1.68 | 13.2 |
| 61.34 | 0.365 | 14.7 | -0.506 | 1.75 | -2.21 | -- | -- | -0.261 | 5.85 | 7.432 | 319 | 1.7 | 13.4 |
| 76.1 | 0.406 | 14.7 | -0.352 | -- | -2.8 | -- | 1.17 | -0.236 | -- | 6.747 | 544 | 4.35 | 10.8 |
| 91.48 | 0.448 | 14.7 | -0.741 | 2.28 | -- | 0.642 | -- | -0.448 | 2.82 | -- | -- | -- | -- |
| 92.88 | 0.451 | 14.7 | -0.756 | 2.28 | -- | -- | -- | -0.452 | 2.79 | -- | -- | -- | -- |
| 70.65 | 0.391 | 14.7 | -0.459 | -- | -2.78 | -- | -- | -0.266 | -- | 7.016 | 508 | 4.54 | 10.6 |
| 67.16 | 0.382 | 14.6 | -- | 1.73 | -2.57 | -- | -- | -0.163 | 6.34 | 8.622 | 334 | 1.38 | 13.6 |
| 394.16 | 0.928 | 14.7 | -0.659 | -- | -- | -- | -- | -0.394 | -- | -- | -- | -- | -- |
| 107.96 | 0.486 | 14.7 | -- | 2.26 | -- | -- | -- | -0.368 | 2.79 | -- | -- | -- | -- |
| 75.5 | 0.405 | 14.7 | -- | -- | -2.78 | -- | -- | -0.246 | -- | 7.267 | 451 | 5.5 | 10.1 |
| 405.62 | 0.94 | 14.7 | -- | -- | -- | -- | -- | -0.32 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 55.66 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 13 |
| 19 | 62.24 | radiation | 40.0 | 270 | < th | dose independent | rect. | 7 | 14 |
| 26 | 63.27 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 5 | 7 |
| 28 | 63.38 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 7 | 14 |
| 46 | 64.54 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 7 | 2 |
| 53 | 64.77 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 10 | 6 |
| 55 | 64.84 | radiation | 40.0 | 270 | < th | dose independent | sin | 17 | NA |
| 56 | 64.84 | radiation | 40.0 | 270 | < th | dose independent | rect. | 16 | 20 |
| 59 | 64.93 | radiation | 40.0 | 270 | < th | dose independent | rect. | 17 | 18 |
| 68 | 65.43 | radiation | 40.0 | 90 | < th | dose dependent | sin | 15 | NA |
| 72 | 65.53 | temperature | 25.0 | 270 | > th | dose independent | rect. | 11 | 5 |
| 91 | 65.97 | radiation | 40.0 | 270 | < th | dose dependent | sin | 20 | NA |
| 97 | 66.01 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 3 | 15 |
| 108 | 66.24 | temperature | 10.0 | 270 | > th | dose dependent | sin | 2 | NA |
| 119 | 66.39 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 3 | 4 |
| 121 | 66.40 | temperature | 30.0 | 270 | < th | dose dependent | sin | 2 | NA |
| 129 | 66.56 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 1 | 17 |
| 142 | 66.72 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 16 | 9 |
| 177 | 67.20 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 12 | 6 |
| 178 | 67.22 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 11 | 5 |
| 182 | 67.30 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 6 | 13 |
| 194 | 67.51 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 12 | 3 |
| 198 | 67.52 | radiation | 10.0 | 270 | > th | dose independent | rect. | 12 | 3 |
| 203 | 67.56 | temperature | 15.0 | 30 | > th | dose independent | rect. | 18 | 18 |
| 214 | 67.75 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 11 | 5 |
| 222 | 67.83 | temperature | 25.0 | 30 | > th | dose independent | rect. | 12 | 6 |
| 236 | 68.01 | temperature | 30.0 | 30 | < th | dose independent | rect. | 18 | 18 |
| 237 | 68.02 | wind | 9.0 | 30 | < th | dose independent | rect. | 12 | 6 |
| 247 | 68.15 | wind | 7.0 | 270 | < th | dose independent | rect. | 11 | 5 |
| 260 | 68.22 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 18 | 18 |
| 263 | 68.26 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 12 | 6 |
| 274 | 68.38 | wind | 7.0 | 270 | < th | dose independent | rect. | 12 | 3 |
| 277 | 68.42 | temperature | 10.0 | 30 | > th | dose independent | rect. | 12 | 6 |
| 282 | 68.42 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 18 | 18 |
| 286 | 68.45 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 12 | 6 |
| 287 | 68.45 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 12 | 6 |
| 289 | 68.46 | temperature | 30.0 | 90 | < th | dose independent | rect. | 7 | 5 |
| 290 | 68.47 | radiation | 40.0 | 270 | < th | dose independent | rect. | 5 | 7 |
| 296 | 68.53 | humidity | 90.0 | 270 | < th | dose independent | rect. | 11 | 5 |
| 313 | 68.61 | wind | 9.0 | 30 | < th | dose independent | rect. | 18 | 18 |
| 314 | 68.62 | humidity | 90.0 | 270 | < th | dose independent | rect. | 12 | 3 |
| 315 | 68.62 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 11 | 20 |
| 322 | 68.71 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 14 |
| 332 | 68.76 | wind | 7.0 | 270 | < th | dose independent | rect. | 1 | 14 |
| 351 | 68.91 | wind | 7.0 | 270 | < th | dose independent | rect. | 22 | 18 |
| 356 | 68.94 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 8 | 5 |
| 358 | 68.95 | radiation | 40.0 | 270 | > th | dose independent | rect. | 12 | 22 |
| 361 | 68.97 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 21 | 10 |
| 371 | 69.00 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 18 | 18 |
| 385 | 69.00 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 18 | 18 |
| 389 | 69.02 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 13 | 6 |
| 393 | 69.02 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 19 | 18 |
| 396 | 69.02 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 19 | 18 |
| 407 | 69.05 | radiation | 20.0 | 270 | < th | dose independent | rect. | 21 | 10 |
| 408 | 69.07 | temperature | 15.0 | 270 | > th | dose independent | rect. | 1 | 14 |
| 409 | 69.08 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 12 | 3 |
| 418 | 69.15 | humidity | 70.0 | 270 | > th | dose independent | rect. | 21 | 10 |
| 423 | 69.19 | radiation | 1.0 | 270 | > th | dose independent | rect. | 11 | 6 |
| 431 | 69.22 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 10 |
| 432 | 69.22 | temperature | 30.0 | 270 | < th | dose independent | rect. | 21 | 10 |
| 433 | 69.22 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 10 |
| 435 | 69.22 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 10 |
| 437 | 69.22 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 14 |
| 440 | 69.24 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 3 |
| 441 | 69.24 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 3 |
| 443 | 69.26 | wind | 9.0 | 270 | < th | dose independent | rect. | 21 | 10 |
| 456 | 69.30 | wind | 1.0 | 30 | > th | dose independent | rect. | 12 | 6 |
| 463 | 69.33 | humidity | 90.0 | 30 | < th | dose independent | rect. | 12 | 6 |
| 473 | 69.38 | temperature | 15.0 | 270 | > th | dose independent | rect. | 17 | 18 |
| 478 | 69.43 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 24 | 3 |
| 480 | 69.44 | wind | 7.0 | 270 | < th | dose independent | rect. | 23 | 16 |
| 483 | 69.46 | temperature | 10.0 | 270 | > th | dose independent | rect. | 12 | 3 |
| 487 | 69.46 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 21 |
| 495 | 69.49 | radiation | 40.0 | 90 | < th | dose independent | rect. | 7 | 6 |
| 505 | 69.55 | wind | 1.0 | 270 | > th | dose independent | rect. | 15 | 10 |
| 509 | 69.58 | temperature | 15.0 | 270 | > th | dose independent | rect. | 15 | 10 |
| 526 | 69.66 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 12 | 3 |
| 527 | 69.66 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 544 | 69.69 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 11 | 5 |
| 546 | 69.69 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 14 |
| 549 | 69.69 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 11 | 5 |
| 551 | 69.69 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 14 |
| 561 | 69.74 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 10 |
| 562 | 69.74 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 21 |
| 565 | 69.74 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 21 | 10 |
| 566 | 69.74 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 10 |
| 568 | 69.74 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 21 |
| 575 | 69.76 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 24 | 11 |
| 594 | 69.85 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 18 |
| 595 | 69.85 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 16 | 19 |
| 599 | 69.85 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 16 | 19 |
| 600 | 69.86 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 12 | 6 |
| 620 | 69.93 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 18 |
| 623 | 69.94 | temperature | 25.0 | 270 | < th | dose independent | rect. | 6 | 7 |
| 630 | 69.97 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 24 | 5 |
| 680 | 70.11 | radiation | 40.0 | 270 | < th | dose independent | rect. | 7 | 3 |
| 692 | 70.15 | radiation | 30.0 | 270 | < th | dose independent | rect. | 15 | 10 |
| 714 | 70.24 | temperature | 15.0 | 270 | > th | dose independent | rect. | 16 | 6 |
| 721 | 70.26 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 21 |
| 760 | 70.35 | radiation | 40.0 | 270 | > th | dose independent | sin | 17 | NA |
| 762 | 70.35 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 16 | 6 |
| 770 | 70.38 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 14 |
| 837 | 70.58 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 8 | 5 |
| 852 | 70.65 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 11 | 5 |
| 856 | 70.66 | radiation | 1.0 | 30 | > th | dose independent | rect. | 12 | 7 |
| 872 | 70.67 | radiation | 1.0 | 30 | > th | dose independent | rect. | 7 | 5 |
| 883 | 70.69 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 14 |
| 897 | 70.76 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 17 | 18 |
| 918 | 70.83 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 14 |
| 928 | 70.84 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 8 | 5 |
| 930 | 70.84 | wind | 9.0 | 30 | < th | dose independent | rect. | 12 | 19 |
| 931 | 70.84 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 13 | 19 |
| 938 | 70.85 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 12 | 8 |
| 985 | 70.92 | temperature | 25.0 | 270 | > th | dose independent | rect. | 2 | 14 |
| 991 | 70.93 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 14 |
| 992 | 70.93 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 14 |