Os03g0267300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Fructose-1,6-bisphosphatase, chloroplast precursor (EC 3.1.3.11) (D- fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase).
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Os03g0267300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Fructose-1,6-bisphosphatase, chloroplast precursor (EC 3.1.3.11) (D- fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.14 | 0.29 | 13.3 | -1.63 | 0.755 | 0.721 | 1.45 | -0.798 | -0.586 | 6.32 | 24.67 | 916 | -- | -- |
| 38.4 | 0.289 | 13.3 | -1.48 | 0.732 | 0.641 | 1.47 | -- | -0.553 | 6.38 | 24.56 | 921 | -- | -- |
| 42.92 | 0.305 | 13.3 | -1.7 | 0.692 | 0.721 | -- | -1.24 | -0.626 | 6.11 | 24.7 | 1017 | -- | -- |
| 43.23 | 0.306 | 13.3 | -1.44 | 0.654 | 0.496 | -- | -- | -0.547 | 5.68 | 25.39 | 1236 | -- | -- |
| 65.72 | 0.378 | 13.3 | -1.69 | -- | 0.591 | -- | -0.807 | -0.614 | -- | 24 | 2713 | -- | -- |
| 48.59 | 0.327 | 13.3 | -1.29 | 0.656 | -- | 1.31 | -- | -0.481 | 5.59 | -- | -- | -- | -- |
| 52.6 | 0.34 | 13.3 | -1.29 | 0.665 | -- | -- | -- | -0.487 | 5.23 | -- | -- | -- | -- |
| 62.97 | 0.37 | 13.3 | -1.47 | -- | 0.571 | -- | -- | -0.553 | -- | 24.81 | 1286 | -- | -- |
| 93.51 | 0.45 | 13.2 | -- | 0.611 | 0.333 | -- | -- | -0.291 | 5.3 | 34.81 | 1259 | -- | -- |
| 75.74 | 0.407 | 13.3 | -1.26 | -- | -- | -- | -- | -0.47 | -- | -- | -- | -- | -- |
| 96.24 | 0.459 | 13.2 | -- | 0.643 | -- | -- | -- | -0.344 | 5.3 | -- | -- | -- | -- |
| 110.33 | 0.489 | 13.2 | -- | -- | -0.661 | -- | -- | -0.254 | -- | 15.17 | 270 | -- | -- |
| 117.86 | 0.507 | 13.2 | -- | -- | -- | -- | -- | -0.33 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 37.23 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 13 | 19 |
| 5 | 37.40 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 5 |
| 7 | 37.43 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 13 | 16 |
| 28 | 37.67 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 36 | 37.71 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 37 | 37.71 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 2 |
| 55 | 37.83 | temperature | 25.0 | 720 | > th | dose dependent | sin | 16 | NA |
| 65 | 37.92 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 13 | 6 |
| 72 | 37.96 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 114 | 38.21 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 115 | 38.21 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 4 |
| 119 | 38.23 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 124 | 38.26 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 3 |
| 145 | 38.37 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 146 | 38.37 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 160 | 38.43 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 176 | 38.49 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 183 | 38.52 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 221 | 38.70 | radiation | 1.0 | 1440 | > th | dose independent | sin | 0 | NA |
| 250 | 38.80 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 253 | 38.81 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 261 | 38.82 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 7 | 11 |
| 265 | 38.83 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 7 | 23 |
| 289 | 38.86 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 20 | NA |
| 291 | 38.86 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 8 |
| 330 | 38.94 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 3 |
| 337 | 38.95 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 8 |
| 361 | 38.98 | radiation | 1.0 | 1440 | < th | dose independent | sin | 0 | NA |
| 388 | 39.01 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 3 |
| 395 | 39.03 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 405 | 39.04 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 423 | 39.07 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 446 | 39.10 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 7 | 21 |
| 476 | 39.14 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 483 | 39.14 | temperature | 25.0 | 720 | > th | dose dependent | no | NA | NA |
| 502 | 39.16 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 536 | 39.18 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 5 | 13 |
| 567 | 39.19 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 7 | 23 |
| 593 | 39.22 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 624 | 39.24 | atmosphere | 1000.0 | 43200 | < th | dose independent | sin | 1 | NA |
| 659 | 39.25 | atmosphere | 1000.0 | 43200 | > th | dose independent | sin | 1 | NA |
| 725 | 39.26 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 764 | 39.28 | radiation | 1.0 | 1440 | > th | dose independent | no | NA | NA |
| 794 | 39.28 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 3 | 17 |
| 853 | 39.28 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 20 | 23 |
| 928 | 39.30 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 956 | 39.31 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 991 | 39.32 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 19 | 19 |