BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0264400 Os03g0264400|AK105648
(606 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0264400 Anthranilate synthase alpha 2 subunit 1056 0.0
Os03g0826500 Anthranilate synthase alpha 1 subunit 750 0.0
Os06g0699700 Similar to Aminodeoxychorismate synthase/gluta... 152 9e-37
>Os03g0264400 Anthranilate synthase alpha 2 subunit
Length = 606
Score = 1056 bits (2732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/606 (85%), Positives = 519/606 (85%)
Query: 1 MESIAAATFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSAGKPEASAV 60
MESIAAATF CSAGKPEASAV
Sbjct: 1 MESIAAATFTPSRLAARPATPAAAAAPVRARAAVAAGGRRRTSRRGGVRCSAGKPEASAV 60
Query: 61 INGSXXXXXXXXXXXXXXXXXXXGSGKGNLVPMWECIVSDHLTPVLAYRCLVPEDNMETP 120
INGS GSGKGNLVPMWECIVSDHLTPVLAYRCLVPEDNMETP
Sbjct: 61 INGSAAARAAEEDRRRFFEAAERGSGKGNLVPMWECIVSDHLTPVLAYRCLVPEDNMETP 120
Query: 121 SFLFESVEQGPEGTTNVGRYSMVGAHPVMEVVAKEHKVTIMDHEKGKVTEQVVDDPMQIP 180
SFLFESVEQGPEGTTNVGRYSMVGAHPVMEVVAKEHKVTIMDHEKGKVTEQVVDDPMQIP
Sbjct: 121 SFLFESVEQGPEGTTNVGRYSMVGAHPVMEVVAKEHKVTIMDHEKGKVTEQVVDDPMQIP 180
Query: 181 RSMMEGWHPQQIDQLPDSFTGGWVGFFSYDTVRYVEKKKLPFSGAPQDDRNLPDVHLGLY 240
RSMMEGWHPQQIDQLPDSFTGGWVGFFSYDTVRYVEKKKLPFSGAPQDDRNLPDVHLGLY
Sbjct: 181 RSMMEGWHPQQIDQLPDSFTGGWVGFFSYDTVRYVEKKKLPFSGAPQDDRNLPDVHLGLY 240
Query: 241 DDVLVFDNVEKKVYVIHWVNLDRHATTEDAFQDGKSRLNLLLSKVHNSNVPKLSPGFVKL 300
DDVLVFDNVEKKVYVIHWVNLDRHATTEDAFQDGKSRLNLLLSKVHNSNVPKLSPGFVKL
Sbjct: 241 DDVLVFDNVEKKVYVIHWVNLDRHATTEDAFQDGKSRLNLLLSKVHNSNVPKLSPGFVKL 300
Query: 301 HTRQFGTPLNKSTMTSDEYKNAVMQAKEHIMAGDIFQIVLSQRFERRTYANPFEVYRALR 360
HTRQFGTPLNKSTMTSDEYKNAVMQAKEHIMAGDIFQIVLSQRFERRTYANPFEVYRALR
Sbjct: 301 HTRQFGTPLNKSTMTSDEYKNAVMQAKEHIMAGDIFQIVLSQRFERRTYANPFEVYRALR 360
Query: 361 IVNPSPYMAYVQARGCVLVASSPEILTRVRKGKIINRPLAGTVRRGKTEKEDEMQEQQLL 420
IVNPSPYMAYVQARGCVLVASSPEILTRVRKGKIINRPLAGTVRRGKTEKEDEMQEQQLL
Sbjct: 361 IVNPSPYMAYVQARGCVLVASSPEILTRVRKGKIINRPLAGTVRRGKTEKEDEMQEQQLL 420
Query: 421 SDEKQCAEHIMLVDLGRNDXXXXXXXXXXXXXXLMNIERYSHVMHISSTVSGELDDHLQS 480
SDEKQCAEHIMLVDLGRND LMNIERYSHVMHISSTVSGELDDHLQS
Sbjct: 421 SDEKQCAEHIMLVDLGRNDVGKVSKPGSVKVEKLMNIERYSHVMHISSTVSGELDDHLQS 480
Query: 481 WDALRAALPVGTVSGAPKVKAMELIDELEVTRRGPYSGGLGGISFDGDMLIALALRTIVF 540
WDALRAALPVGTVSGAPKVKAMELIDELEVTRRGPYSGGLGGISFDGDMLIALALRTIVF
Sbjct: 481 WDALRAALPVGTVSGAPKVKAMELIDELEVTRRGPYSGGLGGISFDGDMLIALALRTIVF 540
Query: 541 STAPSHNTMYSYKDTERRREWVAHLQAGAGIVADSSPDDEQRECENKXXXXXXXXXXXXX 600
STAPSHNTMYSYKDTERRREWVAHLQAGAGIVADSSPDDEQRECENK
Sbjct: 541 STAPSHNTMYSYKDTERRREWVAHLQAGAGIVADSSPDDEQRECENKAAALARAIDLAES 600
Query: 601 XFVDKE 606
FVDKE
Sbjct: 601 AFVDKE 606
>Os03g0826500 Anthranilate synthase alpha 1 subunit
Length = 577
Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/523 (68%), Positives = 421/523 (80%), Gaps = 2/523 (0%)
Query: 84 GSGKG-NLVPMWECIVSDHLTPVLAYRCLVPEDNMETPSFLFESVEQGPEGTTNVGRYSM 142
G+ +G N++P+ CI SDHLTPVLAYRCLV ED+ E PSFLFESVEQG EGT NVGRYS+
Sbjct: 56 GAAEGCNILPLKRCIFSDHLTPVLAYRCLVREDDREAPSFLFESVEQGSEGT-NVGRYSV 114
Query: 143 VGAHPVMEVVAKEHKVTIMDHEKGKVTEQVVDDPMQIPRSMMEGWHPQQIDQLPDSFTGG 202
VGA P ME+VAK + VT+MDH+ EQ DPM+IPRS+ME W+PQ ++ LPD+F GG
Sbjct: 115 VGAQPAMEIVAKANHVTVMDHKMKSRREQFAPDPMKIPRSIMEQWNPQIVEGLPDAFCGG 174
Query: 203 WVGFFSYDTVRYVEKKKLPFSGAPQDDRNLPDVHLGLYDDVLVFDNVEKKVYVIHWVNLD 262
WVGFFSYDTVRYVE KKLPFS AP+DDRNLPD+HLGLY+D++VFD+VEKK +VIHWV +D
Sbjct: 175 WVGFFSYDTVRYVETKKLPFSNAPEDDRNLPDIHLGLYNDIVVFDHVEKKTHVIHWVRVD 234
Query: 263 RHATTEDAFQDGKSRLNLLLSKVHNSNVPKLSPGFVKLHTRQFGTPLNKSTMTSDEYKNA 322
H + ++A++DGK++L LLS++H+ NVP L+ G VKL+ QFG+ L KS+M+ ++YK A
Sbjct: 235 CHESVDEAYEDGKNQLEALLSRLHSVNVPTLTAGSVKLNVGQFGSALQKSSMSREDYKKA 294
Query: 323 VMQAKEHIMAGDIFQIVLSQRFERRTYANPFEVYRALRIVNPSPYMAYVQARGCVLVASS 382
V+QAKEHI+AGDIFQ+VLSQRFERRT+A+PFEVYRALRIVNPSPYMAY+QARGC+LVASS
Sbjct: 295 VVQAKEHILAGDIFQVVLSQRFERRTFADPFEVYRALRIVNPSPYMAYLQARGCILVASS 354
Query: 383 PEILTRVRKGKIINRPLAGTVRRGKTEKEDEMQEQQLLSDEKQCAEHIMLVDLGRNDXXX 442
PEILTRV K I+NRPLAGT+RRGK++ ED++ EQ LLSD KQCAEHIMLVDLGRND
Sbjct: 355 PEILTRVEKRTIVNRPLAGTIRRGKSKAEDKVLEQLLLSDGKQCAEHIMLVDLGRNDVGK 414
Query: 443 XXXXXXXXXXXLMNIERYSHVMHISSTVSGELDDHLQSWDALRAALPVGTVSGAPKVKAM 502
LMN+ERYSHVMHISSTV+GEL D L WDALRAALPVGTVSGAPKV+AM
Sbjct: 415 VSKPGSVKVEKLMNVERYSHVMHISSTVTGELRDDLTCWDALRAALPVGTVSGAPKVRAM 474
Query: 503 ELIDELEVTRRGPYSGGLGGISFDGDMLIALALRTIVFSTAPSHNTMYSYKDTERRREWV 562
ELID++E RGPYSGG GG+SF GDM IALALRTIVF T +TMYSY D R+EWV
Sbjct: 475 ELIDQMEGKMRGPYSGGFGGVSFRGDMDIALALRTIVFPTGSRFDTMYSYTDKNARQEWV 534
Query: 563 AHLQAGAGIVADSSPDDEQRECENKXXXXXXXXXXXXXXFVDK 605
AHLQAGAGIVADS PDDE +EC NK FVD+
Sbjct: 535 AHLQAGAGIVADSKPDDEHQECLNKAAGLARAIDLAESTFVDE 577
>Os06g0699700 Similar to Aminodeoxychorismate synthase/glutamine amidotransferase
Length = 332
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 93/273 (34%), Positives = 145/273 (53%), Gaps = 22/273 (8%)
Query: 315 TSDEYKNAVMQAKEHIMAGDIFQIVLSQRFERRT-YANPFEVYRALRIVNPSPYMAYVQ- 372
+ DEY V ++I G+ +++ L+ + +RRT Y + ++Y LR NP+PY A++
Sbjct: 45 SKDEYIRDVQSCLDYIRDGESYELCLTTQMKRRTDYMDALKLYLKLRKQNPAPYAAWLNF 104
Query: 373 -ARGCVLVASSPEILTRVRKGKIIN-RPLAGTVRRGKTEKEDEMQEQQLLSDEKQCAEHI 430
+ + SSPE R+ + I+ +P+ GT+ RG+T +EDE QL EK AE++
Sbjct: 105 SSENLSICCSSPERFLRLDRNAILEAKPIKGTIARGRTPEEDECLRLQLKYSEKDQAENL 164
Query: 431 MLVDLGRNDXXXXXXXXXXXXXXLMNIERYSHVMHISSTVSGELDDHLQSWDALRAALPV 490
M+VDL RND LM++E Y V + ST+ G L D ++AA P
Sbjct: 165 MIVDLLRNDLGKVCEPGSVHVPRLMDVESYKTVHTMVSTIRGTKMSDLSPVDCVKAAFPG 224
Query: 491 GTVSGAPKVKAMELIDELEVTRRGPYSGGLGGISFDGDMLIALALRTIVFSTAPSHNTMY 550
G+++GAPKV++ME++D LE + RG YSG +G S++ + + +RT+V HN
Sbjct: 225 GSMTGAPKVRSMEILDSLETSPRGIYSGSVGFFSYNKTFDLNIVIRTVVL-----HN--- 276
Query: 551 SYKDTERRREWVAHLQAGAGIVADSSPDDEQRE 583
A + AG IVA S P+ E E
Sbjct: 277 ----------GEASIGAGGAIVALSDPEAEYNE 299
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.133 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 18,330,005
Number of extensions: 772095
Number of successful extensions: 1478
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 1475
Number of HSP's successfully gapped: 3
Length of query: 606
Length of database: 17,035,801
Length adjustment: 107
Effective length of query: 499
Effective length of database: 11,448,903
Effective search space: 5713002597
Effective search space used: 5713002597
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 159 (65.9 bits)