Os03g0264400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Anthranilate synthase alpha 2 subunit.
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Os03g0264400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Anthranilate synthase alpha 2 subunit.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 74.76 | 0.406 | 11.6 | 1.27 | 1.36 | 0.708 | 0.038 | 1.99 | 0.21 | 18.6 | 1.12 | 4357 | -- | -- |
| 79.54 | 0.415 | 11.7 | 1.15 | 1.23 | 0.426 | 0.0344 | -- | 0.146 | 18.4 | 2.324 | 11307 | -- | -- |
| 74.65 | 0.402 | 11.6 | 1.27 | 1.34 | 0.719 | -- | 2.05 | 0.212 | 18.7 | 1.13 | 4383 | -- | -- |
| 78.81 | 0.413 | 11.7 | 1.1 | 1.27 | 0.51 | -- | -- | 0.161 | 18.3 | 2.292 | 8450 | -- | -- |
| 93.16 | 0.45 | 11.6 | 1.16 | -- | 1.49 | -- | 0.889 | 0.216 | -- | 0.1413 | 770 | -- | -- |
| 85.08 | 0.432 | 11.7 | 0.969 | 1.34 | -- | -0.0212 | -- | 0.252 | 18.5 | -- | -- | -- | -- |
| 85.08 | 0.432 | 11.7 | 0.97 | 1.34 | -- | -- | -- | 0.251 | 18.5 | -- | -- | -- | -- |
| 90.29 | 0.443 | 11.6 | 0.878 | -- | 1.69 | -- | -- | 0.242 | -- | 0.2 | 797 | -- | -- |
| 77.15 | 0.409 | 11.8 | -- | 1.21 | 0.97 | -- | -- | -0.174 | 18.5 | 0.87 | 46837 | -- | -- |
| 178.59 | 0.624 | 11.6 | 0.937 | -- | -- | -- | -- | 0.224 | -- | -- | -- | -- | -- |
| 109.87 | 0.49 | 11.7 | -- | 1.33 | -- | -- | -- | 0.143 | 18.6 | -- | -- | -- | -- |
| 106.86 | 0.481 | 11.6 | -- | -- | 1.94 | -- | -- | 0.17 | -- | 0.00586 | 811 | -- | -- |
| 201.74 | 0.663 | 11.7 | -- | -- | -- | -- | -- | 0.12 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 72.91 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 2 | 73.01 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 5 | 73.24 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 17 | 6 |
| 6 | 73.25 | radiation | 1.0 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 69 | 73.74 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 14 | 18 |
| 73 | 73.77 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 18 | 13 |
| 75 | 73.79 | radiation | 10.0 | 4320 | > th | dose independent | rect. | 16 | 15 |
| 86 | 73.84 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 4 | 3 |
| 107 | 73.87 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 4 | 3 |
| 108 | 73.87 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 19 | 12 |
| 123 | 73.97 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 124 | 73.97 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 126 | 73.98 | radiation | 1.0 | 4320 | > th | dose independent | sin | 10 | NA |
| 130 | 73.99 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 14 | 9 |
| 143 | 74.01 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 14 | 7 |
| 145 | 74.01 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 18 | 15 |
| 169 | 74.03 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 14 | 4 |
| 191 | 74.05 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 19 | 14 |
| 209 | 74.09 | radiation | 1.0 | 4320 | < th | dose independent | sin | 10 | NA |
| 233 | 74.12 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 21 | 18 |
| 238 | 74.14 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 4 | 2 |
| 247 | 74.18 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 16 | 2 |
| 253 | 74.20 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 22 | 8 |
| 304 | 74.27 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 16 | 7 |
| 310 | 74.27 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 316 | 74.28 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 16 | 4 |
| 321 | 74.28 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 23 |
| 334 | 74.29 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 13 |
| 357 | 74.30 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 4 | 13 |
| 362 | 74.30 | radiation | 10.0 | 4320 | > th | dose independent | rect. | 15 | 17 |
| 363 | 74.30 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 22 | 19 |
| 367 | 74.30 | radiation | 1.0 | 4320 | < th | dose dependent | sin | 9 | NA |
| 379 | 74.32 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 1 | 7 |
| 380 | 74.32 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 386 | 74.32 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 1 | 7 |
| 410 | 74.34 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 18 | 5 |
| 412 | 74.34 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 1 | 7 |
| 414 | 74.35 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 415 | 74.35 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 416 | 74.35 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 6 | 3 |
| 450 | 74.36 | radiation | 10.0 | 4320 | < th | dose dependent | sin | 14 | NA |
| 471 | 74.39 | radiation | 10.0 | 4320 | < th | dose independent | sin | 13 | NA |
| 516 | 74.41 | radiation | 1.0 | 14400 | > th | dose independent | sin | 4 | NA |
| 532 | 74.42 | radiation | 1.0 | 14400 | < th | dose independent | sin | 5 | NA |
| 548 | 74.42 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 18 | 8 |
| 617 | 74.46 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 714 | 74.49 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 11 | 21 |
| 727 | 74.50 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 14 | 22 |
| 737 | 74.51 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 813 | 74.53 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 824 | 74.53 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 6 | 23 |
| 840 | 74.54 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 6 | 7 |
| 870 | 74.55 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 24 | 8 |
| 917 | 74.58 | radiation | 1.0 | 14400 | > th | dose independent | no | NA | NA |