Os03g0826500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Anthranilate synthase alpha 1 subunit.
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Os03g0826500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Anthranilate synthase alpha 1 subunit.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 148.14 | 0.572 | 9.35 | -0.229 | 1.91 | -1.12 | -0.111 | 0.249 | -0.497 | 22.7 | 20.9 | 225 | 20.5 | 15.3 |
| 148.21 | 0.567 | 9.35 | -0.284 | 1.87 | -1.13 | -0.254 | -- | -0.498 | 22.7 | 21 | 227 | 20.7 | 15.2 |
| 148.16 | 0.567 | 9.35 | -0.216 | 1.9 | -1.12 | -- | 0.295 | -0.496 | 22.7 | 21 | 225 | 20.6 | 15.3 |
| 148.38 | 0.567 | 9.35 | -0.27 | 1.87 | -1.13 | -- | -- | -0.508 | 22.7 | 20.98 | 224 | 20.7 | 15.2 |
| 190.34 | 0.643 | 9.26 | -0.33 | -- | -2.21 | -- | 0.9 | -0.452 | -- | 18.9 | 368 | 0.583 | 11.4 |
| 203.99 | 0.67 | 9.41 | -0.493 | 2.58 | -- | 0.0946 | -- | -0.653 | 21.4 | -- | -- | -- | -- |
| 204.02 | 0.669 | 9.41 | -0.497 | 2.58 | -- | -- | -- | -0.653 | 21.4 | -- | -- | -- | -- |
| 184.3 | 0.632 | 9.32 | -0.249 | -- | -2.28 | -- | -- | -0.559 | -- | 18.77 | 351 | 0.817 | 11.1 |
| 150.13 | 0.571 | 9.34 | -- | 1.81 | -1.16 | -- | -- | -0.475 | 22.7 | 21.09 | 215 | 20.9 | 15 |
| 595.34 | 1.14 | 9.34 | -0.481 | -- | -- | -- | -- | -0.662 | -- | -- | -- | -- | -- |
| 210.53 | 0.679 | 9.4 | -- | 2.58 | -- | -- | -- | -0.598 | 21.4 | -- | -- | -- | -- |
| 181.94 | 0.628 | 9.32 | -- | -- | -2.22 | -- | -- | -0.555 | -- | 19.5 | 303 | 1.58 | 10.4 |
| 601.45 | 1.14 | 9.33 | -- | -- | -- | -- | -- | -0.608 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 151.11 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 9 |
| 3 | 153.47 | temperature | 20.0 | 270 | > th | dose independent | rect. | 20 | 15 |
| 26 | 160.61 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 20 | 14 |
| 35 | 161.45 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 1 | 10 |
| 40 | 161.86 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 22 | 14 |
| 71 | 164.12 | temperature | 25.0 | 90 | < th | dose dependent | sin | 6 | NA |
| 114 | 165.99 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 117 | 166.13 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 9 |
| 121 | 166.37 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 125 | 166.49 | temperature | 20.0 | 270 | > th | dose independent | sin | 7 | NA |
| 130 | 166.72 | temperature | 20.0 | 270 | < th | dose independent | sin | 7 | NA |
| 131 | 166.76 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 136 | 166.90 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 139 | 167.00 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 152 | 167.34 | temperature | 15.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 154 | 167.39 | temperature | 20.0 | 270 | < th | dose independent | rect. | 23 | 11 |
| 160 | 167.52 | wind | 1.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 162 | 167.54 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 278 | 168.55 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 293 | 168.61 | temperature | 20.0 | 270 | < th | dose independent | rect. | 23 | 16 |
| 307 | 168.76 | temperature | 20.0 | 270 | < th | dose independent | rect. | 23 | 18 |
| 324 | 168.89 | temperature | 20.0 | 90 | > th | dose dependent | sin | 8 | NA |
| 364 | 169.17 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 5 |
| 366 | 169.17 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 5 |
| 391 | 169.35 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 6 |
| 414 | 169.51 | temperature | 20.0 | 270 | > th | dose independent | rect. | 4 | 22 |
| 422 | 169.56 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 423 | 169.57 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 5 |
| 433 | 169.66 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 5 |
| 495 | 169.97 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 6 |
| 552 | 170.19 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 583 | 170.31 | humidity | 60.0 | 4320 | > th | dose dependent | rect. | 10 | 2 |
| 603 | 170.40 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 3 |
| 604 | 170.40 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 3 |
| 623 | 170.47 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 645 | 170.54 | temperature | 20.0 | 14400 | > th | dose dependent | sin | 23 | NA |
| 676 | 170.64 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 723 | 170.80 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 724 | 170.80 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 3 |
| 725 | 170.80 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 6 |
| 734 | 170.83 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 779 | 170.94 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 787 | 170.99 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 791 | 171.00 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 816 | 171.09 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 820 | 171.09 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 9 |
| 895 | 171.32 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 9 |
| 900 | 171.34 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 10 | 2 |
| 914 | 171.38 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 12 | 2 |
| 932 | 171.44 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 9 |