BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0175600 Os03g0175600|AK059981
(310 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0175600 Similar to Nit protein 2 (CUA002) 573 e-164
Os06g0206000 Nitrilase/cyanide hydratase and apolipoprotein... 338 3e-93
AK107586 226 1e-59
Os12g0502500 Nitrilase/cyanide hydratase and apolipoprotein... 136 2e-32
Os02g0533900 Similar to Carbon-nitrogen hydrolase family pr... 82 5e-16
>Os03g0175600 Similar to Nit protein 2 (CUA002)
Length = 310
Score = 573 bits (1477), Expect = e-164, Method: Compositional matrix adjust.
Identities = 280/310 (90%), Positives = 280/310 (90%)
Query: 1 MATAASFRPEXXXXXXXXXXXXXXLSKFKVALCQLSVTADKARNXXXXXXXXXXXXXXXX 60
MATAASFRPE LSKFKVALCQLSVTADKARN
Sbjct: 1 MATAASFRPEAARSPPAVQPPAPPLSKFKVALCQLSVTADKARNIARAREAIEAAAAGGA 60
Query: 61 KLVLLPEIWNGPYSNDSFPEYAEDIEAGGDAAPSFSMMSEVARSLQITLVGGSISERSGN 120
KLVLLPEIWNGPYSNDSFPEYAEDIEAGGDAAPSFSMMSEVARSLQITLVGGSISERSGN
Sbjct: 61 KLVLLPEIWNGPYSNDSFPEYAEDIEAGGDAAPSFSMMSEVARSLQITLVGGSISERSGN 120
Query: 121 KLYNTCCVFGSDGELKGKHRKIHLFDIDIPGKITFKESKTLTAGQDLTVVDTDVGRIGIG 180
KLYNTCCVFGSDGELKGKHRKIHLFDIDIPGKITFKESKTLTAGQDLTVVDTDVGRIGIG
Sbjct: 121 KLYNTCCVFGSDGELKGKHRKIHLFDIDIPGKITFKESKTLTAGQDLTVVDTDVGRIGIG 180
Query: 181 ICYDIRFQELAMLYAARGAHLLCYPGAFNMTTGPLHWELLQRARAADNQLFVATCAPARD 240
ICYDIRFQELAMLYAARGAHLLCYPGAFNMTTGPLHWELLQRARAADNQLFVATCAPARD
Sbjct: 181 ICYDIRFQELAMLYAARGAHLLCYPGAFNMTTGPLHWELLQRARAADNQLFVATCAPARD 240
Query: 241 TSAGYIAWGHSTLVGPFGEVIATAEHEETTIMAEIDYSLIDQRRQFLPLQYQRRGDLYQL 300
TSAGYIAWGHSTLVGPFGEVIATAEHEETTIMAEIDYSLIDQRRQFLPLQYQRRGDLYQL
Sbjct: 241 TSAGYIAWGHSTLVGPFGEVIATAEHEETTIMAEIDYSLIDQRRQFLPLQYQRRGDLYQL 300
Query: 301 VDVQRSGSDE 310
VDVQRSGSDE
Sbjct: 301 VDVQRSGSDE 310
>Os06g0206000 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
domain containing protein
Length = 287
Score = 338 bits (867), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 157/238 (65%), Positives = 192/238 (80%), Gaps = 4/238 (1%)
Query: 63 VLLPEIWNGPYSNDSFPEYAEDIEAGGDAAPSFSMMSEVARSLQITLVGGSISERSGNKL 122
VL EIWN PYS ++ P + EDI+ G A+PS SM+SEVA +IT+VGGSI ERS +L
Sbjct: 16 VLFQEIWNCPYSMETLPSHGEDIDGG--ASPSVSMLSEVAARRRITIVGGSIPERSSGRL 73
Query: 123 YNTCCVFGSDGELKGKHRKIHLFDIDIPGKITFKESKTLTAGQDLTVVDTDVGRIGIGIC 182
+NTCCV G DG++K KHRK+HLF+IDIPG ITF+ES T TAGQ+ T+VDTDVGRIGIGIC
Sbjct: 74 FNTCCVIGPDGQIKAKHRKLHLFEIDIPGDITFRESDTFTAGQEPTIVDTDVGRIGIGIC 133
Query: 183 YDIRFQELAMLYAARGAHLLCYPGAFNMTTGPLHWELLQRARAADNQLFVATCAPARDTS 242
+DIRF ELAMLY +RGAHL+CYP AFNM+TG L W+L+Q++RA DNQLFV TC+PARD +
Sbjct: 134 HDIRFPELAMLYRSRGAHLICYPSAFNMSTGQLLWDLMQKSRAVDNQLFVVTCSPARDPN 193
Query: 243 A--GYIAWGHSTLVGPFGEVIATAEHEETTIMAEIDYSLIDQRRQFLPLQYQRRGDLY 298
A Y+ WGHS+L+GPFGEVIATA HEE T++ EID+S+I R LPL+ QRR DLY
Sbjct: 194 AESDYMIWGHSSLIGPFGEVIATAGHEEATVVGEIDHSMIQTIRDNLPLEMQRREDLY 251
>AK107586
Length = 372
Score = 226 bits (577), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 137/359 (38%), Positives = 177/359 (49%), Gaps = 86/359 (23%)
Query: 25 LSKFKVALCQLSVTA-DKARN----------XXXXXXXXXXXXXXXXKLVLLPEIWNGPY 73
L K VAL QL T+ DKA N +V+LPE +N PY
Sbjct: 9 LQKTSVALIQLGSTSFDKAFNLKRARDAVLRAAATRPGATASISAPVGMVVLPECFNSPY 68
Query: 74 SNDSFPEYAED-----------------------------IEAGGDAA------------ 92
F EYAE I+A D +
Sbjct: 69 GVKYFAEYAESFGGAYQKIKKPLPSALARMGKGKEEIRWTIDASTDPSAESRLAREKGVG 128
Query: 93 -------------PSFSMMSEVARSLQITLVGGSISER---SGNKLYNTCCVFGSDGELK 136
PS M+SE AR ++ LVGGS+ ER +GN +YN+ CVF +G+L
Sbjct: 129 KPVDIDERIQKLSPSLKMLSETAREAKVVLVGGSVPERDDLTGN-IYNSSCVFNEEGQLI 187
Query: 137 GKHRKIHLFDIDIPGKITFKESKTLTAGQDLTVVDTDVGRIGIGICYDIRFQELAMLYAA 196
HRK+HLFDIDIPGK+TF+ES+TL G +T+ D +GR G+GICYD+RF E AM+
Sbjct: 188 SIHRKLHLFDIDIPGKMTFQESETLAGGDRVTLFDCSLGRFGLGICYDLRFPEPAMIAGR 247
Query: 197 RGAHLLCYPGAFNMTTGPLHWELLQRARAADNQLFVATCAPARDT--------------- 241
GA + YPGAFN TTGP+ WELL RARA DNQ++ C+PAR +
Sbjct: 248 LGAGCMIYPGAFNTTTGPVSWELLLRARATDNQVYTLGCSPARPSQQAMDGESTDKDGWR 307
Query: 242 --SAGYIAWGHSTLVGPFGEVIATAEHEETTIMAEIDYSLIDQRRQFLPLQYQRRGDLY 298
Y AWGHST+VGP G+V A EE T+ +D + Q R+ +P+ QRR D+Y
Sbjct: 308 QGEKAYPAWGHSTVVGPLGDVKAKLAEEEDTLFFTLDPEEVAQTRRNIPISTQRRFDVY 366
>Os12g0502500 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
domain containing protein
Length = 323
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 134/274 (48%), Gaps = 11/274 (4%)
Query: 29 KVALCQLSVTADKARNXXXXXXXXXXXXXXXXKLVLLPEIWNGPYSNDSFP-EYAEDIEA 87
+V + Q++ D N K + PE+++ S D + AE ++
Sbjct: 47 RVGVVQMTSVGDLDANYATCSRLAKEAASSGVKFLCFPEVFSFIGSKDGESIKIAEPLDG 106
Query: 88 GGDAAPSFSMMSEVARSLQITLVGGSISER--SGNKLYNTCCVFGSDGELKGKHRKIHLF 145
P +A+ + L G E+ + YNT + GE++ +RKIHLF
Sbjct: 107 -----PIMQRYCSLAKESSMWLSLGGFQEKGPDDSHQYNTHVLIDDSGEIRSSYRKIHLF 161
Query: 146 DIDIPGKITFKESKTLTAGQDLTVVDTDVGRIGIGICYDIRFQEL-AMLYAARGAHLLCY 204
D+D+PG + +KES+ TAG + VD+ GR+G+ +CYD+RF EL L A +L
Sbjct: 162 DVDVPGNMVYKESRFTTAGDTVVAVDSPFGRLGLTVCYDLRFPELYQCLRFKHQAQVLLV 221
Query: 205 PGAFNMTTGPLHWELLQRARAADNQLFVATCAPARDTSAGYIAWGHSTLVGPFGEVIATA 264
P AF TG HWE+L RARA + Q +V A A + ++G S ++ P+G VIA
Sbjct: 222 PSAFTKVTGEAHWEILLRARAIETQCYVIAAAQAGKHNEKRESYGDSIIIDPWGTVIARL 281
Query: 265 EHEETT--IMAEIDYSLIDQRRQFLPLQYQRRGD 296
+T +A++D S ++ R +P+ R+ D
Sbjct: 282 PDRLSTGFAVADVDLSKVEAVRTKMPISEHRKFD 315
>Os02g0533900 Similar to Carbon-nitrogen hydrolase family protein
Length = 301
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 125/295 (42%), Gaps = 29/295 (9%)
Query: 26 SKFKVALCQLSVTADKARNXXXXXXXXXXXXXXXXKLVLLPEIWNGPYSNDS----FPEY 81
SK VA Q + T ++ N +VL+ E++ G Y + F +
Sbjct: 9 SKVSVAAVQFACTDVESENVDTAERLIREAHKKGANIVLVQELFEGQYFCQAQRLDFFQR 68
Query: 82 AEDIEAGGDAAPSFSMMSEVARSLQITLVGGSISERSGNKLYNTCCVFGSDGELKGKHRK 141
A+ + P+ ++A+ L++ ++ S E + N YN+ + +DG G +RK
Sbjct: 69 AKPYKGN----PTIIRFQKLAKELEV-VIPVSFFEEANNAHYNSVAIIDADGTDLGLYRK 123
Query: 142 IHLFDIDIPGKITFKESKTLTAGQD-LTVVDTDVGRIGIGICYDIRFQELAMLYAARGAH 200
H IP ++E G T IG+GIC+D F E A +GA
Sbjct: 124 SH-----IPDGPGYQEKFYFNPGDTGFKAFKTKYATIGVGICWDQWFPECARAMVLQGAE 178
Query: 201 LLCYPGAF------NMTTGPLHWELLQRARAADNQL-FVATCAPARDT------SAGYIA 247
+L YP A N HW+ + + A N + VA+ R+T +
Sbjct: 179 ILFYPTAIGSEPQDNNLDSREHWKRVMQGHAGANLVPLVASNRIGRETVETEHGESTITF 238
Query: 248 WGHSTLVGPFGEVIATA-EHEETTIMAEIDYSLIDQRRQFLPLQYQRRGDLYQLV 301
+G+S + GP GE++ A + +E ++AE D I R + RR DLY+++
Sbjct: 239 FGNSFIAGPTGEIVKLANDKDEDVLVAEFDLDEIKSTRHGWGIFRDRRPDLYKVL 293
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.136 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,310,019
Number of extensions: 362431
Number of successful extensions: 679
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 672
Number of HSP's successfully gapped: 5
Length of query: 310
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 209
Effective length of database: 11,762,187
Effective search space: 2458297083
Effective search space used: 2458297083
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 156 (64.7 bits)