BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0163100 Os03g0163100|AK065571
(858 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0163100 Protein of unknown function DUF1012 family pro... 1680 0.0
Os03g0843600 Protein of unknown function DUF1012 family pro... 183 5e-46
Os01g0870100 Protein of unknown function DUF1012 family pro... 173 5e-43
>Os03g0163100 Protein of unknown function DUF1012 family protein
Length = 858
Score = 1680 bits (4352), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 819/858 (95%), Positives = 819/858 (95%)
Query: 1 MRSQLDAAAVSSXXXXXXXXXXXXXXXXXXXXFHAFPXXXXXXXXXXXXXXXXXXXHLPS 60
MRSQLDAAAVSS FHAFP HLPS
Sbjct: 1 MRSQLDAAAVSSPPRAPAARRCLRPALPLALRFHAFPGQVRVYRGGGIGVGVRSAGHLPS 60
Query: 61 KRGLVRVFDSAMGMNEKVTNGNLEQPTTSTSGNNPSFPAEGNFNVVTVVSITFCVLHKIV 120
KRGLVRVFDSAMGMNEKVTNGNLEQPTTSTSGNNPSFPAEGNFNVVTVVSITFCVLHKIV
Sbjct: 61 KRGLVRVFDSAMGMNEKVTNGNLEQPTTSTSGNNPSFPAEGNFNVVTVVSITFCVLHKIV 120
Query: 121 IGQMQLMTKFLPWMSHNITSLPLACISDPMKKPVPLKLDVSFPQLPDIRWSISRLYYLFN 180
IGQMQLMTKFLPWMSHNITSLPLACISDPMKKPVPLKLDVSFPQLPDIRWSISRLYYLFN
Sbjct: 121 IGQMQLMTKFLPWMSHNITSLPLACISDPMKKPVPLKLDVSFPQLPDIRWSISRLYYLFN 180
Query: 181 SQLERNIALSIITLMITCFSLVVVGGFLFHKFRKNQQSLEECFWEAWACLISSSTHLRQK 240
SQLERNIALSIITLMITCFSLVVVGGFLFHKFRKNQQSLEECFWEAWACLISSSTHLRQK
Sbjct: 181 SQLERNIALSIITLMITCFSLVVVGGFLFHKFRKNQQSLEECFWEAWACLISSSTHLRQK 240
Query: 241 TRIERVLGFFLAIWGILFYSRLLSATTEQFRIQMHKVREGAQQQVIEDDHIIICGVNSHL 300
TRIERVLGFFLAIWGILFYSRLLSATTEQFRIQMHKVREGAQQQVIEDDHIIICGVNSHL
Sbjct: 241 TRIERVLGFFLAIWGILFYSRLLSATTEQFRIQMHKVREGAQQQVIEDDHIIICGVNSHL 300
Query: 301 PSILNQLNKFHESSIRLGTATARKQRILLLSDLPRKQIEKLGDSFAKDLNHIDVFTKSCS 360
PSILNQLNKFHESSIRLGTATARKQRILLLSDLPRKQIEKLGDSFAKDLNHIDVFTKSCS
Sbjct: 301 PSILNQLNKFHESSIRLGTATARKQRILLLSDLPRKQIEKLGDSFAKDLNHIDVFTKSCS 360
Query: 361 LSLTKSFERAAANKAKSIIILPAKNERYEVDTDAFLSLLALQSLPQIASIPTIVEASNST 420
LSLTKSFERAAANKAKSIIILPAKNERYEVDTDAFLSLLALQSLPQIASIPTIVEASNST
Sbjct: 361 LSLTKSFERAAANKAKSIIILPAKNERYEVDTDAFLSLLALQSLPQIASIPTIVEASNST 420
Query: 421 TCDLLKSITGLNVQPVEMAASKLFVQCSRQKGLIKIYRHLLNYHKNVFNLFSFREVVGMK 480
TCDLLKSITGLNVQPVEMAASKLFVQCSRQKGLIKIYRHLLNYHKNVFNLFSFREVVGMK
Sbjct: 421 TCDLLKSITGLNVQPVEMAASKLFVQCSRQKGLIKIYRHLLNYHKNVFNLFSFREVVGMK 480
Query: 481 YVDVRRRIPDAVVCGIFRSGMMHFHPCEDEVLTEKDKLLLIAPVSWRRRAQSTFSNSPNG 540
YVDVRRRIPDAVVCGIFRSGMMHFHPCEDEVLTEKDKLLLIAPVSWRRRAQSTFSNSPNG
Sbjct: 481 YVDVRRRIPDAVVCGIFRSGMMHFHPCEDEVLTEKDKLLLIAPVSWRRRAQSTFSNSPNG 540
Query: 541 AQNSSHYSESTEGQRSSSMALEVNETRLNSIRKRPSKTLSKSNDYTLGPREHVLIVGWRP 600
AQNSSHYSESTEGQRSSSMALEVNETRLNSIRKRPSKTLSKSNDYTLGPREHVLIVGWRP
Sbjct: 541 AQNSSHYSESTEGQRSSSMALEVNETRLNSIRKRPSKTLSKSNDYTLGPREHVLIVGWRP 600
Query: 601 KVTDMIREYDNYLGPGSVLEILSETPIKERSSIVNPLMQKQLKNIKVNHQVGCPMNYDTL 660
KVTDMIREYDNYLGPGSVLEILSETPIKERSSIVNPLMQKQLKNIKVNHQVGCPMNYDTL
Sbjct: 601 KVTDMIREYDNYLGPGSVLEILSETPIKERSSIVNPLMQKQLKNIKVNHQVGCPMNYDTL 660
Query: 661 KEAIIKFKKSRKHDQNVPFSVVVISDKDWLGGDTAQVDKQLAYTLLLAENICQKHDIKVE 720
KEAIIKFKKSRKHDQNVPFSVVVISDKDWLGGDTAQVDKQLAYTLLLAENICQKHDIKVE
Sbjct: 661 KEAIIKFKKSRKHDQNVPFSVVVISDKDWLGGDTAQVDKQLAYTLLLAENICQKHDIKVE 720
Query: 721 HLVSEIVDTGLGKQMSRIKPSLSFIGAEEVMSLVTAQVAGSSELNEVWKDILNAEGDEIY 780
HLVSEIVDTGLGKQMSRIKPSLSFIGAEEVMSLVTAQVAGSSELNEVWKDILNAEGDEIY
Sbjct: 721 HLVSEIVDTGLGKQMSRIKPSLSFIGAEEVMSLVTAQVAGSSELNEVWKDILNAEGDEIY 780
Query: 781 IKEIGFYMKEGEKISFSELTERAILRREVAVGYVKGKKQYINPTNKLELLSFEMTDQLIV 840
IKEIGFYMKEGEKISFSELTERAILRREVAVGYVKGKKQYINPTNKLELLSFEMTDQLIV
Sbjct: 781 IKEIGFYMKEGEKISFSELTERAILRREVAVGYVKGKKQYINPTNKLELLSFEMTDQLIV 840
Query: 841 ISEFEGEQPVVRGGDTST 858
ISEFEGEQPVVRGGDTST
Sbjct: 841 ISEFEGEQPVVRGGDTST 858
>Os03g0843600 Protein of unknown function DUF1012 family protein
Length = 893
Score = 183 bits (465), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 165/671 (24%), Positives = 308/671 (45%), Gaps = 104/671 (15%)
Query: 215 NQQSLEECFWEAWACLISSSTHLRQKTRIERVLGFFLAIWGILFYSRLLSATTEQFRIQM 274
N SL +C W +W + S H + +++ ++I G+L ++ +L T+ +
Sbjct: 287 NDDSLLDCLWLSWTFVADSGNHANAEGFGPKLVSVSISIGGMLVFAMMLGLVTDSISEKF 346
Query: 275 HKVREGAQQQVIEDDHIIICGVNSHLPSILNQLNKFHESSIRLGTATARKQRILLLSDLP 334
+R+G + +VIE H ++ G + L S+LNQ+ +ES LG T I+++++
Sbjct: 347 DSLRKG-RSEVIEQSHTLVLGWSDKLGSLLNQIAIANES---LGGGT-----IVVMAEKD 397
Query: 335 RKQIEKLGDSFAKDLNHIDVFTKSCSLSLTKSFERAAANKAKSIIILPAKNERYEVDTDA 394
++++E DL + +S S + ++ + +KA++I++L + + D A
Sbjct: 398 KEEMEADIAKMEFDLKGTAIICRSGSPLILADLKKVSVSKARAIVVLAEEGNADQSDARA 457
Query: 395 FLSLLALQSLPQIASIPTIVEASNSTTCDLLKSITGLNVQPV--EMAASKLFVQCSRQKG 452
++L+L + + +VE S+ L+K + G V+ V +L +QC+RQ G
Sbjct: 458 LRTVLSLTGVKEGLRGHIVVELSDLDNEVLVKLVGGDLVETVVAHDVIGRLMIQCARQPG 517
Query: 453 LIKIYRHLLNYHKNVFNLFSFREVVGMKYVDVRRRIPDAVVCGI---FRSGMMHFHPCED 509
L +I+ +L + F + + ++ GM++ DV PDA+ CGI G + +P +
Sbjct: 518 LAQIWEDILGFENCEFYIKRWPQLDGMQFEDVLISFPDAIPCGIKVASYGGKIILNPDDF 577
Query: 510 EVLTEKDKLLLIAPVSWRRRAQSTFSNSPNGAQNSSHYSESTEGQRSSSMALEVNETRLN 569
VL E D++L+IA T++ +P
Sbjct: 578 YVLQEGDEVLVIA------EDDDTYAPAP------------------------------- 600
Query: 570 SIRKRPSKTLSKSNDYTLGPREHVLIVGWRPKVTDMIREYDNYLGPGSVLEILSETP--I 627
+ K L K P E +L GWR + DMI D +L PGS L + ++ P
Sbjct: 601 -LPKVMRGYLPKDFVVPKSP-ERILFCGWRRDMEDMIMVLDAFLAPGSELWMFNDVPEMD 658
Query: 628 KERSSIVNPLMQKQLKNIKVNHQVGCPMNYDTLKEAIIKFKKSRKHDQNVPF----SVVV 683
+ER I L +L+NI + H+ G A+I R+H +++P S+++
Sbjct: 659 RERKLIDGGLDFSRLENITLVHREG---------NAVI-----RRHLESLPLESFDSILI 704
Query: 684 ISDKDWLGGDTAQVDKQLAYTLLLAENICQK----HDIKVEH------------------ 721
++D+ + Q D + TLLL +I K + V H
Sbjct: 705 LADES-VEDSAIQADSRSLATLLLIRDIQAKRLPFREAMVSHVTRGSFCEGSWIGEMQQA 763
Query: 722 -----LVSEIVDTGLGKQMSRIKPSLSFIGAEEVMSLVTAQVAGSSELNEVWKDILNAEG 776
++SEI+D +S K S ++ + E++S+ A VA ++N+V +++ +G
Sbjct: 764 SDKSVIISEILDPRTKNLLSVSKIS-DYVLSNELVSMALAMVAEDRQINDVLEELFAEQG 822
Query: 777 DEIYIKEIGFYMKEGEKISFSELTERAILRREVAVGY--VKGKKQYINPTNKLELLSFEM 834
+E+ I+ Y++E E+++F E+ R R+E+ +GY V ++ INP +K+ +
Sbjct: 823 NEMQIRPADLYLREDEELNFFEVMLRGRQRKEIVIGYRLVDAERAIINPPDKVSRRRWSA 882
Query: 835 TDQLIVISEFE 845
D +VI+E E
Sbjct: 883 KDVFVVITEKE 893
>Os01g0870100 Protein of unknown function DUF1012 family protein
Length = 965
Score = 173 bits (439), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 164/662 (24%), Positives = 302/662 (45%), Gaps = 103/662 (15%)
Query: 221 ECFWEAWACLISSSTHLRQKTRIERVLGFFLAIWGILFYSRLLSATTEQFRIQMHKVREG 280
E W +W + S H Q R++ ++ G+L ++ +L ++ ++ R+G
Sbjct: 344 EALWLSWTFVADSGNHADQVGLGPRIVSVSISSGGMLVFATMLGLVSDAISEKVDSWRKG 403
Query: 281 AQQQVIEDDHIIICGVNSHLPSILNQLNKFHESSIRLGTATARKQRILLLSDLPRKQIEK 340
+ +VIE +HI+I G + L S+L QL ++S +G +++L++ ++++E
Sbjct: 404 -KSEVIEVNHILILGWSDKLGSLLKQLAIANKS---IGGGV-----VVVLAERDKEEMEM 454
Query: 341 LGDSFAKDLNHIDVFTKSCSLSLTKSFERAAANKAKSIIILPAKNERYEVDTDAFLSLLA 400
D V +S S + ++ + +KA++II+L + + D A +L+
Sbjct: 455 DIGKLEFDFMGTSVICRSGSPLILADLKKVSVSKARAIIVLASDENADQSDARALRVVLS 514
Query: 401 LQSLPQIASIPTIVEASNSTTCDLLKSITGLNVQPV--EMAASKLFVQCSRQKGLIKIYR 458
L + + +VE S+ L+K + G ++ V +L +QC+ Q GL +I+
Sbjct: 515 LTGVKEGLRGHVVVEMSDLDNEPLVKLVGGELIETVVAHDVIGRLMIQCALQPGLAQIWE 574
Query: 459 HLLNYHKNVFNLFSFREVVGMKYVDVRRRIPDAVVCGI---FRSGMMHFHPCEDEVLTEK 515
+L + F + + E+ GM++ DV PDAV CG+ ++G + +P D VL E
Sbjct: 575 DILGFENAEFYIKRWPELDGMRFGDVLISFPDAVPCGVKIASKAGKILMNPDNDYVLQEG 634
Query: 516 DKLLLIAPVSWRRRAQSTFSNSPNGAQNSSHYSESTEGQRSSSMALEVNETRLNSIRKRP 575
D++L+I A++ Y ++ L +RK
Sbjct: 635 DEVLVI-------------------AEDDDTYVPAS----------------LPQVRKGF 659
Query: 576 SKTLSKSNDYTLGPREHVLIVGWRPKVTDMIREYDNYLGPGSVLEILSETPIKERS-SIV 634
+ Y E +L GWR + DMI + +L PGS L + +E P KER +
Sbjct: 660 LPNIPTPPKYP----EKILFCGWRRDIHDMIMVLEAFLAPGSELWMFNEVPEKERERKLT 715
Query: 635 NPLMQ-KQLKNIKVNHQVGCPMNYDTLKEAIIKFKKSRKHDQNVPF----SVVVISDKDW 689
+ M L NIK+ H+ G A+I R+H +++P S+++++D+
Sbjct: 716 DGGMDIYGLTNIKLVHKEG---------NAVI-----RRHLESLPLETFDSILILADES- 760
Query: 690 LGGDTAQVDKQLAYTLLLAENI-------------------CQKHDIK-VEH------LV 723
+ D + TLLL +I C I+ ++H ++
Sbjct: 761 VEDSIVHSDSRSLATLLLIRDIQSKRLPSKELKSPLRYNGFCHSSWIREMQHASDKSIII 820
Query: 724 SEIVDTGLGKQMSRIKPSLSFIGAEEVMSLVTAQVAGSSELNEVWKDILNAEGDEIYIKE 783
SEI+D+ +S K S ++ + E++S+ A VA ++N V +++ EG+E+ I+
Sbjct: 821 SEILDSRTRNLVSVSKIS-DYVLSNELVSMALAMVAEDKQINRVLEELFAEEGNEMCIRS 879
Query: 784 IGFYMKEGEKISFSELTERAILRREVAVGY--VKGKKQYINPTNKLELLSFEMTDQLIVI 841
FY+ E E++SF ++ RA R EV +GY + INP K E+ + + D +VI
Sbjct: 880 AEFYLYEQEELSFFDIMVRARERDEVVIGYRLANDDQAIINPEQKSEIRKWSLDDVFVVI 939
Query: 842 SE 843
S+
Sbjct: 940 SK 941
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.134 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 25,037,432
Number of extensions: 967713
Number of successful extensions: 2463
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 2452
Number of HSP's successfully gapped: 5
Length of query: 858
Length of database: 17,035,801
Length adjustment: 109
Effective length of query: 749
Effective length of database: 11,344,475
Effective search space: 8497011775
Effective search space used: 8497011775
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 160 (66.2 bits)