Os03g0163100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1012 family protein.
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Os03g0163100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1012 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 109.95 | 0.493 | 10.3 | -2.78 | 2.07 | -0.65 | -2.14 | 1.41 | -0.573 | 22.5 | 88.56 | 347 | -- | -- |
| 113.58 | 0.496 | 10.3 | -2.7 | 2.05 | -0.565 | -2.25 | -- | -0.554 | 22.5 | 86.44 | 386 | -- | -- |
| 124.09 | 0.519 | 10.3 | -2.87 | 1.89 | -0.683 | -- | 2.37 | -0.536 | 22.5 | 75.64 | 679 | -- | -- |
| 133.24 | 0.538 | 10.3 | -2.6 | 2.06 | -0.651 | -- | -- | -0.555 | 22.8 | 84.73 | 348 | -- | -- |
| 246.18 | 0.731 | 10.2 | -2.9 | -- | -2.48 | -- | 2.94 | -0.709 | -- | 71.36 | 822 | -- | -- |
| 120.52 | 0.515 | 10.3 | -2.78 | 2.17 | -- | -2.39 | -- | -0.464 | 22.1 | -- | -- | -- | -- |
| 142.83 | 0.56 | 10.3 | -2.69 | 2.18 | -- | -- | -- | -0.46 | 22.1 | -- | -- | -- | -- |
| 263.25 | 0.756 | 10.2 | -2.63 | -- | -2.46 | -- | -- | -0.679 | -- | 72 | 831 | -- | -- |
| 308.33 | 0.818 | 10.2 | -- | 2.07 | -0.849 | -- | -- | -0.292 | 22.9 | 85.45 | 371 | -- | -- |
| 429.26 | 0.968 | 10.2 | -2.66 | -- | -- | -- | -- | -0.456 | -- | -- | -- | -- | -- |
| 332.96 | 0.854 | 10.2 | -- | 2.16 | -- | -- | -- | -0.16 | 22 | -- | -- | -- | -- |
| 431.92 | 0.968 | 10.2 | -- | -- | -2.57 | -- | -- | -0.515 | -- | 81.86 | 780 | -- | -- |
| 615.34 | 1.16 | 10.1 | -- | -- | -- | -- | -- | -0.161 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 108.78 | humidity | 50 | 720 | > th | dose dependent | rect. | 19 | 11 |
| 7 | 109.38 | humidity | 50 | 720 | > th | dose dependent | rect. | 19 | 6 |
| 14 | 109.78 | humidity | 90 | 270 | > th | dose dependent | rect. | 4 | 22 |
| 15 | 109.79 | atmosphere | 995 | 720 | > th | dose independent | rect. | 4 | 17 |
| 20 | 109.90 | humidity | 70 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 21 | 109.93 | atmosphere | 1015 | 720 | < th | dose dependent | rect. | 16 | 3 |
| 26 | 110.11 | atmosphere | 995 | 720 | > th | dose independent | rect. | 13 | 17 |
| 49 | 110.50 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 5 |
| 51 | 110.52 | atmosphere | 995 | 720 | > th | dose independent | rect. | 4 | 19 |
| 56 | 110.64 | humidity | 90 | 720 | > th | dose dependent | rect. | 22 | 1 |
| 58 | 110.66 | humidity | 70 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 78 | 110.83 | humidity | 80 | 1440 | > th | dose independent | rect. | 10 | 17 |
| 100 | 110.92 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 5 |
| 111 | 110.99 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 5 |
| 125 | 111.04 | humidity | 80 | 270 | > th | dose dependent | rect. | 20 | 20 |
| 134 | 111.09 | atmosphere | 995 | 720 | > th | dose independent | rect. | 9 | 7 |
| 143 | 111.13 | humidity | 80 | 1440 | < th | dose independent | rect. | 13 | 2 |
| 153 | 111.17 | humidity | 80 | 1440 | > th | dose independent | rect. | 13 | 2 |
| 161 | 111.20 | atmosphere | 995 | 720 | > th | dose independent | rect. | 9 | 16 |
| 165 | 111.23 | atmosphere | 995 | 720 | > th | dose independent | rect. | 13 | 8 |
| 177 | 111.27 | humidity | 80 | 1440 | < th | dose independent | rect. | 10 | 17 |
| 180 | 111.27 | humidity | 90 | 270 | > th | dose dependent | rect. | 12 | 22 |
| 182 | 111.28 | humidity | 90 | 270 | > th | dose dependent | rect. | 14 | 20 |
| 185 | 111.29 | humidity | 90 | 270 | > th | dose dependent | rect. | 9 | 23 |
| 206 | 111.34 | humidity | 80 | 1440 | < th | dose independent | rect. | 10 | 14 |
| 223 | 111.36 | humidity | 90 | 270 | > th | dose dependent | rect. | 20 | 23 |
| 230 | 111.38 | humidity | 70 | 720 | > th | dose dependent | sin | 12 | NA |
| 236 | 111.39 | humidity | 90 | 270 | > th | dose dependent | no | NA | NA |
| 249 | 111.40 | humidity | 90 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 256 | 111.42 | humidity | 90 | 720 | > th | dose dependent | rect. | 9 | 17 |
| 281 | 111.46 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 4 |
| 285 | 111.46 | humidity | 70 | 720 | > th | dose dependent | rect. | 14 | 17 |
| 292 | 111.48 | atmosphere | 995 | 720 | > th | dose independent | rect. | 13 | 10 |
| 300 | 111.49 | humidity | 90 | 270 | < th | dose independent | rect. | 21 | 22 |
| 302 | 111.49 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 17 |
| 324 | 111.53 | atmosphere | 995 | 720 | > th | dose independent | rect. | 11 | 20 |
| 331 | 111.54 | atmosphere | 995 | 720 | > th | dose independent | rect. | 11 | 14 |
| 332 | 111.54 | atmosphere | 995 | 720 | > th | dose independent | rect. | 17 | 23 |
| 335 | 111.54 | humidity | 90 | 720 | > th | dose dependent | rect. | 14 | 12 |
| 345 | 111.56 | humidity | 80 | 270 | > th | dose dependent | sin | 9 | NA |
| 429 | 111.70 | atmosphere | 1000 | 720 | < th | dose independent | rect. | 16 | 4 |
| 469 | 111.75 | wind | 1 | 90 | < th | dose dependent | rect. | 24 | 1 |
| 509 | 111.83 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 16 | 9 |
| 520 | 111.85 | atmosphere | 995 | 720 | > th | dose dependent | rect. | 11 | 5 |
| 525 | 111.86 | humidity | 80 | 1440 | > th | dose independent | sin | 18 | NA |
| 541 | 111.88 | humidity | 80 | 720 | > th | dose independent | rect. | 20 | 10 |
| 549 | 111.89 | humidity | 80 | 1440 | > th | dose independent | rect. | 20 | 20 |
| 561 | 111.90 | atmosphere | 1000 | 270 | < th | dose dependent | rect. | 17 | 9 |
| 567 | 111.92 | humidity | 90 | 270 | > th | dose independent | rect. | 2 | 22 |
| 590 | 111.96 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 619 | 112.02 | humidity | 90 | 720 | > th | dose independent | rect. | 22 | 1 |
| 643 | 112.05 | humidity | 90 | 720 | > th | dose dependent | sin | 16 | NA |
| 670 | 112.07 | atmosphere | 995 | 720 | > th | dose independent | rect. | 3 | 22 |
| 694 | 112.11 | humidity | 80 | 1440 | < th | dose independent | sin | 18 | NA |
| 742 | 112.16 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 18 | 10 |
| 774 | 112.19 | humidity | 70 | 30 | > th | dose dependent | rect. | 4 | 22 |
| 785 | 112.21 | humidity | 90 | 270 | > th | dose independent | rect. | 12 | 22 |
| 792 | 112.22 | humidity | 90 | 270 | > th | dose independent | rect. | 14 | 20 |
| 911 | 112.35 | humidity | 80 | 1440 | < th | dose independent | rect. | 20 | 20 |
| 940 | 112.38 | atmosphere | 1000 | 270 | > th | dose independent | sin | 15 | NA |
| 941 | 112.38 | atmosphere | 1000 | 720 | > th | dose independent | rect. | 18 | 5 |
| 955 | 112.39 | humidity | 90 | 270 | < th | dose independent | rect. | 7 | 23 |
| 956 | 112.39 | atmosphere | 995 | 720 | > th | dose independent | rect. | 9 | 23 |
| 960 | 112.39 | atmosphere | 995 | 270 | > th | dose dependent | rect. | 12 | 10 |
| 992 | 112.43 | humidity | 60 | 14400 | > th | dose independent | rect. | 20 | 9 |