BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0163100 Os03g0163100|AK065571
(858 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G43745.1 | chr5:17569435-17574954 REVERSE LENGTH=818 892 0.0
AT5G02940.1 | chr5:684671-689674 REVERSE LENGTH=814 838 0.0
AT5G49960.1 | chr5:20324173-20327687 REVERSE LENGTH=825 169 6e-42
>AT5G43745.1 | chr5:17569435-17574954 REVERSE LENGTH=818
Length = 817
Score = 892 bits (2305), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/745 (58%), Positives = 559/745 (75%), Gaps = 23/745 (3%)
Query: 117 HKIVIGQMQLMTKF---------LPWMSHNI--TSLPLACISDPMKKPVPLKLDVSFPQL 165
+K+VIG + L F LP + N LP AC S+ + P PLKLDVSFP
Sbjct: 83 YKVVIGCIPLYAVFRIAQKICQELPRLVQNSVGAGLPFACASNSL--PTPLKLDVSFPSF 140
Query: 166 PDIRWSISRLYYLFNSQLERNIALSIITLMITCFSLVVVGGFLFHKFRKNQQSLEECFWE 225
DIRW ++R YLFN QLE+NI ++ LMI C S V++GG LF KFRK+ LE+C WE
Sbjct: 141 QDIRWGLARFLYLFNIQLEKNIGTFLVALMIACVSFVIIGGLLFFKFRKDL-PLEDCLWE 199
Query: 226 AWACLISSSTHLRQKTRIERVLGFFLAIWGILFYSRLLSATTEQFRIQMHKVREGAQQQV 285
AWACLISSSTHL+QKTRIERV+GF LAIWGILFYSRLLS TEQFR M K+REGAQ QV
Sbjct: 200 AWACLISSSTHLKQKTRIERVIGFVLAIWGILFYSRLLSTMTEQFRYNMTKLREGAQMQV 259
Query: 286 IEDDHIIICGVNSHLPSILNQLNKFHESSIRLGTATARKQRILLLSDLPRKQIEKLGDSF 345
+E DHIIICG+NSHLP IL QLN +HE ++RLGTATARKQR+LL+SD PRKQ++KL +++
Sbjct: 260 LEADHIIICGINSHLPFILKQLNSYHEHAVRLGTATARKQRLLLMSDTPRKQMDKLAEAY 319
Query: 346 AKDLNHIDVFTKSCSLSLTKSFERAAANKAKSIIILPAKNERYEVDTDAFLSLLALQSLP 405
+KD NHID+ TKSCSL+LTKSFERAAA+ A++IIILP K +RYEVDTDAFLS+LALQ +
Sbjct: 320 SKDFNHIDILTKSCSLNLTKSFERAAASMARAIIILPTKGDRYEVDTDAFLSVLALQPIQ 379
Query: 406 QIASIPTIVEASNSTTCDLLKSITGLNVQPVEMAASKLFVQCSRQKGLIKIYRHLLNYHK 465
++ SIPTIVE S+ T DLLKSI+GL V+PVE SKLFVQCSRQK LIKIYRHLLNY K
Sbjct: 380 KMESIPTIVEVSSPNTYDLLKSISGLKVEPVENVTSKLFVQCSRQKDLIKIYRHLLNYSK 439
Query: 466 NVFNLFSFREVVGMKYVDVRRRIPDAVVCGIFRSGMMHFHPCEDEVLTEKDKLLLIAPVS 525
NVFNL SF +VG KY +R + VVCG+ R G ++FHP ++E L E DKLL IAP++
Sbjct: 440 NVFNLCSFPNLVGTKYRQLRLGFQEVVVCGLLRDGKVNFHPNDNEELMETDKLLFIAPLN 499
Query: 526 WRRRAQSTFSNSPNGAQNSSHYSESTEGQRSSSMALEVNETRLNSIRKRPSKTLSKSNDY 585
W+++ Q +++ + + T+ ++ E +RL+ I RP K+LSK +D
Sbjct: 500 WKKK-QLLYTD-----MKLENITVPTDTRKQ---VFEKKRSRLSKIIMRPRKSLSKGSDS 550
Query: 586 TLGPREHVLIVGWRPKVTDMIREYDNYLGPGSVLEILSETPIKERSSIVNPLMQKQLKNI 645
GP E +L++GWR V MI E+DNYLGPGS +EILS+ +++R + + + ++KNI
Sbjct: 551 VKGPTESILLLGWRGDVVQMIEEFDNYLGPGSSMEILSDVSLEDRRRVGDSIGSVKIKNI 610
Query: 646 KVNHQVGCPMNYDTLKEAIIKFKKSRKHDQNVPFSVVVISDKDWLGGDTAQVDKQLAYTL 705
+V+H+VG P+NYDTLK+ I++ K + +N+P +++VISD+DWL GD ++ DKQ AY+L
Sbjct: 611 QVSHKVGNPLNYDTLKQTIMRMKSKYRKGKNIPLTILVISDRDWLLGDPSRADKQSAYSL 670
Query: 706 LLAENICQKHDIKVEHLVSEIVDTGLGKQMSRIKPSLSFIGAEEVMSLVTAQVAGSSELN 765
LLAE+IC K +KV +L SEIVD+ LGKQ++ +KPSL+FI AEEVMSLVTAQVA +SELN
Sbjct: 671 LLAESICNKLGVKVHNLASEIVDSKLGKQITGLKPSLTFIAAEEVMSLVTAQVAENSELN 730
Query: 766 EVWKDILNAEGDEIYIKEIGFYMKEGEKISFSELTERAILRREVAVGYVKGKKQYINPTN 825
EVWKDIL+A+GDEIY+K++ YMKEGE SF+EL+ERA LRREVA+GY+KG K+ INP
Sbjct: 731 EVWKDILDADGDEIYVKDVELYMKEGENPSFTELSERAWLRREVAIGYIKGGKKMINPVP 790
Query: 826 KLELLSFEMTDQLIVISEFEGEQPV 850
K E LS EM D LIVISE EG+QP+
Sbjct: 791 KNEPLSLEMDDSLIVISELEGDQPI 815
>AT5G02940.1 | chr5:684671-689674 REVERSE LENGTH=814
Length = 813
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/773 (54%), Positives = 550/773 (71%), Gaps = 22/773 (2%)
Query: 81 GNLEQPTTSTSGNNPSFPAEGNFNVVTVVSITFCVLHKIVIGQMQLMTKFLPWMSHNI-- 138
G+ E P + N F + +V C+ V+ Q + + LP + N
Sbjct: 58 GDTEPPNKNFKDLNSKFYKSLPYKLVI-----GCIPLYAVLRIAQKIFQELPNLIQNSVK 112
Query: 139 TSLPLACISDPMKKPVPLKLDVSFPQLPDIRWSISRLYYLFNSQLERNIALSIITLMITC 198
LP AC S+ + K LK + P DI+W ++R YLFN+QLE+N+ + L+ITC
Sbjct: 113 AGLPFACASNAIDKHPLLK---AIPSSHDIKWGLARSSYLFNTQLEKNLGTVFVVLLITC 169
Query: 199 FSLVVVGGFLFHKFRKNQQSLEECFWEAWACLISSSTHLRQKTRIERVLGFFLAIWGILF 258
FS V++GG F KFRK+ SLE+C WEAWACL+++ THL QKTR ER++GF LAIWGI+F
Sbjct: 170 FSFVIIGGLFFFKFRKDT-SLEDCLWEAWACLVNADTHLEQKTRFERLIGFVLAIWGIVF 228
Query: 259 YSRLLSATTEQFRIQMHKVREGAQQQVIEDDHIIICGVNSHLPSILNQLNKFHESSIRLG 318
YSRLLS TEQFR M KVREGA QV+E DHIIICG+NSHLP IL QLN + + ++RLG
Sbjct: 229 YSRLLSTMTEQFRYHMKKVREGAHMQVLESDHIIICGINSHLPFILKQLNSYQQHAVRLG 288
Query: 319 TATARKQRILLLSDLPRKQIEKLGDSFAKDLNHIDVFTKSCSLSLTKSFERAAANKAKSI 378
T TARKQ +LL+SD PRK+++KL +++AKD + +D+ TKSCSL++TKSFERAAA A++I
Sbjct: 289 TTTARKQTLLLMSDTPRKEMDKLAEAYAKDFDQLDILTKSCSLNMTKSFERAAACMARAI 348
Query: 379 IILPAKNERYEVDTDAFLSLLALQSLPQIASIPTIVEASNSTTCDLLKSITGLNVQPVEM 438
IILP K +RYEVDTDAFLS+LAL+ + ++ SIPTIVE S+S DLLKSI+GL V+PVE
Sbjct: 349 IILPTKGDRYEVDTDAFLSVLALEPIQKMESIPTIVEVSSSNMYDLLKSISGLKVEPVEN 408
Query: 439 AASKLFVQCSRQKGLIKIYRHLLNYHKNVFNLFSFREVVGMKYVDVRRRIPDAVVCGIFR 498
+ SKLFVQCSRQK LIKIYRHLLNY KNVFNL SF + GMKY +R + VVCGI R
Sbjct: 409 STSKLFVQCSRQKDLIKIYRHLLNYSKNVFNLCSFPNLTGMKYRQLRLGFQEVVVCGILR 468
Query: 499 SGMMHFHPCEDEVLTEKDKLLLIAPVSWRRRAQSTFSNSPNGAQNSSHYSESTEGQRSSS 558
G ++FHP +DE L E DKLL IAP+ + F + +N + E +
Sbjct: 469 DGKVNFHPNDDEELMETDKLLFIAPL------KKDFLYTDMKTENMT----VDETDDTRK 518
Query: 559 MALEVNETRLNSIRKRPSKTLSKSNDYTLGPREHVLIVGWRPKVTDMIREYDNYLGPGSV 618
E ++RL I RPSK+LSK +D GP+E +L++GWR V +MI+E+D+YLGPGS
Sbjct: 519 QVYEEKKSRLEKIITRPSKSLSKGSDSFKGPKESILLLGWRGDVVNMIKEFDSYLGPGSS 578
Query: 619 LEILSETPIKERSSIVNPLMQKQLKNIKVNHQVGCPMNYDTLKEAIIKFK-KSRKHDQNV 677
LEILS+ P+++R + + ++KNI+V+H VG M+YDTLKE+I+ + K K ++++
Sbjct: 579 LEILSDVPLEDRRGVDQSIATGKIKNIQVSHSVGNHMDYDTLKESIMHMQNKYEKGEEDI 638
Query: 678 PFSVVVISDKDWLGGDTAQVDKQLAYTLLLAENICQKHDIKVEHLVSEIVDTGLGKQMSR 737
++VVISD+D L GD ++ DKQ AYTLLLAE IC K +KV +L SEIVDT LGKQ++R
Sbjct: 639 RLTIVVISDRDLLLGDPSRADKQSAYTLLLAETICNKLGVKVHNLASEIVDTKLGKQITR 698
Query: 738 IKPSLSFIGAEEVMSLVTAQVAGSSELNEVWKDILNAEGDEIYIKEIGFYMKEGEKISFS 797
+KPSL+FI AEEVMSLVTAQVA +SELNEVWKDIL+AEGDEIY+K+I YMKEGE SF+
Sbjct: 699 LKPSLTFIAAEEVMSLVTAQVAENSELNEVWKDILDAEGDEIYVKDIELYMKEGENPSFT 758
Query: 798 ELTERAILRREVAVGYVKGKKQYINPTNKLELLSFEMTDQLIVISEFEGEQPV 850
EL+ERA LRREVA+GY+KG K+ INP K E +S EM D LIVISE EG+Q +
Sbjct: 759 ELSERAWLRREVAIGYIKGGKKIINPVPKTEPVSLEMEDSLIVISELEGDQVI 811
>AT5G49960.1 | chr5:20324173-20327687 REVERSE LENGTH=825
Length = 824
Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 161/679 (23%), Positives = 307/679 (45%), Gaps = 103/679 (15%)
Query: 202 VVVGGFLFHKFRKNQQSLEECFWEAWACLISSSTHLRQKTRIERVLGFFLAIWGILFYSR 261
+V GG + + ++E W +W + S +H + R++ ++ G+L ++
Sbjct: 208 IVYGGLALYAV--SDCGVDEALWLSWTFVADSGSHADRVGVGARIVSVAISAGGMLIFAT 265
Query: 262 LLSATTEQFRIQMHKVREGAQQQVIEDDHIIICGVNSHLPSILNQLNKFHESSIRLGTAT 321
+L ++ + +R+G + +V+E +HI+I G + L S+L QL ++S +G
Sbjct: 266 MLGLISDAISKMVDSLRKG-KSEVLESNHILILGWSDKLGSLLKQLAIANKS---IGGGV 321
Query: 322 ARKQRILLLSDLPRKQIEKLGDSFAKDLNHIDVFTKSCSLSLTKSFERAAANKAKSIIIL 381
+++L++ ++++E F DL V +S S + ++ + + A++II+L
Sbjct: 322 -----VVVLAERDKEEMETDIAKFEFDLMGTSVICRSGSPLILADLKKVSVSNARAIIVL 376
Query: 382 PAKNERYEVDTDAFLSLLALQSLPQIASIPTIVEASNSTTCDLLKSITGLNVQPV--EMA 439
+ + D A +L+L + + +VE + L+K + G ++ V
Sbjct: 377 GSDENADQSDARALRVVLSLTGVKEGWKGHVVVEMCDLDNEPLVKLVGGERIETVVAHDV 436
Query: 440 ASKLFVQCSRQKGLIKIYRHLLNYHKNVFNLFSFREVVGMKYVDVRRRIPDAVVCG--IF 497
+L +QC+ Q GL +I+ +L + F + + ++ G + DV P+A+ CG +
Sbjct: 437 IGRLMIQCALQPGLAQIWEDILGFENAEFYIKKWPQLDGYCFEDVLISFPNAIPCGVKVA 496
Query: 498 RSGMMHFHPCEDEVLTEKDKLLLIAPVSWRRRAQSTFSNSPNGAQNSSHYSESTEGQRSS 557
G + +P +D VL E D++L+I A++ Y+ +
Sbjct: 497 ADGKIVLNPSDDYVLKEGDEILVI-------------------AEDDDTYAPGS------ 531
Query: 558 SMALEVNETRLNSIRKRPSKTLSKSNDYTLGPREHVLIVGWRPKVTDMIREYDNYLGPGS 617
+ E R+ K D P E +L GWR + DMI+ + L PGS
Sbjct: 532 -----LPEVRMCH--------FPKMQDPPKYP-EKILFCGWRRDIDDMIKVLEALLAPGS 577
Query: 618 VLEILSETPIKERSSIVNP--LMQKQLKNIKVNHQVGCPMNYDTLKEAIIKFKKSRKHDQ 675
L + +E P +ER + L +L NIK+ H+ G A+I R+H +
Sbjct: 578 ELWMFNEVPDQEREKKLTDAGLNISKLVNIKLVHRQG---------NAVI-----RRHLE 623
Query: 676 NVP---FSVVVISDKDWLGGDTAQVDKQLAYTLLLAENICQKH----DIKVEHL------ 722
++P F ++I + L D + TLLL +I K D K L
Sbjct: 624 SLPLETFDSILILAEQSLENSIVHSDSRSLATLLLIRDIQSKRLPYKDAKSSALRISGFP 683
Query: 723 -----------------VSEIVDTGLGKQMSRIKPSLSFIGAEEVMSLVTAQVAGSSELN 765
+SEI+D+ +S + S ++ + E++S+ A VA ++N
Sbjct: 684 NCCWIRKMQQASDKSIVISEILDSRTKNLVSVSRIS-DYVLSNELVSMALAMVAEDKQIN 742
Query: 766 EVWKDILNAEGDEIYIKEIGFYMKEGEKISFSELTERAILRREVAVGY-VKGKKQ-YINP 823
V K++ +G+E+ I+ FY+ + E++ F ++ RA R+E+ +GY + G +Q INP
Sbjct: 743 RVLKELFAEKGNELCIRPAEFYIYDQEEVCFYDIMRRARQRQEIIIGYRLAGMEQAVINP 802
Query: 824 TNKLELLSFEMTDQLIVIS 842
T+K +L + + D +VI+
Sbjct: 803 TDKSKLTKWSLDDVFVVIA 821
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.134 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 16,779,570
Number of extensions: 684679
Number of successful extensions: 1904
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 1896
Number of HSP's successfully gapped: 4
Length of query: 858
Length of database: 11,106,569
Length adjustment: 107
Effective length of query: 751
Effective length of database: 8,173,057
Effective search space: 6137965807
Effective search space used: 6137965807
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 116 (49.3 bits)