Os03g0843600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1012 family protein.
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Os03g0843600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1012 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 33.82 | 0.273 | 9.19 | 0.258 | 0.481 | 0.791 | -0.362 | -0.269 | 0.34 | 19.6 | 79 | 1332 | -- | -- |
| 33.81 | 0.271 | 9.19 | 0.236 | 0.498 | 0.761 | -0.357 | -- | 0.336 | 19.8 | 78.91 | 1271 | -- | -- |
| 34.16 | 0.272 | 9.19 | 0.262 | 0.491 | 0.783 | -- | -0.238 | 0.341 | 19.7 | 78.64 | 1304 | -- | -- |
| 34.17 | 0.272 | 9.19 | 0.245 | 0.509 | 0.754 | -- | -- | 0.335 | 19.9 | 78.87 | 1247 | -- | -- |
| 46.4 | 0.317 | 9.17 | 0.264 | -- | 0.861 | -- | -0.309 | 0.335 | -- | 78.11 | 1367 | -- | -- |
| 41.45 | 0.302 | 9.2 | 0.199 | 0.509 | -- | -0.318 | -- | 0.299 | 19.1 | -- | -- | -- | -- |
| 41.71 | 0.302 | 9.2 | 0.206 | 0.509 | -- | -- | -- | 0.298 | 19.1 | -- | -- | -- | -- |
| 46.48 | 0.318 | 9.18 | 0.239 | -- | 0.842 | -- | -- | 0.33 | -- | 78.02 | 1366 | -- | -- |
| 35.75 | 0.278 | 9.2 | -- | 0.511 | 0.73 | -- | -- | 0.312 | 19.9 | 79 | 1248 | -- | -- |
| 55.35 | 0.348 | 9.19 | 0.196 | -- | -- | -- | -- | 0.289 | -- | -- | -- | -- | -- |
| 42.83 | 0.306 | 9.2 | -- | 0.507 | -- | -- | -- | 0.275 | 19.1 | -- | -- | -- | -- |
| 47.97 | 0.323 | 9.18 | -- | -- | 0.817 | -- | -- | 0.302 | -- | 78.28 | 1367 | -- | -- |
| 56.37 | 0.35 | 9.19 | -- | -- | -- | -- | -- | 0.267 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.94 | humidity | 80 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 17 | 33.68 | humidity | 80 | 720 | < th | dose dependent | sin | 12 | NA |
| 20 | 33.72 | humidity | 80 | 1440 | < th | dose independent | rect. | 19 | 20 |
| 22 | 33.73 | humidity | 80 | 720 | < th | dose dependent | rect. | 19 | 4 |
| 32 | 33.80 | humidity | 80 | 1440 | > th | dose independent | rect. | 19 | 20 |
| 70 | 34.05 | humidity | 50 | 720 | > th | dose dependent | rect. | 17 | 8 |
| 72 | 34.06 | humidity | 80 | 1440 | > th | dose independent | rect. | 24 | 22 |
| 94 | 34.13 | humidity | 80 | 1440 | < th | dose independent | rect. | 23 | 22 |
| 115 | 34.20 | humidity | 80 | 1440 | < th | dose independent | rect. | 24 | 15 |
| 139 | 34.27 | humidity | 50 | 720 | > th | dose dependent | rect. | 16 | 15 |
| 158 | 34.33 | humidity | 80 | 720 | < th | dose independent | rect. | 19 | 2 |
| 159 | 34.33 | humidity | 50 | 720 | > th | dose dependent | sin | 13 | NA |
| 181 | 34.37 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 183 | 34.38 | humidity | 80 | 1440 | < th | dose independent | sin | 3 | NA |
| 192 | 34.39 | humidity | 80 | 1440 | > th | dose independent | no | NA | NA |
| 201 | 34.40 | humidity | 80 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 215 | 34.42 | humidity | 70 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 217 | 34.43 | humidity | 80 | 1440 | > th | dose independent | rect. | 23 | 16 |
| 242 | 34.46 | humidity | 80 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 251 | 34.48 | humidity | 80 | 1440 | < th | dose independent | no | NA | NA |
| 253 | 34.48 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 21 |
| 259 | 34.49 | humidity | 80 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 274 | 34.50 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 21 |
| 300 | 34.53 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 427 | 34.66 | humidity | 80 | 1440 | > th | dose independent | sin | 2 | NA |
| 450 | 34.68 | humidity | 80 | 1440 | < th | dose independent | rect. | 9 | 23 |
| 519 | 34.75 | humidity | 50 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 542 | 34.77 | humidity | 50 | 1440 | > th | dose dependent | no | NA | NA |
| 548 | 34.77 | humidity | 50 | 1440 | > th | dose dependent | rect. | 1 | 23 |
| 549 | 34.77 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 577 | 34.80 | humidity | 50 | 1440 | > th | dose dependent | rect. | 23 | 23 |
| 591 | 34.81 | humidity | 50 | 1440 | > th | dose dependent | rect. | 5 | 23 |
| 610 | 34.82 | humidity | 50 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 612 | 34.82 | humidity | 90 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 628 | 34.84 | humidity | 80 | 720 | > th | dose independent | rect. | 17 | 15 |
| 638 | 34.84 | humidity | 90 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 642 | 34.85 | humidity | 90 | 1440 | < th | dose dependent | no | NA | NA |
| 655 | 34.85 | humidity | 90 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 717 | 34.88 | humidity | 90 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 769 | 34.91 | humidity | 90 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 920 | 35.00 | humidity | 80 | 720 | < th | dose independent | rect. | 16 | 16 |