BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0762900 Os02g0762900|Os02g0762900
         (100 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os02g0762900  EF-Hand type domain containing protein              204   1e-53
Os06g0213300                                                      136   3e-33
Os07g0619200  Calcium-binding EF-hand domain containing protein    75   9e-15
Os03g0395200                                                       72   6e-14
Os09g0458800  Calcium-binding EF-hand domain containing protein    67   2e-12
Os09g0458900  Calcium-binding EF-hand domain containing protein    64   2e-11

>Os02g0762900 EF-Hand type domain containing protein
          Length = 100

 Score =  204 bits (519), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 100/100 (100%), Positives = 100/100 (100%)

Query: 1   MAFMRYHRALPQGETTVEEFRAWLSQFDANGDGRIGREELERALRSLNLWFAWWKAREAM 60
           MAFMRYHRALPQGETTVEEFRAWLSQFDANGDGRIGREELERALRSLNLWFAWWKAREAM
Sbjct: 1   MAFMRYHRALPQGETTVEEFRAWLSQFDANGDGRIGREELERALRSLNLWFAWWKAREAM 60

Query: 61  READANRNGVVDRDEMVRLYAFAQRHLHLKMNDLDDVASY 100
           READANRNGVVDRDEMVRLYAFAQRHLHLKMNDLDDVASY
Sbjct: 61  READANRNGVVDRDEMVRLYAFAQRHLHLKMNDLDDVASY 100



>Os06g0213300 
          Length = 99

 Score =  136 bits (343), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 72/101 (71%), Positives = 83/101 (82%), Gaps = 4/101 (3%)

Query: 1   MAFMRYHRALPQGETTVEEFRAWLSQFDANGDGRIGREELERALRSLNLWFAWWKAREAM 60
           MAF RY RALPQGE TVEEFRAWL QFDA+GDGRI R+EL+RALRSLNLWFAWWKAR  +
Sbjct: 1   MAFRRY-RALPQGEVTVEEFRAWLGQFDADGDGRISRDELQRALRSLNLWFAWWKARAGV 59

Query: 61  READANRNG-VVDRDEMVRLYAFAQRHLHLKMNDLDDVASY 100
           R ADANR+G V   DE+  L+AFAQRHL++K+ +L   ASY
Sbjct: 60  RAADANRDGAVAGDDEVATLFAFAQRHLNVKIAELG--ASY 98



>Os07g0619200 Calcium-binding EF-hand domain containing protein
          Length = 103

 Score = 75.5 bits (184), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 53/86 (61%), Gaps = 1/86 (1%)

Query: 8   RALPQG-ETTVEEFRAWLSQFDANGDGRIGREELERALRSLNLWFAWWKAREAMREADAN 66
           R +P   E TV++F+ WL QFD + DGRI R EL  A+R    WF+  KA  A+R AD +
Sbjct: 16  RGIPSSREMTVDDFKNWLKQFDTDNDGRISRGELREAIRRRGGWFSGLKAGRAVRHADRD 75

Query: 67  RNGVVDRDEMVRLYAFAQRHLHLKMN 92
            +G VD  E+  L AFAQ+ L +K+ 
Sbjct: 76  NSGFVDESEIENLVAFAQKTLGMKVT 101



>Os03g0395200 
          Length = 149

 Score = 72.4 bits (176), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 38/87 (43%), Positives = 53/87 (60%), Gaps = 5/87 (5%)

Query: 16  TVEEFRAWLSQFDANGDGRIGREELERALRSLNLWF-AWWKAREAMREADANRNGVVDRD 74
           T+EEF+ W  +F+ N DGRI   EL  A+RS    F AWWK+  A+ +AD +RNG +D  
Sbjct: 26  TLEEFKKWFMKFNTNNDGRISGVELREAIRSKGFGFSAWWKSIVALHQADKDRNGYIDEF 85

Query: 75  EMVRLYAFAQRHLHLKMND----LDDV 97
           E+  L  FAQ+ L +K+      LD+V
Sbjct: 86  EIENLVTFAQKVLGIKITTWQQHLDNV 112



>Os09g0458800 Calcium-binding EF-hand domain containing protein
          Length = 105

 Score = 67.4 bits (163), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 4/87 (4%)

Query: 6   YHRALPQGETTV-EEFRAWLSQFDANGDGRIGREELERALRSLNLWFAWWKAREAMREAD 64
           YH   P  ET V E+F+ W+ QFD +GDGRI R+EL RA+R++ + F   K R  M  AD
Sbjct: 19  YH---PFNETAVREKFKEWIRQFDTDGDGRISRDELRRAMRAVGVRFTGIKCRRGMSHAD 75

Query: 65  ANRNGVVDRDEMVRLYAFAQRHLHLKM 91
           A+ +G +D  E+  L  +  R L L +
Sbjct: 76  ADGDGYIDDSEIDGLIEYWGRRLGLGV 102



>Os09g0458900 Calcium-binding EF-hand domain containing protein
          Length = 98

 Score = 63.9 bits (154), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 58/91 (63%), Gaps = 1/91 (1%)

Query: 1  MAFMRYHRALPQGETTVEEFRAWLSQFDANGDGRIGREELERALRSLNLWFAWWKAREAM 60
          M      R+L  G+ TV+EF+ WL +FD + DGRI R+EL RA+R++   F  W++R+ +
Sbjct: 6  MTVATTTRSL-DGDMTVDEFKEWLRRFDVDRDGRISRDELRRAMRAIRARFTGWRSRQGI 64

Query: 61 READANRNGVVDRDEMVRLYAFAQRHLHLKM 91
            ADA+ +G +D  E+  L  +AQ+ L L++
Sbjct: 65 SYADADGDGYIDDGEVDGLIEYAQKSLGLRI 95



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.324    0.134    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,555,634
Number of extensions: 135198
Number of successful extensions: 858
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 856
Number of HSP's successfully gapped: 6
Length of query: 100
Length of database: 17,035,801
Length adjustment: 69
Effective length of query: 31
Effective length of database: 13,433,035
Effective search space: 416424085
Effective search space used: 416424085
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 149 (62.0 bits)