Os07g0619200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Calcium-binding EF-hand domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0619200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Calcium-binding EF-hand domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 70.83 | 0.395 | 13.4 | -1.25 | 0.8 | 0.544 | 0.993 | 2.61 | 0.504 | 20.3 | 69.98 | 5443 | -- | -- |
| 79.88 | 0.416 | 13.4 | -1.12 | 0.792 | 0.682 | 0.868 | -- | 0.513 | 20.2 | 68 | 5467 | -- | -- |
| 73.38 | 0.399 | 13.4 | -1.28 | 0.777 | 0.513 | -- | 2.48 | 0.511 | 20.1 | 69.01 | 5709 | -- | -- |
| 74.9 | 0.403 | 13.4 | -1.57 | 0.711 | 0.722 | -- | -- | 0.355 | 20 | 53.19 | 26523 | -- | -- |
| 106.41 | 0.48 | 13.4 | -1.25 | -- | 0.572 | -- | 2.38 | 0.492 | -- | 68.74 | 5782 | -- | -- |
| 87.51 | 0.439 | 13.4 | -1.11 | 0.777 | -- | 0.814 | -- | 0.476 | 20 | -- | -- | -- | -- |
| 89.45 | 0.443 | 13.4 | -1.13 | 0.778 | -- | -- | -- | 0.477 | 19.9 | -- | -- | -- | -- |
| 103.84 | 0.475 | 13.5 | -1.9 | -- | 1.34 | -- | -- | 0.169 | -- | 54.62 | 26114 | -- | -- |
| 108.18 | 0.484 | 13.4 | -- | 0.76 | -0.808 | -- | -- | 0.588 | 19.7 | 64 | 47520 | -- | -- |
| 122.41 | 0.517 | 13.4 | -1.14 | -- | -- | -- | -- | 0.466 | -- | -- | -- | -- | -- |
| 123.25 | 0.519 | 13.4 | -- | 0.786 | -- | -- | -- | 0.603 | 19.8 | -- | -- | -- | -- |
| 141.02 | 0.553 | 13.4 | -- | -- | -0.822 | -- | -- | 0.615 | -- | 65.62 | 47520 | -- | -- |
| 156.74 | 0.584 | 13.4 | -- | -- | -- | -- | -- | 0.593 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 57.99 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 4 |
| 2 | 58.06 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 3 | 58.17 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 8 | 59.36 | wind | 3 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 136 | 63.16 | wind | 1 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 145 | 63.30 | wind | 1 | 14400 | > th | dose independent | sin | 7 | NA |
| 194 | 63.79 | wind | 1 | 14400 | < th | dose independent | sin | 6 | NA |
| 245 | 64.15 | wind | 1 | 14400 | < th | dose dependent | sin | 6 | NA |
| 257 | 64.23 | wind | 3 | 14400 | < th | dose dependent | rect. | 24 | 2 |
| 288 | 64.43 | wind | 1 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 298 | 64.49 | wind | 1 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 303 | 64.51 | humidity | 60 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 360 | 64.71 | wind | 7 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 442 | 65.07 | wind | 1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 448 | 65.10 | humidity | 60 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 451 | 65.10 | wind | 1 | 14400 | > th | dose dependent | rect. | 22 | 10 |
| 526 | 65.39 | humidity | 80 | 14400 | > th | dose independent | rect. | 12 | 2 |
| 541 | 65.45 | radiation | 30 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 575 | 65.60 | temperature | 20 | 14400 | < th | dose independent | rect. | 20 | 2 |
| 639 | 65.78 | temperature | 20 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 669 | 65.84 | radiation | 30 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 682 | 65.89 | radiation | 40 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 694 | 65.93 | humidity | 60 | 14400 | > th | dose independent | rect. | 8 | 4 |
| 712 | 65.97 | humidity | 60 | 14400 | > th | dose independent | rect. | 24 | 12 |
| 716 | 65.98 | humidity | 60 | 14400 | > th | dose independent | rect. | 4 | 8 |
| 717 | 65.98 | humidity | 60 | 14400 | > th | dose independent | rect. | 2 | 10 |
| 726 | 66.00 | temperature | 25 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 735 | 66.04 | temperature | 25 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 737 | 66.05 | humidity | 80 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 740 | 66.07 | humidity | 60 | 14400 | < th | dose dependent | rect. | 10 | 6 |
| 746 | 66.09 | humidity | 70 | 14400 | < th | dose dependent | rect. | 7 | 4 |
| 804 | 66.18 | humidity | 60 | 14400 | < th | dose dependent | rect. | 18 | 22 |
| 808 | 66.21 | humidity | 60 | 14400 | < th | dose independent | sin | 8 | NA |
| 811 | 66.21 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 829 | 66.26 | humidity | 60 | 14400 | < th | dose dependent | sin | 2 | NA |
| 866 | 66.33 | humidity | 60 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 934 | 66.46 | temperature | 25 | 14400 | > th | dose independent | rect. | 10 | 1 |