Os09g0458800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Calcium-binding EF-hand domain containing protein.
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Os09g0458800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Calcium-binding EF-hand domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 544.82 | 1.1 | 8.56 | 0.0526 | 1.1 | -4.94 | -1.48 | -5.19 | 1.26 | 19.3 | 21.1 | 2954 | 19.2 | -- |
| 570.43 | 1.11 | 8.65 | -0.157 | 1.03 | -3.83 | -0.621 | -- | 1.23 | 18.5 | 20.9 | 1861 | 20.4 | -- |
| 549.41 | 1.09 | 8.56 | 0.102 | 1.11 | -4.89 | -- | -5.1 | 1.26 | 18.9 | 21 | 2959 | 19.4 | -- |
| 570.05 | 1.11 | 8.69 | -0.0767 | 0.966 | -3.69 | -- | -- | 1.2 | 18.4 | 21 | 1843 | 21.3 | -- |
| 611.23 | 1.15 | 8.55 | -0.0224 | -- | -4.89 | -- | -4.74 | 1.19 | -- | 21.02 | 3079 | 19.7 | -- |
| 797.55 | 1.32 | 8.53 | 1.32 | 1.11 | -- | -1.58 | -- | 1.99 | 19.7 | -- | -- | -- | -- |
| 803.87 | 1.33 | 8.53 | 1.36 | 1.12 | -- | -- | -- | 1.99 | 19.3 | -- | -- | -- | -- |
| 617.62 | 1.16 | 8.7 | -0.134 | -- | -3.67 | -- | -- | 1.13 | -- | 21 | 1843 | 21.8 | -- |
| 570.25 | 1.11 | 8.7 | -- | 0.969 | -3.65 | -- | -- | 1.21 | 18.4 | 21 | 1843 | 21.3 | -- |
| 871.06 | 1.38 | 8.5 | 1.34 | -- | -- | -- | -- | 1.97 | -- | -- | -- | -- | -- |
| 852.79 | 1.37 | 8.56 | -- | 1.11 | -- | -- | -- | 1.84 | 19.4 | -- | -- | -- | -- |
| 617.96 | 1.16 | 8.68 | -- | -- | -3.61 | -- | -- | 1.16 | -- | 20.96 | 1843 | 21.8 | -- |
| 918.66 | 1.41 | 8.54 | -- | -- | -- | -- | -- | 1.82 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 457.72 | wind | 1 | 43200 | < th | dose dependent | rect. | 5 | 6 |
| 5 | 465.65 | wind | 1 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 9 | 472.67 | wind | 1 | 43200 | < th | dose dependent | rect. | 6 | 3 |
| 10 | 473.22 | wind | 1 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 13 | 479.63 | wind | 1 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 15 | 481.74 | wind | 1 | 43200 | < th | dose dependent | sin | 6 | NA |
| 19 | 483.07 | wind | 1 | 43200 | < th | dose dependent | rect. | 23 | 14 |
| 23 | 484.44 | wind | 1 | 14400 | < th | dose dependent | rect. | 23 | 9 |
| 25 | 485.17 | wind | 1 | 43200 | < th | dose independent | rect. | 22 | 14 |
| 29 | 486.64 | wind | 1 | 14400 | < th | dose dependent | rect. | 1 | 7 |
| 43 | 489.82 | wind | 1 | 43200 | > th | dose independent | rect. | 22 | 12 |
| 47 | 490.58 | wind | 1 | 14400 | < th | dose independent | rect. | 23 | 9 |
| 51 | 491.91 | wind | 1 | 43200 | > th | dose independent | sin | 7 | NA |
| 59 | 493.50 | wind | 1 | 43200 | < th | dose independent | sin | 7 | NA |
| 64 | 494.03 | wind | 1 | 14400 | < th | dose dependent | rect. | 20 | 12 |
| 79 | 495.77 | wind | 1 | 14400 | < th | dose independent | rect. | 20 | 12 |
| 96 | 497.01 | wind | 1 | 43200 | > th | dose independent | rect. | 6 | 3 |
| 98 | 497.02 | wind | 1 | 14400 | < th | dose dependent | rect. | 16 | 16 |
| 103 | 497.53 | wind | 1 | 14400 | < th | dose dependent | rect. | 18 | 14 |
| 104 | 497.70 | wind | 1 | 14400 | > th | dose independent | rect. | 23 | 9 |
| 171 | 502.83 | wind | 1 | 43200 | > th | dose independent | rect. | 4 | 5 |
| 207 | 504.94 | wind | 1 | 43200 | < th | dose dependent | rect. | 16 | 21 |
| 245 | 506.93 | wind | 1 | 14400 | < th | dose independent | rect. | 3 | 5 |
| 264 | 507.65 | wind | 1 | 43200 | < th | dose independent | rect. | 4 | 10 |
| 315 | 509.38 | humidity | 80 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 364 | 510.91 | wind | 1 | 14400 | < th | dose dependent | rect. | 1 | 3 |
| 370 | 511.13 | wind | 1 | 14400 | > th | dose independent | rect. | 16 | 16 |
| 380 | 511.41 | wind | 1 | 14400 | < th | dose independent | rect. | 24 | 4 |
| 394 | 511.93 | wind | 1 | 14400 | < th | dose dependent | rect. | 1 | 21 |
| 398 | 512.02 | wind | 1 | 43200 | < th | dose dependent | rect. | 1 | 23 |
| 405 | 512.17 | wind | 1 | 43200 | > th | dose independent | rect. | 4 | 7 |
| 418 | 512.54 | wind | 3 | 14400 | < th | dose dependent | rect. | 23 | 3 |
| 451 | 513.26 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 18 |
| 525 | 515.10 | wind | 1 | 14400 | > th | dose independent | rect. | 24 | 4 |
| 582 | 516.17 | wind | 1 | 43200 | > th | dose independent | rect. | 4 | 10 |
| 592 | 516.41 | wind | 1 | 43200 | > th | dose independent | rect. | 12 | 21 |
| 664 | 517.55 | wind | 1 | 14400 | > th | dose independent | rect. | 20 | 21 |
| 713 | 518.27 | wind | 1 | 14400 | < th | dose dependent | no | NA | NA |
| 738 | 518.85 | wind | 1 | 14400 | > th | dose independent | rect. | 16 | 20 |
| 745 | 518.95 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 19 |
| 748 | 519.00 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 23 |
| 813 | 519.74 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 19 |
| 821 | 519.84 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 23 |
| 849 | 520.22 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 23 |
| 851 | 520.24 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 21 |
| 931 | 521.47 | wind | 1 | 14400 | > th | dose dependent | rect. | 6 | 2 |
| 939 | 521.66 | wind | 1 | 14400 | < th | dose dependent | rect. | 6 | 23 |
| 943 | 521.70 | wind | 1 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 959 | 521.97 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 963 | 522.04 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 969 | 522.21 | humidity | 90 | 43200 | < th | dose independent | rect. | 4 | 2 |