BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0736100 Os02g0736100|AK102381
(599 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0736100 Myosin II heavy chain-like family protein 920 0.0
Os06g0251700 Myosin II heavy chain-like family protein 734 0.0
Os12g0640900 Myosin II heavy chain-like family protein 614 e-176
Os03g0215700 Myosin II heavy chain-like family protein 260 2e-69
>Os02g0736100 Myosin II heavy chain-like family protein
Length = 599
Score = 920 bits (2378), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/575 (82%), Positives = 474/575 (82%)
Query: 25 VQPAGLDADELLTLMHGSDPVKVELNRLENEVRDKDRELGDAHAEIKALRLSERAREKAV 84
VQPAGLDADELLTLMHGSDPVKVELNRLENEVRDKDRELGDAHAEIKALRLSERAREKAV
Sbjct: 25 VQPAGLDADELLTLMHGSDPVKVELNRLENEVRDKDRELGDAHAEIKALRLSERAREKAV 84
Query: 85 EELTAXXXXXXXXXXXXXXXXXXXXXXXXXXXDEKKXXXXXXXXXXXTLRRVHAAQKDDD 144
EELTA DEKK TLRRVHAAQKDDD
Sbjct: 85 EELTAEYEKLDEKLKLTESLLESKNLELKKTNDEKKAAMAAQFAAEATLRRVHAAQKDDD 144
Query: 145 MPPIEAILAPLEAELKLARQEIAKLQDDNRALDRLTKQKEAALLEAERTVEIALAKAAMV 204
MPPIEAILAPLEAELKLARQEIAKLQDDNRALDRLTKQKEAALLEAERTVEIALAKAAMV
Sbjct: 145 MPPIEAILAPLEAELKLARQEIAKLQDDNRALDRLTKQKEAALLEAERTVEIALAKAAMV 204
Query: 205 DDMQNKNQELMKQIEICQEENKILDRLHRQKVAEVEKLSQTVREXXXXXXXXXXXXXXXR 264
DDMQNKNQELMKQIEICQEENKILDRLHRQKVAEVEKLSQTVRE R
Sbjct: 205 DDMQNKNQELMKQIEICQEENKILDRLHRQKVAEVEKLSQTVRELEEAVLAGGAAANAVR 264
Query: 265 DYQRKVQEMNEERKILDRELXXXXXXXXXXXXXXXXEWKDANDKVMPVKQWLEERRFLQG 324
DYQRKVQEMNEERKILDREL EWKDANDKVMPVKQWLEERRFLQG
Sbjct: 265 DYQRKVQEMNEERKILDRELARAKVTANRVAVVVANEWKDANDKVMPVKQWLEERRFLQG 324
Query: 325 EMQQLRDKLAIAERTARSEAQLKEKYQLRLKVLEDGLRGPPSGSSRPTEGKSIGNGPSRR 384
EMQQLRDKLAIAERTARSEAQLKEKYQLRLKVLEDGLRGPPSGSSRPTEGKSIGNGPSRR
Sbjct: 325 EMQQLRDKLAIAERTARSEAQLKEKYQLRLKVLEDGLRGPPSGSSRPTEGKSIGNGPSRR 384
Query: 385 LSLGGADNMSKISPNGMLAXXXXXXXXXXXXXXXXXLVIKHAKGTSRSFDGGTRSLDRGK 444
LSLGGADNMSKISPNGMLA LVIKHAKGTSRSFDGGTRSLDRGK
Sbjct: 385 LSLGGADNMSKISPNGMLARRSPSFNSRSSLSTSSSLVIKHAKGTSRSFDGGTRSLDRGK 444
Query: 445 VLGNGPHLLNRSTDAVRDCETTDDWKAANTEEKGSEATNSSSTDTVSGVLYDMLQKEVIS 504
VLGNGPHLLNRSTDAVRDCETTDDWKAANTEEKGSEATNSSSTDTVSGVLYDMLQKEVIS
Sbjct: 445 VLGNGPHLLNRSTDAVRDCETTDDWKAANTEEKGSEATNSSSTDTVSGVLYDMLQKEVIS 504
Query: 505 LRKACHEKDQSLKDKDDAIEMLAKKVDTLTKAMEVEAKKMXXXXXXXXXXXXXXXLDKDQ 564
LRKACHEKDQSLKDKDDAIEMLAKKVDTLTKAMEVEAKKM LDKDQ
Sbjct: 505 LRKACHEKDQSLKDKDDAIEMLAKKVDTLTKAMEVEAKKMRREVAAMEKEVAAMRLDKDQ 564
Query: 565 ENKAKRPGNFKGPGTTSQAPHGRNAPRGGLTRNLQ 599
ENKAKRPGNFKGPGTTSQAPHGRNAPRGGLTRNLQ
Sbjct: 565 ENKAKRPGNFKGPGTTSQAPHGRNAPRGGLTRNLQ 599
>Os06g0251700 Myosin II heavy chain-like family protein
Length = 608
Score = 734 bits (1894), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/584 (67%), Positives = 429/584 (73%), Gaps = 12/584 (2%)
Query: 28 AGLDADELLTLMHGSDPVKVELNRLENEVRDKDRELGDAHAEIKALRLSERAREKAVEEL 87
A LDADE + LMHGSDPV+VEL RLENE+RDK+RELG+A EI+ALRLSERAREKAVEEL
Sbjct: 25 ASLDADEFIALMHGSDPVRVELTRLENELRDKERELGEAQTEIRALRLSERAREKAVEEL 84
Query: 88 TAXXXXXXXXXXXXXXXXXXXXXXXXXXXDEKKXXXXXXXXXXXTLRRVHAAQKDDDMPP 147
T DEKK TLRRVHAAQKDDDMPP
Sbjct: 85 TDELEKMFEKLKLTESLLDSKNLEVKKINDEKKAAMAAQFAAEATLRRVHAAQKDDDMPP 144
Query: 148 IEAILAPLEAELKLARQEIAKLQDDNRALDRLTKQKEAALLEAERTVEIALAKAAMVDDM 207
IEAILAPLEAELKLARQEIAKLQDDNRALDRLTKQKEAALL+AERTVEIA+AKAAMVDD+
Sbjct: 145 IEAILAPLEAELKLARQEIAKLQDDNRALDRLTKQKEAALLDAERTVEIAMAKAAMVDDL 204
Query: 208 QNKNQELMKQIEICQEENKILDRLHRQKVAEVEKLSQTVREXXXXXXXXXXXXXXXRDYQ 267
QNKNQELMKQIEIC EENKILD+L RQKVAEV+KLS TV+E RDYQ
Sbjct: 205 QNKNQELMKQIEICHEENKILDKLQRQKVAEVKKLSLTVKELEEAVLRGGATANVVRDYQ 264
Query: 268 RKVQEMNEERKILDRELXXXXXXXXXXXXXXXXEWKDANDKVMPVKQWLEERRFLQGEMQ 327
R+VQE+N+++K L+ EL EWKD+NDKVMPVKQWLEERRFLQGEMQ
Sbjct: 265 RQVQEVNDQKKTLECELARAKVTANRVAVVVANEWKDSNDKVMPVKQWLEERRFLQGEMQ 324
Query: 328 QLRDKLAIAERTARSEAQLKEKYQLRLKVLEDGLRGPPSGSSR-PTEGKSIGNGPSRRLS 386
QLRDKLA+AERTARSEAQLKEKYQLRLKVLEDGLRGPPSGSSR PTEGKS NGPSRRLS
Sbjct: 325 QLRDKLAVAERTARSEAQLKEKYQLRLKVLEDGLRGPPSGSSRLPTEGKSFSNGPSRRLS 384
Query: 387 LGGADNMSKISPNGMLAXXXXXXXXXXXXXXXXXLVIKHAKGTSRSFDGGTRSLDRGKVL 446
LGGADNMSK+SPNG+LA LV+KHAKGTS+SFDGGTRSLDR K+
Sbjct: 385 LGGADNMSKLSPNGLLARRSPSFHSRSSLSSSSSLVLKHAKGTSKSFDGGTRSLDRSKIN 444
Query: 447 GNGPHLLNRSTDAVRDCETTDDWKA-----------ANTEEKGSEATNSSSTDTVSGVLY 495
GNG HLLNRSTDAVRDCET D WK +NT+E E N+ S + VSG LY
Sbjct: 445 GNGAHLLNRSTDAVRDCETNDSWKGNADEGTIENTNSNTDESNKETANNKSAEMVSGFLY 504
Query: 496 DMLQKEVISLRKACHEKDQSLKDKDDAIEMLAKKVDTLTKAMEVEAKKMXXXXXXXXXXX 555
DMLQKEVISLRKACHEKDQSLKDKDDAIEMLAKKVDTLTKAMEVEAKKM
Sbjct: 505 DMLQKEVISLRKACHEKDQSLKDKDDAIEMLAKKVDTLTKAMEVEAKKMRREVAAMEKEV 564
Query: 556 XXXXLDKDQENKAKRPGNFKGPGTTSQAPHGRNAPRGGLTRNLQ 599
+DK+QE KA+R G+ KG G++ R++ R GLTRN Q
Sbjct: 565 AAMRVDKEQEVKARRLGSSKGTGSSQVLSGSRSSSRSGLTRNYQ 608
>Os12g0640900 Myosin II heavy chain-like family protein
Length = 567
Score = 614 bits (1584), Expect = e-176, Method: Compositional matrix adjust.
Identities = 345/576 (59%), Positives = 396/576 (68%), Gaps = 29/576 (5%)
Query: 25 VQPAGLDADELLTLMHGSDPVKVELNRLENEVRDKDRELGDAHAEIKALRLSERAREKAV 84
++PA L+ ++ + L+HGSDPV+VEL RLENE++ K++ELG+A AEIKALRLSERAREKAV
Sbjct: 19 LKPA-LEVEDFINLLHGSDPVRVELTRLENELQYKEKELGEAQAEIKALRLSERAREKAV 77
Query: 85 EELTAXXXXXXXXXXXXXXXXXXXXXXXXXXXDEKKXXXXXXXXXXXTLRRVHAAQKDDD 144
E+LT DEKK TLRRVHAAQKDDD
Sbjct: 78 EDLTEELTKVDGKLKLTESLLESKNLEAKKINDEKKAALAAQFAAEATLRRVHAAQKDDD 137
Query: 145 MPPIEAILAPLEAELKLARQEIAKLQDDNRALDRLTKQKEAALLEAERTVEIALAKAAMV 204
MPPIEAILAPLEAELKLAR EIAKLQDDNRALDRLTK KEAALLEAERTV+IALAKA++V
Sbjct: 138 MPPIEAILAPLEAELKLARHEIAKLQDDNRALDRLTKSKEAALLEAERTVQIALAKASLV 197
Query: 205 DDMQNKNQELMKQIEICQEENKILDRLHRQKVAEVEKLSQTVREXXXXXXXXXXXXXXXR 264
DD+QNKNQELMKQIEICQEENKILDR+HRQKVAEVEKL+QTVRE R
Sbjct: 198 DDLQNKNQELMKQIEICQEENKILDRMHRQKVAEVEKLTQTVRELEEAVLAGGAAANAVR 257
Query: 265 DYQRKVQEMNEERKILDRELXXXXXXXXXXXXXXXXEWKDANDKVMPVKQWLEERRFLQG 324
DYQRKVQEMNEERK LDREL EWKD NDKVMPVKQWLEERR LQG
Sbjct: 258 DYQRKVQEMNEERKTLDRELARAKVSANRVAVVVANEWKDGNDKVMPVKQWLEERRILQG 317
Query: 325 EMQQLRDKLAIAERTARSEAQLKEKYQLRLKVLEDGLRGPPSGSSRPTEGKSIGNGPSRR 384
EMQQLRDKLAIAER ARSEAQLK+K+QLRLKVLE+GLR + ++ +RR
Sbjct: 318 EMQQLRDKLAIAERAARSEAQLKDKFQLRLKVLEEGLRMSTTRTN---------VSAARR 368
Query: 385 LSLGGADNMSKISPNGMLAXXXXXXXXXXXXXXXXXLVIKHAKGTSRSFDGGTRSLDR-- 442
S+GGAD++SK NG L+ LV HAKG S+SFDGG RSLDR
Sbjct: 369 QSIGGADSLSKT--NGFLSKRPSFQMRSSVSTTTTTLV-NHAKGASKSFDGGCRSLDRYK 425
Query: 443 GKVLGNGPHLLNRSTDAVRDCETTDDWKAANTEEKGSEATNSSSTDTVSGVLYDMLQKEV 502
G V G+G +N STD+ D E+ N++EK +E T+ + DTVSG+LYD LQKEV
Sbjct: 426 GHVNGSG---MNVSTDSSEDKESN------NSDEKANEFTSVETEDTVSGLLYDTLQKEV 476
Query: 503 ISLRKACHEKDQSLKDKDDAIEMLAKKVDTLTKAMEVEAKKMXXXXXXXXXXXXXXXLDK 562
I+LRKACHEKDQSLKDKDDA+EMLAKKVDTLTKAME E KK L+K
Sbjct: 477 IALRKACHEKDQSLKDKDDAVEMLAKKVDTLTKAMESEGKKRRMEVAAMEKEMAALRLEK 536
Query: 563 DQENKAKRPGNFKGPGTTSQAPHGRNAPRGGLTRNL 598
+Q+NKAKR G+ ++SQ P GR PR G RN+
Sbjct: 537 EQDNKAKRFGS-----SSSQLPPGRTLPRSGSARNM 567
>Os03g0215700 Myosin II heavy chain-like family protein
Length = 515
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 143/327 (43%), Positives = 207/327 (63%)
Query: 43 DPVKVELNRLENEVRDKDRELGDAHAEIKALRLSERAREKAVEELTAXXXXXXXXXXXXX 102
DPV ELNRLEN +R+KDRELG A++EIK L+++E ++KA+ ELT
Sbjct: 24 DPVVDELNRLENLLREKDRELGHAYSEIKGLKVTEALKDKAIAELTKELKKQDEKLSSLE 83
Query: 103 XXXXXXXXXXXXXXDEKKXXXXXXXXXXXTLRRVHAAQKDDDMPPIEAILAPLEAELKLA 162
+E+K TLRR+H++QKD+++ P +AI+APLE+++K
Sbjct: 84 KQLEQKNLDVKRLSNERKEALSAQFAAEATLRRIHSSQKDEEVVPFDAIIAPLESDIKAY 143
Query: 163 RQEIAKLQDDNRALDRLTKQKEAALLEAERTVEIALAKAAMVDDMQNKNQELMKQIEICQ 222
R EIA LQDD +AL+R K KEAAL+EA + AL +A +V+D+QN+N EL KQ+EI
Sbjct: 144 RHEIALLQDDKKALERHLKLKEAALVEAGNILRSALERALIVEDVQNQNIELKKQMEIYH 203
Query: 223 EENKILDRLHRQKVAEVEKLSQTVREXXXXXXXXXXXXXXXRDYQRKVQEMNEERKILDR 282
EENK+L++ +RQ+V ++E+L+ T+ E R YQ + ++NEE++ L+R
Sbjct: 204 EENKLLEKSNRQQVLDIERLTHTIAELEESILSTGDVANAVRFYQNQAAKLNEEKRTLER 263
Query: 283 ELXXXXXXXXXXXXXXXXEWKDANDKVMPVKQWLEERRFLQGEMQQLRDKLAIAERTARS 342
EL EWKD DK+MPVK+WLEERR LQGE+Q+LRDK+A+AE++A++
Sbjct: 264 ELARAKVYVNRVASTTANEWKDDADKLMPVKRWLEERRLLQGEIQRLRDKIAMAEKSAKA 323
Query: 343 EAQLKEKYQLRLKVLEDGLRGPPSGSS 369
EAQL +K + +LK LED +R S +S
Sbjct: 324 EAQLNDKLRRKLKALEDDMRNESSNTS 350
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.310 0.128 0.346
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,425,777
Number of extensions: 557487
Number of successful extensions: 1992
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 1966
Number of HSP's successfully gapped: 4
Length of query: 599
Length of database: 17,035,801
Length adjustment: 107
Effective length of query: 492
Effective length of database: 11,448,903
Effective search space: 5632860276
Effective search space used: 5632860276
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 159 (65.9 bits)