Os12g0640900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Myosin II heavy chain-like family protein.
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Os12g0640900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Myosin II heavy chain-like family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 49.68 | 0.331 | 8.22 | -1.3 | 0.869 | -0.884 | -0.0496 | 1.9 | 0.286 | 22.3 | 24.5 | 292 | -- | -- |
| 54.42 | 0.344 | 8.19 | -1.02 | 0.844 | -1.23 | 0.0136 | -- | 0.344 | 22.2 | 23.23 | 305 | -- | -- |
| 49.69 | 0.328 | 8.22 | -1.3 | 0.868 | -0.885 | -- | 1.9 | 0.286 | 22.3 | 24.5 | 292 | -- | -- |
| 54.2 | 0.343 | 8.18 | -1.01 | 0.878 | -1.16 | -- | -- | 0.359 | 22.3 | 23.55 | 293 | -- | -- |
| 79.36 | 0.415 | 8.22 | -1.42 | -- | -1.32 | -- | 1.77 | 0.188 | -- | 28.8 | 717 | -- | -- |
| 70.93 | 0.395 | 8.14 | -0.742 | 0.872 | -- | -0.0855 | -- | 0.54 | 21.8 | -- | -- | -- | -- |
| 70.95 | 0.394 | 8.14 | -0.739 | 0.872 | -- | -- | -- | 0.54 | 21.8 | -- | -- | -- | -- |
| 84.35 | 0.428 | 8.19 | -1.11 | -- | -1.39 | -- | -- | 0.223 | -- | 28.36 | 761 | -- | -- |
| 78.5 | 0.413 | 8.14 | -- | 0.889 | -0.704 | -- | -- | 0.528 | 22 | 23.62 | 192 | -- | -- |
| 116.3 | 0.504 | 8.12 | -0.73 | -- | -- | -- | -- | 0.539 | -- | -- | -- | -- | -- |
| 85.35 | 0.432 | 8.12 | -- | 0.87 | -- | -- | -- | 0.622 | 21.7 | -- | -- | -- | -- |
| 113.57 | 0.496 | 8.14 | -- | -- | -0.943 | -- | -- | 0.453 | -- | 28.7 | 722 | -- | -- |
| 130.37 | 0.533 | 8.1 | -- | -- | -- | -- | -- | 0.62 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 46.70 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 1 | 11 |
| 17 | 46.87 | humidity | 70.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 34 | 47.07 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 60 | 47.19 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 8 | 3 |
| 103 | 47.38 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 1 | 10 |
| 118 | 47.42 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 199 | 47.67 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 2 | 8 |
| 311 | 47.93 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 17 | 14 |
| 331 | 47.96 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 15 | 5 |
| 334 | 47.97 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 387 | 48.05 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 14 | 7 |
| 395 | 48.06 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 12 | 22 |
| 399 | 48.08 | humidity | 70.0 | 43200 | < th | dose independent | sin | 5 | NA |
| 406 | 48.09 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 2 | 12 |
| 429 | 48.12 | wind | 5.0 | 43200 | < th | dose independent | rect. | 16 | 4 |
| 446 | 48.14 | wind | 5.0 | 43200 | > th | dose independent | rect. | 15 | 5 |
| 460 | 48.17 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 16 | 1 |
| 486 | 48.19 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 1 | 16 |
| 498 | 48.20 | humidity | 70.0 | 43200 | > th | dose independent | sin | 4 | NA |
| 516 | 48.21 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 24 | 17 |
| 517 | 48.21 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 584 | 48.24 | humidity | 60.0 | 43200 | < th | dose dependent | no | NA | NA |
| 660 | 48.29 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 8 | 23 |
| 691 | 48.32 | humidity | 60.0 | 43200 | > th | dose independent | sin | 7 | NA |
| 756 | 48.37 | wind | 5.0 | 14400 | < th | dose independent | rect. | 10 | 7 |
| 874 | 48.45 | wind | 5.0 | 14400 | > th | dose independent | rect. | 10 | 7 |
| 941 | 48.50 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 979 | 48.52 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 20 | 17 |