BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0716500 Os02g0716500|AK065239
(388 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0716500 Similar to Delta-12 fatty acid desaturase (Fra... 805 0.0
Os07g0417200 Similar to Delta 12 oleic acid desaturase FAD2 590 e-169
Os07g0416900 Similar to Omega-6 fatty acid desaturase, endo... 582 e-166
Os12g0104400 Fatty acid acyl-CoA desaturase family protein 238 7e-63
Os07g0693800 Similar to Fatty acid desaturase (Fragment) 204 1e-52
Os03g0290300 Similar to W-3 fatty acid desaturase (Fragment) 155 5e-38
Os11g0104400 Similar to W-3 fatty acid desaturase (Fragment) 151 6e-37
Os07g0416700 114 1e-25
>Os02g0716500 Similar to Delta-12 fatty acid desaturase (Fragment)
Length = 388
Score = 805 bits (2080), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/388 (100%), Positives = 388/388 (100%)
Query: 1 MGAGGRMTEKEREEQQKLLGRAGNGAAVQRSPTDKPPFTLGQIKKAIPPHCFQRSVIKSF 60
MGAGGRMTEKEREEQQKLLGRAGNGAAVQRSPTDKPPFTLGQIKKAIPPHCFQRSVIKSF
Sbjct: 1 MGAGGRMTEKEREEQQKLLGRAGNGAAVQRSPTDKPPFTLGQIKKAIPPHCFQRSVIKSF 60
Query: 61 SYVVHDLVIVAALLYFALVMIPVLPSGMEFAAWPLYWIAQGCVLTGVWVIAHECGHHAFS 120
SYVVHDLVIVAALLYFALVMIPVLPSGMEFAAWPLYWIAQGCVLTGVWVIAHECGHHAFS
Sbjct: 61 SYVVHDLVIVAALLYFALVMIPVLPSGMEFAAWPLYWIAQGCVLTGVWVIAHECGHHAFS 120
Query: 121 DYSVLDDIVGLVLHSSLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSAMAWYTPYVY 180
DYSVLDDIVGLVLHSSLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSAMAWYTPYVY
Sbjct: 121 DYSVLDDIVGLVLHSSLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSAMAWYTPYVY 180
Query: 181 HNPIGRLVHIFVQLTLGWPLYLAFNVSGRPYPRFACHFDPYGPIYNDRERVQIFISDVGV 240
HNPIGRLVHIFVQLTLGWPLYLAFNVSGRPYPRFACHFDPYGPIYNDRERVQIFISDVGV
Sbjct: 181 HNPIGRLVHIFVQLTLGWPLYLAFNVSGRPYPRFACHFDPYGPIYNDRERVQIFISDVGV 240
Query: 241 VSAGLALFKLSSAFGFWWVVRVYGVPLLIVNAWLVLITYLQHTHPALPHYDSSEWDWLRG 300
VSAGLALFKLSSAFGFWWVVRVYGVPLLIVNAWLVLITYLQHTHPALPHYDSSEWDWLRG
Sbjct: 241 VSAGLALFKLSSAFGFWWVVRVYGVPLLIVNAWLVLITYLQHTHPALPHYDSSEWDWLRG 300
Query: 301 ALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIRPILGEYYQFDPTPVA 360
ALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIRPILGEYYQFDPTPVA
Sbjct: 301 ALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIRPILGEYYQFDPTPVA 360
Query: 361 KATWREAKECIYVEPEDNKGVFWYNNKF 388
KATWREAKECIYVEPEDNKGVFWYNNKF
Sbjct: 361 KATWREAKECIYVEPEDNKGVFWYNNKF 388
>Os07g0417200 Similar to Delta 12 oleic acid desaturase FAD2
Length = 382
Score = 590 bits (1521), Expect = e-169, Method: Compositional matrix adjust.
Identities = 272/382 (71%), Positives = 329/382 (86%), Gaps = 1/382 (0%)
Query: 8 TEKEREEQQKLLGRAGNGAAVQRSPTDKPPFTLGQIKKAIPPHCFQRSVIKSFSYVVHDL 67
T E ++Q+ LL R+G+ AA+QRSP DKPPFTLG IKKAIPPHCF RSVIKSFSY++HDL
Sbjct: 1 TVVEGKKQELLLRRSGSSAAMQRSPVDKPPFTLGDIKKAIPPHCFHRSVIKSFSYLLHDL 60
Query: 68 VIVAALLYFALVMIPVLPSGMEFAAWPLYWIAQGCVLTGVWVIAHECGHHAFSDYSVLDD 127
I A LLYFALV IP LPS + AWPLYW AQG VLTGVWVI HECGHHAFSDY +LD+
Sbjct: 61 AIAAGLLYFALVGIPALPSILRLVAWPLYWAAQGSVLTGVWVIGHECGHHAFSDYLLLDN 120
Query: 128 IVGLVLHSSLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSAMAWYTPYVYHNPIGRL 187
+VGLVLHS+LL P+FSWKYSHRRHH+NTGS+E+DEV+V K+KSA+ WYTPYV+ NP+GRL
Sbjct: 121 LVGLVLHSALLTPFFSWKYSHRRHHANTGSMEKDEVYVAKKKSALPWYTPYVFGNPVGRL 180
Query: 188 VHIFVQLTLGWPLYLAFNVSGRPYPRF-ACHFDPYGPIYNDRERVQIFISDVGVVSAGLA 246
V+I +QLTL WPLYLAFN+SG+PYPR CH+DPY P+++D+ERVQ+ +SD +++ LA
Sbjct: 181 VYIALQLTLAWPLYLAFNLSGQPYPRLVTCHYDPYSPLFSDQERVQVLVSDAAILAVLLA 240
Query: 247 LFKLSSAFGFWWVVRVYGVPLLIVNAWLVLITYLQHTHPALPHYDSSEWDWLRGALATVD 306
L +L++A+G WWVVRVYGVP++IV A VLITYL HTH ALPHYDSSEW+WLRG+LATVD
Sbjct: 241 LHRLTAAYGLWWVVRVYGVPVMIVGALFVLITYLHHTHRALPHYDSSEWEWLRGSLATVD 300
Query: 307 RDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIRPILGEYYQFDPTPVAKATWRE 366
RDYG+LN+V HN+TDTHV HHLF +MPHYHAMEAT+A RP+LGEYY+FD TP+ +ATWRE
Sbjct: 301 RDYGVLNRVLHNVTDTHVLHHLFPSMPHYHAMEATRAARPVLGEYYKFDRTPIIEATWRE 360
Query: 367 AKECIYVEPEDNKGVFWYNNKF 388
AKEC+YVEP + G++WYNNKF
Sbjct: 361 AKECMYVEPRERDGIYWYNNKF 382
>Os07g0416900 Similar to Omega-6 fatty acid desaturase, endoplasmic reticulum
isozyme 2 (EC 1.14.19.-)
Length = 390
Score = 582 bits (1499), Expect = e-166, Method: Compositional matrix adjust.
Identities = 277/390 (71%), Positives = 324/390 (83%), Gaps = 2/390 (0%)
Query: 1 MGAGGRMTEKEREEQQKLLGRAGNGAAVQRSPTDKPPFTLGQIKKAIPPHCFQRSVIKSF 60
MG R T + ++ + RAG+ AAV+RSP DKPPFTLG I+KAIPPHCF RSVIKSF
Sbjct: 1 MGTSSRPTTVKEGKKLEAPRRAGSHAAVKRSPVDKPPFTLGDIRKAIPPHCFHRSVIKSF 60
Query: 61 SYVVHDLVIVAALLYFALVMIPVLPSGMEFAAWPLYWIAQGCVLTGVWVIAHECGHHAFS 120
SY++HDL I A LLYFALV+IP LP + AWP YW AQGC L GVW+IAHECGHHAFS
Sbjct: 61 SYLLHDLAIAAGLLYFALVVIPALPGVLRLVAWPFYWAAQGCFLFGVWIIAHECGHHAFS 120
Query: 121 DYSVLDDIVGLVLHSSLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSAMAWYTPYVY 180
+++LDD +GLVLHS LL PYFSWKY+H+RHHSNT S ERDEVFVP+ KS + WY+PYVY
Sbjct: 121 GHALLDDTLGLVLHSWLLAPYFSWKYTHQRHHSNTSSQERDEVFVPRFKSDLPWYSPYVY 180
Query: 181 --HNPIGRLVHIFVQLTLGWPLYLAFNVSGRPYPRFACHFDPYGPIYNDRERVQIFISDV 238
+NP+ RL+ + VQLT+GWP+YL FN GR YPRFA HFDP GPIY RERV I ISD+
Sbjct: 181 KYNNPVARLLLLVVQLTVGWPMYLVFNTWGRQYPRFASHFDPSGPIYKGRERVFIAISDI 240
Query: 239 GVVSAGLALFKLSSAFGFWWVVRVYGVPLLIVNAWLVLITYLQHTHPALPHYDSSEWDWL 298
G+++ LAL++L+ +GFWWVVRVYGVPLL+VNAWLV++TYL HTH A+PHYDSSEWDWL
Sbjct: 241 GMLAVSLALYRLAEGYGFWWVVRVYGVPLLVVNAWLVVVTYLHHTHRAIPHYDSSEWDWL 300
Query: 299 RGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIRPILGEYYQFDPTP 358
RGALATVDRDY LN+VFHNITDTHV HHLF T+PHYHA+EATKAIRPILGEYYQFDPTP
Sbjct: 301 RGALATVDRDYSFLNRVFHNITDTHVVHHLFPTIPHYHAVEATKAIRPILGEYYQFDPTP 360
Query: 359 VAKATWREAKECIYVEPEDNKGVFWYNNKF 388
+ KA WREAKECIY++ ED+KGVFWY+NKF
Sbjct: 361 IVKAIWREAKECIYIQSEDHKGVFWYSNKF 390
>Os12g0104400 Fatty acid acyl-CoA desaturase family protein
Length = 385
Score = 238 bits (606), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 139/342 (40%), Positives = 197/342 (57%), Gaps = 20/342 (5%)
Query: 16 QKLLGRAGNGAAVQRSPTDKPPFTLGQIKKAIPPHCFQRSVIKSFSYVVHDLVIVAALLY 75
Q+ +A A + PPF +G ++ AIP HC++++ ++S SYV DL+IVAAL
Sbjct: 7 QEADCKASEDARLFFDAAKPPPFRIGDVRAAIPAHCWRKTPLRSLSYVARDLLIVAALFA 66
Query: 76 FALVMIPVLPSGMEFAAWPLYWIAQGCVLTGVWVIAHECGHHAFSDYSVLDDIVGLVLHS 135
A I V + +AAWPLYW AQG + ++V+ H+CGH +FSD ++L+++VG +LHS
Sbjct: 67 AAATRIDV---SVAWAAWPLYWAAQGTMFWALFVLGHDCGHGSFSDSAMLNNVVGHLLHS 123
Query: 136 SLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSAMAWYTPYVYHNPIGRLVHIFVQL- 194
+LVPY W+ SHR HH N G +E+DE + P T +Y R + L
Sbjct: 124 FILVPYHGWRISHRTHHQNHGHIEKDESWHP--------ITEKLYRKLETRTKKLRFTLP 175
Query: 195 --TLGWPLYLAFNVSGRPYPRFACHFDPYGPIYNDRERVQIFISDVGVVSAGLALFKLSS 252
L +P+YL + G+ HF P +++ +E+ + +S L L+
Sbjct: 176 FPLLAFPVYLWYRSPGKT----GSHFLPSSDLFSPKEKSDVIVSTTCWCIMISLLVALAC 231
Query: 253 AFGFWWVVRVYGVPLLIVNAWLVLITYL-QHTHPALPHYDSSEWDWLRGALATVDRDYGI 311
FG V+ +YGVP L+ WL L+TYL H H LP Y EW +LRG L TVDRDYG
Sbjct: 232 VFGSVPVLMLYGVPYLVFVMWLDLVTYLHHHGHNDLPWYRGEEWSYLRGGLTTVDRDYGW 291
Query: 312 LNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIRPILGEYYQ 353
+N + H+I THV HHLF +PHYH +EATKA RP+LG YY+
Sbjct: 292 INNIHHDI-GTHVIHHLFPQIPHYHLVEATKAARPVLGRYYR 332
>Os07g0693800 Similar to Fatty acid desaturase (Fragment)
Length = 413
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 124/326 (38%), Positives = 177/326 (54%), Gaps = 21/326 (6%)
Query: 31 SPTDKPPFTLGQIKKAIPPHCFQRSVIKSFSYVVHDLVIVAALLYFALVMIPVLPSGMEF 90
P PPF L I+ AIP HC+ + +S YV+ D+V+V AL A + L
Sbjct: 65 DPGAAPPFGLADIRAAIPKHCWVKDPWRSMGYVLRDVVVVFALAAAAARLHSCL------ 118
Query: 91 AAWPLYWIAQGCVLTGVWVIAHECGHHAFSDYSVLDDIVGLVLHSSLLVPYFSWKYSHRR 150
AWPLYW AQG + ++V+ H+CGH +FS+ S L+ ++G +LHSS+LVPY W+ SHR
Sbjct: 119 -AWPLYWAAQGTMFWALFVLGHDCGHGSFSNNSRLNSVMGHILHSSILVPYHGWRISHRT 177
Query: 151 HHSNTGSLERDEVFVPKQKSAMAWYTPYVYHNPIGRLVHIFVQL-TLGWPLYLAFNVSGR 209
HH N G +++DE + P + Y N R++ + L +P YL G+
Sbjct: 178 HHQNHGHVDKDESWHPLPERL------YRSLNRATRMLRFSIPFPMLAYPFYLWSRSPGK 231
Query: 210 PYPRFACHFDPYGPIYNDRERVQIFISDVGVVSAGLALFKLSSAFGFWWVVRVYGVPLLI 269
HF P ++ ER + S V+ L L+ G ++ +Y VP I
Sbjct: 232 S----GSHFHPSSDLFQPNERNDVLTSTACWVAMAALLAGLTFLMGPLLMLNLYFVPYWI 287
Query: 270 VNAWLVLITYLQH--THPALPHYDSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHH 327
WL +TYL H + LP Y EW +LRG L TVDRDYG +N + H+I THV HH
Sbjct: 288 FVMWLDFVTYLHHHGHNDKLPWYRGKEWSYLRGGLTTVDRDYGWINNIHHDI-GTHVIHH 346
Query: 328 LFSTMPHYHAMEATKAIRPILGEYYQ 353
LF +PHYH +EAT+A + ++G+YY+
Sbjct: 347 LFPQIPHYHLIEATEAAKGVMGKYYR 372
>Os03g0290300 Similar to W-3 fatty acid desaturase (Fragment)
Length = 276
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 92/237 (38%), Positives = 129/237 (54%), Gaps = 12/237 (5%)
Query: 119 FSDYSVLDDIVGLVLHSSLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSAMAWYTPY 178
FS + L+ +VG +LHSS+LVPY W+ SHR HH N G +E+DE + P + Y
Sbjct: 1 FSSNAKLNSVVGHILHSSILVPYHGWRISHRTHHQNHGHVEKDESWQPLSERL---YNSL 57
Query: 179 VYHNPIGRLVHIFVQLTLGWPLYLAFNVSGRPYPRFACHFDPYGPIYNDRERVQIFISDV 238
Y R F L +PLYL G+ HF+P ++ E+ + S
Sbjct: 58 DYMTKKLRFTMPFPM--LAFPLYLFARSPGKK----GSHFNPSSDLFQPNEKKDVITSTA 111
Query: 239 GVVSAGLALFKLSSAFGFWWVVRVYGVPLLIVNAWLVLITYLQH--THPALPHYDSSEWD 296
++ L L+ G ++++Y VP +I WL +TYL H LP Y EW
Sbjct: 112 SWLAMVGILAGLTFVMGPLKMLKLYAVPYVIFVMWLDFVTYLHHHGHEDKLPWYRGKEWS 171
Query: 297 WLRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIRPILGEYYQ 353
+LRG L T+DRDYG +N V H+I THV HHLF +PHYH +EAT+A +P+LG+YY+
Sbjct: 172 YLRGGLTTLDRDYGWINNVHHDI-GTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYK 227
>Os11g0104400 Similar to W-3 fatty acid desaturase (Fragment)
Length = 269
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 92/229 (40%), Positives = 126/229 (55%), Gaps = 14/229 (6%)
Query: 126 DDIVGLVLHSSLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSAMAWYTPYVYHNPIG 185
+++VG +LHS +LVPY W+ SHR HH N G +ERDE + P + + W
Sbjct: 1 NNVVGHLLHSFILVPYHGWRISHRTHHQNHGHIERDESWHPITEK-LYWQLE----TRTK 55
Query: 186 RLVHIFVQLTLGWPLYLAFNVSGRPYPRFACHFDPYGPIYNDRERVQIFISDVGVVSAGL 245
+L L +P Y + +G HF P +++ +E+ + +S
Sbjct: 56 KLRFTLPFTLLAFPWYRSPGKTG-------SHFLPSSDLFSPKEKSDVIVSTTCWCIMIS 108
Query: 246 ALFKLSSAFGFWWVVRVYGVPLLIVNAWLVLITYLQH-THPALPHYDSSEWDWLRGALAT 304
L L+ FG V+ +YGVP L+ WL L+TYL H H LP Y EW +LRG L T
Sbjct: 109 LLVALACVFGPVPVLMLYGVPYLVFVMWLDLVTYLHHHGHNDLPWYRGEEWSYLRGGLTT 168
Query: 305 VDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIRPILGEYYQ 353
VDRDYG +N + H+I THV HHLF +PHYH +EATKA RP+LG YY+
Sbjct: 169 VDRDYGWINNIHHDI-GTHVIHHLFPQIPHYHLVEATKAARPVLGRYYR 216
>Os07g0416700
Length = 400
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 113/235 (48%), Gaps = 37/235 (15%)
Query: 21 RAGNGAAVQRSPTDKPPFTLGQIKKAIPPHCFQRSVIKSFSYVVHDLVIVAALLYFALVM 80
RAG+ AAVQR F RSVIKSFSY++ D+ I A LL FALV
Sbjct: 195 RAGSSAAVQR---------------------FHRSVIKSFSYLLRDVAIAAGLLNFALVG 233
Query: 81 IPVLPSGMEFAAWPLYWIAQGCVLTGVWVIAHECGH--------HAFSDYSVLDDIVGLV 132
IPVLP+G+ L + L V + H H S +++ G +
Sbjct: 234 IPVLPAGVLRPPRRLAVLLGRAGLLPVRGVDHRARVRAPRAPRRHPRSGPALVAS--GTI 291
Query: 133 LHSSLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSAMAWYTPYVYHNPIGRLVHIFV 192
L + P + H TG+ V + + V P+ RL+ + +
Sbjct: 292 LLVEIQPPAAPLQ------HQLTGARRGVRPQVQVRSAVELPVRVQVQQRPVARLLLLGM 345
Query: 193 QLTLGWPLYLAFNVSGRPYPRFACHFDPYGPIYNDRERVQIFISDVGVVSAGLAL 247
QLT+GWP+YL FN GR YPRFA HFDP G IY RERV I ISD+G+++ LAL
Sbjct: 346 QLTVGWPMYLVFNTWGRWYPRFASHFDPSGAIYMRRERVFIAISDIGMLAVSLAL 400
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.325 0.140 0.465
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,782,254
Number of extensions: 648498
Number of successful extensions: 1856
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 1838
Number of HSP's successfully gapped: 8
Length of query: 388
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 285
Effective length of database: 11,657,759
Effective search space: 3322461315
Effective search space used: 3322461315
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 157 (65.1 bits)