BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0617300 Os02g0617300|AK067382
(755 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0617300 Armadillo-like helical domain containing protein 1393 0.0
Os04g0507500 Armadillo-like helical domain containing protein 984 0.0
Os02g0816300 Armadillo-like helical domain containing protein 380 e-105
AK110208 85 2e-16
>Os02g0617300 Armadillo-like helical domain containing protein
Length = 755
Score = 1393 bits (3606), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 689/755 (91%), Positives = 689/755 (91%)
Query: 1 MEAALEAARAKDTKQRLAGVXXXXXXXXXXXXXXXTSAEVTSLVDACMDLTKDGNFRXXX 60
MEAALEAARAKDTKQRLAGV TSAEVTSLVDACMDLTKDGNFR
Sbjct: 1 MEAALEAARAKDTKQRLAGVERLHEALEAAARRGLTSAEVTSLVDACMDLTKDGNFRVAQ 60
Query: 61 XXXXXXXXXXXXXXDHFKIHLNALVPAAVERLGDGKQPVRDAARQLLVTLMEVSSPTIIV 120
DHFKIHLNALVPAAVERLGDGKQPVRDAARQLLVTLMEVSSPTIIV
Sbjct: 61 GGLQALSAAAVLAGDHFKIHLNALVPAAVERLGDGKQPVRDAARQLLVTLMEVSSPTIIV 120
Query: 121 ERAGSYAWTHKSWRVREEFVRTVATAVGLFASTELPLQRVLLSPVLQLLNDLNQSVRDAA 180
ERAGSYAWTHKSWRVREEFVRTVATAVGLFASTELPLQRVLLSPVLQLLNDLNQSVRDAA
Sbjct: 121 ERAGSYAWTHKSWRVREEFVRTVATAVGLFASTELPLQRVLLSPVLQLLNDLNQSVRDAA 180
Query: 181 ISCIEEMYRNMGSQFHEELQRHNLPSYMLKDINSRLDKIEPKARSSDGARMQYKVIERSV 240
ISCIEEMYRNMGSQFHEELQRHNLPSYMLKDINSRLDKIEPKARSSDGARMQYKVIERSV
Sbjct: 181 ISCIEEMYRNMGSQFHEELQRHNLPSYMLKDINSRLDKIEPKARSSDGARMQYKVIERSV 240
Query: 241 SANAKRGSPRKKSSTRESTLFGGDSDITEKPVEPIRVHSEKELLREMEKIASALDPEKDW 300
SANAKRGSPRKKSSTRESTLFGGDSDITEKPVEPIRVHSEKELLREMEKIASALDPEKDW
Sbjct: 241 SANAKRGSPRKKSSTRESTLFGGDSDITEKPVEPIRVHSEKELLREMEKIASALDPEKDW 300
Query: 301 SIRIAAMQRIEALVYGGAIDYPSFLTLLKQLVPPLSAQLSDRRSSIVKQACHLLNMLSKE 360
SIRIAAMQRIEALVYGGAIDYPSFLTLLKQLVPPLSAQLSDRRSSIVKQACHLLNMLSKE
Sbjct: 301 SIRIAAMQRIEALVYGGAIDYPSFLTLLKQLVPPLSAQLSDRRSSIVKQACHLLNMLSKE 360
Query: 361 LLGDFEACAEIFIPVLFKLVVITVLVIAESADNCIKTILRNCKVSRILPLIADTAKNDRS 420
LLGDFEACAEIFIPVLFKLVVITVLVIAESADNCIKTILRNCKVSRILPLIADTAKNDRS
Sbjct: 361 LLGDFEACAEIFIPVLFKLVVITVLVIAESADNCIKTILRNCKVSRILPLIADTAKNDRS 420
Query: 421 AILRARCSEYAILILEYWADAPEIQRASDIYEDLIKCCVADAMSEVRATARSCYRMFTKT 480
AILRARCSEYAILILEYWADAPEIQRASDIYEDLIKCCVADAMSEVRATARSCYRMFTKT
Sbjct: 421 AILRARCSEYAILILEYWADAPEIQRASDIYEDLIKCCVADAMSEVRATARSCYRMFTKT 480
Query: 481 WPERSRRLFMSFDPAVQRIINDEDGGLQKRYPSPSLREKGVQLSHASSHASGTHLAGYST 540
WPERSRRLFMSFDPAVQRIINDEDGGLQKRYPSPSLREKGVQLSHASSHASGTHLAGYST
Sbjct: 481 WPERSRRLFMSFDPAVQRIINDEDGGLQKRYPSPSLREKGVQLSHASSHASGTHLAGYST 540
Query: 541 SAIVAMDKSAAIXXXXXXXXXXXXXXXKKIGRTAERSIESVLSSSKQKVSAIESLLKGVS 600
SAIVAMDKSAAI KKIGRTAERSIESVLSSSKQKVSAIESLLKGVS
Sbjct: 541 SAIVAMDKSAAISSESSLSSRSLLSQSKKIGRTAERSIESVLSSSKQKVSAIESLLKGVS 600
Query: 601 GRQNFSAMRSTSLDLGVDPPSSRDPPIPLAATASDHLSLQNSILLDSSLPSINNTRNGGS 660
GRQNFSAMRSTSLDLGVDPPSSRDPPIPLAATASDHLSLQNSILLDSSLPSINNTRNGGS
Sbjct: 601 GRQNFSAMRSTSLDLGVDPPSSRDPPIPLAATASDHLSLQNSILLDSSLPSINNTRNGGS 660
Query: 661 RLVDTVNPHVANKERXXXXXXXXXXXXXXXXXXXPYARSSSGRSPYGSTMEESNDTWSTR 720
RLVDTVNPHVANKER PYARSSSGRSPYGSTMEESNDTWSTR
Sbjct: 661 RLVDTVNPHVANKERSRSPYLSSLSSESISGSSLPYARSSSGRSPYGSTMEESNDTWSTR 720
Query: 721 RMPQMQMDRHYLDMTYRDASHRKAFKKLCRILKRS 755
RMPQMQMDRHYLDMTYRDASHRKAFKKLCRILKRS
Sbjct: 721 RMPQMQMDRHYLDMTYRDASHRKAFKKLCRILKRS 755
>Os04g0507500 Armadillo-like helical domain containing protein
Length = 626
Score = 984 bits (2543), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/622 (78%), Positives = 528/622 (84%), Gaps = 5/622 (0%)
Query: 1 MEAALEAARAKDTKQRLAGVXXXXXXX-XXXXXXXXTSAEVTSLVDACMDLTKDGNFRXX 59
MEAALEAARAKDTK+RLAGV T+ EVT+LVD CMDL +D NFR
Sbjct: 1 MEAALEAARAKDTKERLAGVERLHEALDAAARQRGLTAGEVTALVDTCMDLIRDANFRVA 60
Query: 60 XXXXXXXXXXXXXXXDHFKIHLNALVPAAVERLGDGKQPVRDAARQLLVTLMEVSSPTII 119
DHFKIHLNALVPAAVERLGDGKQPVR+AARQLL+TLMEVSSPTII
Sbjct: 61 QGGLQALSAAAVVAGDHFKIHLNALVPAAVERLGDGKQPVREAARQLLITLMEVSSPTII 120
Query: 120 VERAGSYAWTHKSWRVREEFVRTVATAVGLFASTELPLQRVLLSPVLQLLNDLNQSVRDA 179
VERAGSYAWTHKSWRVREEFVRTVATAVGLFASTELPLQRVLLSPVLQL+ND NQSVRDA
Sbjct: 121 VERAGSYAWTHKSWRVREEFVRTVATAVGLFASTELPLQRVLLSPVLQLMNDSNQSVRDA 180
Query: 180 AISCIEEMYRNMGSQFHEELQRHNLPSYMLKDINSRLDKIEPKARSSDGARMQYKVIE-R 238
AI CIEEMY +MGSQFHEELQRHNLP YML++INSRL++IEPK +SDG MQYK +E R
Sbjct: 181 AIYCIEEMYTHMGSQFHEELQRHNLPPYMLREINSRLERIEPKVPTSDGNIMQYKAVESR 240
Query: 239 SVSANAKRGSPRKKSSTRESTLFGGDSDITEKPVEPIRVHSEKELLREMEKIASALDPEK 298
SVS N KRGSPR KS+ RESTLFGGD+DITEKPVEP+RVHSEKELLRE EKIA+ L PEK
Sbjct: 241 SVSVNPKRGSPRTKSTPRESTLFGGDTDITEKPVEPVRVHSEKELLREFEKIAATLVPEK 300
Query: 299 DWSIRIAAMQRIEALVYGGAIDYPSFLTLLKQLVPPLSAQLSDRRSSIVKQACHLLNMLS 358
DWS+RIAAMQRIEALVYGGAIDYPSFL LLKQLVPPLS QLSDRRSSIVKQACHLLN+LS
Sbjct: 301 DWSVRIAAMQRIEALVYGGAIDYPSFLMLLKQLVPPLSTQLSDRRSSIVKQACHLLNVLS 360
Query: 359 KELLGDFEACAEIFIPVLFKLVVITVLVIAESADNCIKTILRNCKVSRILPLIADTAKND 418
KELLGDFE CAE+FIP+LFKLVVITVLVIAESAD CIKTILRNCK+SRILP IADTAKND
Sbjct: 361 KELLGDFEPCAELFIPMLFKLVVITVLVIAESADTCIKTILRNCKISRILPRIADTAKND 420
Query: 419 RSAILRARCSEYAILILEYWADAPEIQRASDIYEDLIKCCVADAMSEVRATARSCYRMFT 478
RSA+LRARC EYA+LILEYWADAPEIQR++D+YEDLIKCCVADAMSEVRATARSCYR+F
Sbjct: 421 RSAVLRARCCEYALLILEYWADAPEIQRSADLYEDLIKCCVADAMSEVRATARSCYRLFA 480
Query: 479 KTWPERSRRLFMSFDPAVQRIINDEDGGLQKRYPSPSLREKGVQLSHASSHASGTHLAGY 538
KTWPERSRRLFMSFDPA+QR INDEDGG+ KRY SPSLRE+ VQ S + SHASGT GY
Sbjct: 481 KTWPERSRRLFMSFDPAIQRTINDEDGGVHKRYASPSLRERVVQPSRSLSHASGTSALGY 540
Query: 539 STSAIVAMDKSAAIXXXXXXXXXXX-XXXXKKIGRTAERSIESVLSSSKQKVSAIESLLK 597
TSAIVAMDK+AAI K +GR++ERS+ESVL+SSK+KVSAIESLLK
Sbjct: 541 GTSAIVAMDKTAAISSDSSFSSNTLRLSQSKTVGRSSERSLESVLNSSKEKVSAIESLLK 600
Query: 598 GV--SGRQNFSAMRSTSLDLGV 617
GV S RQN SA RSTSLDLG+
Sbjct: 601 GVSISDRQNISATRSTSLDLGI 622
>Os02g0816300 Armadillo-like helical domain containing protein
Length = 1172
Score = 380 bits (976), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/324 (56%), Positives = 239/324 (73%), Gaps = 1/324 (0%)
Query: 209 LKDINSRLDKIEPKARSSDGARMQYKVIE-RSVSANAKRGSPRKKSSTRESTLFGGDSDI 267
+K++N+R+ E SD + I+ N + SP+ K TR+++L GD DI
Sbjct: 1 MKEMNARMGNGEKTPCISDVQDNRCMTIQIEPTDTNQAKKSPKVKIVTRDASLLAGDGDI 60
Query: 268 TEKPVEPIRVHSEKELLREMEKIASALDPEKDWSIRIAAMQRIEALVYGGAIDYPSFLTL 327
T K + PI+V SEK+L RE+E++AS L P+ +W+IRI AMQR+E LV GGA DY +F L
Sbjct: 61 TRKSLGPIKVFSEKDLSREIERVASTLHPDNEWAIRITAMQRVEGLVLGGAADYSAFPML 120
Query: 328 LKQLVPPLSAQLSDRRSSIVKQACHLLNMLSKELLGDFEACAEIFIPVLFKLVVITVLVI 387
LKQLV PL Q+ DRRSS+VKQACHLLN LSKELL DFE CAE+ IPVL K VVIT+ VI
Sbjct: 121 LKQLVTPLITQILDRRSSVVKQACHLLNFLSKELLRDFEPCAELLIPVLLKNVVITIHVI 180
Query: 388 AESADNCIKTILRNCKVSRILPLIADTAKNDRSAILRARCSEYAILILEYWADAPEIQRA 447
AES+DNCIK +LRNCKV+RILP I + AKND+SA+LRARC EYAIL+LE W D PEIQR+
Sbjct: 181 AESSDNCIKEMLRNCKVARILPKIIEFAKNDKSAVLRARCCEYAILMLELWVDTPEIQRS 240
Query: 448 SDIYEDLIKCCVADAMSEVRATARSCYRMFTKTWPERSRRLFMSFDPAVQRIINDEDGGL 507
D+YE+ IKCC+ DA SEVR++AR+CYRMF++ WPERS +LF SF+ + Q++INDED
Sbjct: 241 VDLYEEFIKCCIEDATSEVRSSARACYRMFSRIWPERSHQLFSSFESSRQKMINDEDAET 300
Query: 508 QKRYPSPSLREKGVQLSHASSHAS 531
Q+R+ SP R K +Q +S +++
Sbjct: 301 QQRHLSPVERVKLMQPQSSSCNST 324
>AK110208
Length = 914
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 98/206 (47%), Gaps = 3/206 (1%)
Query: 310 IEALVYGGAIDYPSFLTLLKQLVPPLSAQLSDRRSSIVKQACHLLNMLSKELLGDFEACA 369
I+A+ GGA F+ L+K+ P++ L R+ + A LLN ++ L FE
Sbjct: 50 IQAITRGGATKLADFVALIKEAAGPINGALLSERTKLSGTAADLLNSIAPRLGERFEPLV 109
Query: 370 EIFIPVLFKLVVITVLVIAESADNCIKTILRNCKVSRILPLIADTAKNDRSAILRARCSE 429
+F+P L ++ T V + A+ + I+++C+ ++PL+ + A D+ LRA +
Sbjct: 110 GVFVPTLLQICARTNKVAVKRAEKSLHFIVKHCRPVGVVPLLRE-AVRDKGQGLRAVAAG 168
Query: 430 YAILILEYWADAPEIQRASDIYEDLIKCCVADAMSEVRATARSCYRMFTKTWPERSRRLF 489
+ +LE +R +D+ E I+ D+ +EVR ++ + + WPER
Sbjct: 169 TLVAVLECTDRDRLARRVADV-EAAIRSGATDSNAEVRQISKRLFEQYVAVWPERVEAFT 227
Query: 490 MSFDPAVQRIIN-DEDGGLQKRYPSP 514
P ++R + + G L P+P
Sbjct: 228 KPMTPTIRRYLALPKTGALVVDVPTP 253
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.130 0.366
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 21,736,244
Number of extensions: 822514
Number of successful extensions: 2783
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 2775
Number of HSP's successfully gapped: 4
Length of query: 755
Length of database: 17,035,801
Length adjustment: 108
Effective length of query: 647
Effective length of database: 11,396,689
Effective search space: 7373657783
Effective search space used: 7373657783
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 160 (66.2 bits)