Os02g0816300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Armadillo-like helical domain containing protein.
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Os02g0816300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Armadillo-like helical domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 164.78 | 0.603 | 8.15 | -1.25 | 0.033 | -1.22 | -1.11 | -0.239 | -0.398 | 12.6 | 20.5 | 391 | -- | -- |
| 164.75 | 0.598 | 8.16 | -1.29 | 0.0758 | -1.21 | -1.16 | -- | -0.415 | 12.7 | 20.57 | 436 | -- | -- |
| 168.55 | 0.605 | 8.15 | -1.25 | 0.187 | -1.2 | -- | -0.39 | -0.376 | 16.8 | 20.5 | 436 | -- | -- |
| 168.79 | 0.605 | 8.17 | -1.33 | 0.176 | -1.17 | -- | -- | -0.409 | 17.1 | 20.5 | 431 | -- | -- |
| 169.99 | 0.607 | 8.15 | -1.3 | -- | -1.24 | -- | -0.325 | -0.396 | -- | 20.5 | 432 | -- | -- |
| 212.26 | 0.683 | 8.1 | -0.927 | 0.23 | -- | -0.966 | -- | -0.153 | 15 | -- | -- | -- | -- |
| 212.91 | 0.683 | 8.11 | -0.948 | 0.324 | -- | -- | -- | -0.157 | 17.7 | -- | -- | -- | -- |
| 170.29 | 0.608 | 8.16 | -1.35 | -- | -1.21 | -- | -- | -0.413 | -- | 20.4 | 390 | -- | -- |
| 210.85 | 0.676 | 8.12 | -- | 0.242 | -0.834 | -- | -- | -0.193 | 18.1 | 20.56 | 313 | -- | -- |
| 218.34 | 0.69 | 8.11 | -0.958 | -- | -- | -- | -- | -0.165 | -- | -- | -- | -- | -- |
| 236.6 | 0.72 | 8.09 | -- | 0.339 | -- | -- | -- | -0.0512 | 17.5 | -- | -- | -- | -- |
| 213.59 | 0.681 | 8.12 | -- | -- | -0.877 | -- | -- | -0.207 | -- | 20.6 | 313 | -- | -- |
| 242.57 | 0.727 | 8.08 | -- | -- | -- | -- | -- | -0.0582 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 155.29 | temperature | 20 | 270 | < th | dose independent | sin | 6 | NA |
| 4 | 157.02 | temperature | 20 | 270 | < th | dose independent | rect. | 23 | 12 |
| 7 | 157.90 | temperature | 20 | 270 | < th | dose independent | rect. | 23 | 16 |
| 12 | 158.05 | temperature | 20 | 270 | > th | dose independent | rect. | 23 | 14 |
| 13 | 158.21 | temperature | 20 | 270 | > th | dose independent | sin | 5 | NA |
| 20 | 158.76 | temperature | 25 | 270 | < th | dose dependent | sin | 5 | NA |
| 71 | 162.17 | temperature | 25 | 270 | < th | dose dependent | rect. | 23 | 20 |
| 77 | 162.41 | temperature | 25 | 270 | < th | dose dependent | rect. | 3 | 13 |
| 85 | 162.52 | temperature | 25 | 270 | < th | dose dependent | rect. | 1 | 16 |
| 104 | 162.93 | temperature | 25 | 270 | < th | dose dependent | rect. | 3 | 8 |
| 112 | 163.11 | temperature | 20 | 270 | < th | dose dependent | rect. | 24 | 9 |
| 237 | 165.78 | temperature | 20 | 720 | < th | dose independent | rect. | 20 | 10 |
| 252 | 166.01 | temperature | 20 | 720 | < th | dose independent | rect. | 21 | 8 |
| 262 | 166.10 | temperature | 15 | 270 | > th | dose dependent | sin | 6 | NA |
| 275 | 166.37 | temperature | 20 | 720 | > th | dose independent | rect. | 7 | 22 |
| 304 | 166.71 | temperature | 15 | 270 | > th | dose dependent | rect. | 24 | 12 |
| 393 | 167.73 | temperature | 20 | 270 | > th | dose independent | rect. | 22 | 23 |
| 440 | 168.03 | temperature | 20 | 270 | > th | dose independent | rect. | 20 | 23 |
| 557 | 168.89 | temperature | 20 | 270 | < th | dose independent | no | NA | NA |
| 561 | 168.90 | temperature | 25 | 720 | < th | dose dependent | sin | 10 | NA |
| 579 | 169.06 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 7 |
| 582 | 169.07 | temperature | 20 | 270 | > th | dose independent | no | NA | NA |
| 593 | 169.18 | temperature | 20 | 720 | > th | dose independent | rect. | 16 | 13 |
| 594 | 169.20 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 23 |
| 602 | 169.28 | temperature | 20 | 720 | < th | dose independent | rect. | 23 | 2 |
| 665 | 169.71 | temperature | 20 | 270 | > th | dose independent | rect. | 16 | 23 |
| 682 | 169.86 | temperature | 20 | 720 | < th | dose independent | rect. | 7 | 23 |
| 803 | 170.66 | temperature | 20 | 720 | > th | dose independent | rect. | 10 | 23 |
| 863 | 170.96 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |