BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0504800 Os02g0504800|AK069683
(322 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0504800 Similar to Delta-9 stearoyl-acyl carrier prote... 607 e-174
Os04g0379900 Similar to Acyl-[acyl-carrier-protein] desatur... 354 5e-98
Os01g0919900 Similar to Acyl-[acyl-carrier-protein] desatur... 350 8e-97
Os01g0880800 Similar to Acyl-[acyl-carrier-protein] desatur... 308 3e-84
Os08g0200100 Fatty acid desaturase, type 2 family protein 241 5e-64
Os08g0199400 Similar to Stearoyl-acyl carrier protein desat... 233 1e-61
Os03g0423300 Similar to Stearoyl-acyl carrier protein desat... 217 8e-57
Os03g0741000 153 2e-37
Os06g0503800 125 6e-29
>Os02g0504800 Similar to Delta-9 stearoyl-acyl carrier protein desaturase (EC
1.14.99.6) (Fragment)
Length = 322
Score = 607 bits (1566), Expect = e-174, Method: Compositional matrix adjust.
Identities = 299/322 (92%), Positives = 299/322 (92%)
Query: 1 MSLTGCLPPRPPCSMRRRTSGGGASVSPVVAMASTAGVGGIGNPTPRGKKPFAPWREVPP 60
MSLTGCLPPRPPCSMRRRTSGGGASVSPVVAMASTAGVGGIGNPTPRGKKPFAPWREVPP
Sbjct: 1 MSLTGCLPPRPPCSMRRRTSGGGASVSPVVAMASTAGVGGIGNPTPRGKKPFAPWREVPP 60
Query: 61 QVTHTLPPEKKEVFDSLEGWAADTILPYLKPVEESWQPQDHLPDPRSPSFGDEVAALRER 120
QVTHTLPPEKKEVFDSLEGWAADTILPYLKPVEESWQPQDHLPDPRSPSFGDEVAALRER
Sbjct: 61 QVTHTLPPEKKEVFDSLEGWAADTILPYLKPVEESWQPQDHLPDPRSPSFGDEVAALRER 120
Query: 121 AAGLPDDHLVCLVGDMVTEEALPTYQTMLNTMDGGVRDETGAGGSAWAVWTRAWAAEENR 180
AAGLPDDHLVCLVGDMVTEEALPTYQTMLNTMDGGVRDETGAGGSAWAVWTRAWAAEENR
Sbjct: 121 AAGLPDDHLVCLVGDMVTEEALPTYQTMLNTMDGGVRDETGAGGSAWAVWTRAWAAEENR 180
Query: 181 HGDLMNKYLYLTGRVDMRQVEKTIQYLIGSGMDPRTENDPYMGFIYTTFQERATSISHGN 240
HGDLMNKYLYLTGRVDMRQVEKTIQYLIGSGMDPRTENDPYMGFIYTTFQERATSISHGN
Sbjct: 181 HGDLMNKYLYLTGRVDMRQVEKTIQYLIGSGMDPRTENDPYMGFIYTTFQERATSISHGN 240
Query: 241 TARHAGRHGDAALARVCGTVARWGVPGLAAGLSGEGRRAQDFVCSLGPXXXXXXXXXXXX 300
TARHAGRHGDAALARVCGTVARWGVPGLAAGLSGEGRRAQDFVCSLGP
Sbjct: 241 TARHAGRHGDAALARVCGTVARWGVPGLAAGLSGEGRRAQDFVCSLGPRFRRMEERAQEA 300
Query: 301 XXXXXXXXXXXFSWIHGRQVQL 322
FSWIHGRQVQL
Sbjct: 301 AKRAPPAAAAPFSWIHGRQVQL 322
>Os04g0379900 Similar to Acyl-[acyl-carrier-protein] desaturase, chloroplast
precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
Length = 390
Score = 354 bits (908), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 170/246 (69%), Positives = 199/246 (80%), Gaps = 11/246 (4%)
Query: 16 RRRTSGGGASVSPVVAMASTAGVGGIGNPTPRGKKPFAPWREVPPQVTHTLPPEKKEVFD 75
+RR++G +SPVVAMAST N KKP+ P REV QV H+LPP+K+E+FD
Sbjct: 19 QRRSNG----MSPVVAMASTI------NRVKTAKKPYTPPREVHLQVKHSLPPQKREIFD 68
Query: 76 SLEGWAADTILPYLKPVEESWQPQDHLPDPRSPSFGDEVAALRERAAGLPDDHLVCLVGD 135
SL+ WA + +L LKPVE+SWQPQD LPDP S F DEV LRERA +PDD+ VCLVGD
Sbjct: 69 SLQPWAKENLLNLLKPVEKSWQPQDFLPDPSSDGFYDEVKELRERAKEIPDDYFVCLVGD 128
Query: 136 MVTEEALPTYQTMLNTMDGGVRDETGAGGSAWAVWTRAWAAEENRHGDLMNKYLYLTGRV 195
MVTEEALPTYQTMLNT+DG VRDETGA + WAVWTRAW AEENRHGDL+NKY+YLTGRV
Sbjct: 129 MVTEEALPTYQTMLNTLDG-VRDETGASPTTWAVWTRAWTAEENRHGDLLNKYMYLTGRV 187
Query: 196 DMRQVEKTIQYLIGSGMDPRTENDPYMGFIYTTFQERATSISHGNTARHAGRHGDAALAR 255
DM+Q+EKTIQYLIGSGMDP TEN+PY+GF+YT+FQERAT ISHGNTARHA +GD LA+
Sbjct: 188 DMKQIEKTIQYLIGSGMDPGTENNPYLGFLYTSFQERATFISHGNTARHAKEYGDLKLAQ 247
Query: 256 VCGTVA 261
+CGT+A
Sbjct: 248 ICGTIA 253
>Os01g0919900 Similar to Acyl-[acyl-carrier-protein] desaturase, chloroplast
precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
(Delta(9) stearoyl-acyl carrier protein desaturase)
Length = 400
Score = 350 bits (898), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 168/233 (72%), Positives = 190/233 (81%), Gaps = 6/233 (2%)
Query: 29 VVAMASTAGVGGIGNPTPRGKKPFAPWREVPPQVTHTLPPEKKEVFDSLEGWAADTILPY 88
V A+AS A + N KKPFAP REV QVTH++PP+K E+F SL+ WA D IL +
Sbjct: 37 VYAVASGAVSTKVEN-----KKPFAPPREVHVQVTHSMPPQKIEIFKSLDDWARDNILSH 91
Query: 89 LKPVEESWQPQDHLPDPRSPSFGDEVAALRERAAGLPDDHLVCLVGDMVTEEALPTYQTM 148
LKPVE+ WQPQD LPDP S F DEV LRERA +PDD+ VCLVGDM+TEEALPTYQTM
Sbjct: 92 LKPVEKCWQPQDFLPDPASDGFHDEVKELRERAKEIPDDYFVCLVGDMITEEALPTYQTM 151
Query: 149 LNTMDGGVRDETGAGGSAWAVWTRAWAAEENRHGDLMNKYLYLTGRVDMRQVEKTIQYLI 208
LNT+DG VRDETGA +AWAVWTRAW AEENRHGDL+NKYLYLTGRVDMRQ+EKTIQYLI
Sbjct: 152 LNTLDG-VRDETGASPTAWAVWTRAWTAEENRHGDLLNKYLYLTGRVDMRQIEKTIQYLI 210
Query: 209 GSGMDPRTENDPYMGFIYTTFQERATSISHGNTARHAGRHGDAALARVCGTVA 261
GSGMDPRTEN+PY+GFIYT+FQERAT ISHGNTARHA GD LA++CG +A
Sbjct: 211 GSGMDPRTENNPYLGFIYTSFQERATFISHGNTARHAKDFGDLKLAQICGIIA 263
>Os01g0880800 Similar to Acyl-[acyl-carrier-protein] desaturase, chloroplast
precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
Length = 381
Score = 308 bits (790), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 143/201 (71%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 61 QVTHTLPPEKKEVFDSLEGWAADTILPYLKPVEESWQPQDHLPDPRSPSFGDEVAALRER 120
+VTH++PPEK EVF SLEGWA ++LP LKPVEE WQP D LPD S F +V LR R
Sbjct: 42 RVTHSMPPEKAEVFRSLEGWARSSLLPLLKPVEECWQPTDFLPDSSSEMFEHQVHELRAR 101
Query: 121 AAGLPDDHLVCLVGDMVTEEALPTYQTMLNTMDGGVRDETGAGGSAWAVWTRAWAAEENR 180
AAGLPD++ V LVGDM+TEEALPTYQTM+NT+DG VRDETGA WAVWTR W AEENR
Sbjct: 102 AAGLPDEYFVVLVGDMITEEALPTYQTMINTLDG-VRDETGASACPWAVWTRTWTAEENR 160
Query: 181 HGDLMNKYLYLTGRVDMRQVEKTIQYLIGSGMDPRTENDPYMGFIYTTFQERATSISHGN 240
HGD++ KY+YL+GRVDMR VEKT+QYLIGSGMDP TEN+PY+GF+YT+FQERAT++SHGN
Sbjct: 161 HGDILGKYMYLSGRVDMRMVEKTVQYLIGSGMDPGTENNPYLGFVYTSFQERATAVSHGN 220
Query: 241 TARHAGRHGDAALARVCGTVA 261
TAR A HGD LAR CGT+A
Sbjct: 221 TARLARAHGDDVLARTCGTIA 241
>Os08g0200100 Fatty acid desaturase, type 2 family protein
Length = 404
Score = 241 bits (615), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 117/203 (57%), Positives = 142/203 (69%), Gaps = 4/203 (1%)
Query: 62 VTHTLPPEKKEVFDSLEGWAADTILPYLKPVEESWQPQDHLPDPRS---PSFGDEVAALR 118
V L P + EV + +E W +LP LKP EE+WQP D +PD + F LR
Sbjct: 58 VRRCLAPARLEVLEQMEPWVEAHVLPLLKPAEEAWQPADLVPDAAALGADGFHAACVELR 117
Query: 119 ERAAGLPDDHLVCLVGDMVTEEALPTYQTMLNTMDGGVRDETGAGGSAWAVWTRAWAAEE 178
RAAG+PD HLVCLVG+MVTEEALPTYQ+M N + RD TGA +AWA W R W+AEE
Sbjct: 118 GRAAGVPDAHLVCLVGNMVTEEALPTYQSMANRFESA-RDVTGADATAWARWIRGWSAEE 176
Query: 179 NRHGDLMNKYLYLTGRVDMRQVEKTIQYLIGSGMDPRTENDPYMGFIYTTFQERATSISH 238
NRHGD++N+Y+YL+GR+DMRQVE+T+ LIGSGM PY GFIY FQERAT+ISH
Sbjct: 177 NRHGDVLNRYMYLSGRLDMRQVERTVHRLIGSGMAMHAPASPYHGFIYVAFQERATAISH 236
Query: 239 GNTARHAGRHGDAALARVCGTVA 261
GNTAR+ HGD ALAR+CG +A
Sbjct: 237 GNTARNVRAHGDDALARICGAIA 259
>Os08g0199400 Similar to Stearoyl-acyl carrier protein desaturse (EC 1.14.99.6)
(Fragment)
Length = 419
Score = 233 bits (594), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 120/211 (56%), Positives = 144/211 (68%), Gaps = 6/211 (2%)
Query: 56 REVPPQVTHTLPPEKKEVFDSLEGWAADTILPYLKPVEESWQPQDHLPDPR---SPSFGD 112
RE ++ L PEK EV +E W + +LP LKPVE +WQP D LPDP F
Sbjct: 65 REEDEEMRSYLSPEKLEVLTQMEPWVEEHVLPLLKPVEAAWQPSDLLPDPAVLGGEGFHA 124
Query: 113 EVAALRERAAGLPDDHLVCLVGDMVTEEALPTYQTMLNTMDGGVRDETGAGGSAWAVWTR 172
A LRERAAG+PD LVCLV +MVTEEALPTYQ+ LN + V D TGA +AWA W R
Sbjct: 125 ACAELRERAAGVPDLLLVCLVANMVTEEALPTYQSSLNRVRA-VGDLTGADATAWARWIR 183
Query: 173 AWAAEENRHGDLMNKYLYLTGRVDMRQVEKTIQYLIGSGMDPRTENDPYMGFIYTTFQER 232
W+AEENRHGD++N+Y+YL+GR DM +VE+ + LI SGM PY F+YT FQER
Sbjct: 184 GWSAEENRHGDVLNRYMYLSGRFDMAEVERAVHRLIRSGMAVDPPCSPYHAFVYTAFQER 243
Query: 233 ATSISHGNTARHAGR--HGDAALARVCGTVA 261
AT+++HGNTAR G HGDAALARVCGTVA
Sbjct: 244 ATAVAHGNTARLVGARGHGDAALARVCGTVA 274
>Os03g0423300 Similar to Stearoyl-acyl carrier protein desaturse (EC 1.14.99.6)
(Fragment)
Length = 418
Score = 217 bits (553), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 110/199 (55%), Positives = 136/199 (68%), Gaps = 7/199 (3%)
Query: 69 EKKEVFDSLEGWAADTILPYLKPVEESWQPQDHLP------DPRSPSFGDEVAALRERAA 122
E+ E+ SL W + +LP L PV+ +WQP D LP +F + VA LR AA
Sbjct: 76 EQVEIARSLNAWVEENMLPLLTPVDSAWQPHDFLPCSAAGGGEALAAFTEGVAELRAGAA 135
Query: 123 GLPDDHLVCLVGDMVTEEALPTYQTMLNTMDGGVRDETGAGGSAWAVWTRAWAAEENRHG 182
G+PD+ LVCLVG+MVTEEALPTYQ+M N +G + D TG WA W R W AEENRHG
Sbjct: 136 GVPDEVLVCLVGNMVTEEALPTYQSMGNRAEG-LADGTGVSPLPWARWLRGWTAEENRHG 194
Query: 183 DLMNKYLYLTGRVDMRQVEKTIQYLIGSGMDPRTENDPYMGFIYTTFQERATSISHGNTA 242
DL+N+YLYL+GRVDMRQVE T+ L+ +GM+ PY G IY FQERAT ISHG+TA
Sbjct: 195 DLLNRYLYLSGRVDMRQVEATVHRLLRNGMEMLAPASPYHGLIYGAFQERATFISHGHTA 254
Query: 243 RHAGRHGDAALARVCGTVA 261
R AG+HGD ALA++CG +A
Sbjct: 255 RLAGQHGDRALAKICGVIA 273
>Os03g0741000
Length = 192
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 99/150 (66%), Gaps = 15/150 (10%)
Query: 77 LEGWAADTILPYLKPVEESWQPQDHLPDPRS---PSFGDEVAALRERAA----------- 122
+E W +L LKP +E+WQP+D +PD + F LRE AA
Sbjct: 1 MEPWVEQHVLLLLKPAKEAWQPEDMVPDAAALGADGFHAACLELRECAARRALSSGSALR 60
Query: 123 GLPDDHLVCLVGDMVTEEALPTYQTMLNTMDGGVRDETGAGGSAWAVWTRAWAAEENRHG 182
G+PD HLVCLVG+MVTEEALPTYQ+M+N + RD TGA G+AWA W W+AEEN H
Sbjct: 61 GVPDAHLVCLVGNMVTEEALPTYQSMVNRFESA-RDVTGADGTAWARWICRWSAEENHHD 119
Query: 183 DLMNKYLYLTGRVDMRQVEKTIQYLIGSGM 212
D++N+Y+YL+GR+DMRQVE+T+ LI SGM
Sbjct: 120 DVLNRYMYLSGRLDMRQVERTVHRLISSGM 149
>Os06g0503800
Length = 158
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 82/126 (65%), Gaps = 11/126 (8%)
Query: 136 MVTEEALPTYQTMLNTMDGGVRDETGAGGSAWAVWTRAWAAEENRHGDLMNKYLYLTGRV 195
MV EEALPTYQ+M N + RD TGA AWA W W+A+ENRHGD++N+Y+YL+GR+
Sbjct: 1 MVMEEALPTYQSMANRFESA-RDVTGADRMAWARWICRWSAKENRHGDVLNRYMYLSGRL 59
Query: 196 DMRQVEKTIQYLIGSGMDPRTENDPYMGFIYTTFQERATSISHGNTARHAG----RHGDA 251
DMRQVE+T+ LI SGM PY GF Y FQERAT+ + RHA RH +A
Sbjct: 60 DMRQVERTVHRLISSGMAMHAPVSPYHGFSYVVFQERATAAT-----RHATSAPMRH-EA 113
Query: 252 ALARVC 257
A RV
Sbjct: 114 AYTRVV 119
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.135 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,605,191
Number of extensions: 675652
Number of successful extensions: 2729
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 2715
Number of HSP's successfully gapped: 9
Length of query: 322
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 221
Effective length of database: 11,762,187
Effective search space: 2599443327
Effective search space used: 2599443327
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 156 (64.7 bits)