BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0469300 Os02g0469300|AK069003
(803 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0469300 ATP-binding region, ATPase-like domain contain... 1546 0.0
Os10g0181700 ATP-binding region, ATPase-like domain contain... 400 e-111
Os01g0549200 Conserved hypothetical protein 152 1e-36
Os06g0622000 ATP-binding region, ATPase-like domain contain... 100 7e-21
Os04g0311100 Hypothetical protein 88 3e-17
>Os02g0469300 ATP-binding region, ATPase-like domain containing protein
Length = 803
Score = 1546 bits (4003), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 746/780 (95%), Positives = 746/780 (95%)
Query: 24 VIDVSSSETDSDPDPGFGGAGKRPRRVVATAGSGREAEKRARILAAAVPPGFLDXXXXXX 83
VIDVSSSETDSDPDPGFGGAGKRPRRVVATAGSGREAEKRARILAAAVPPGFLD
Sbjct: 24 VIDVSSSETDSDPDPGFGGAGKRPRRVVATAGSGREAEKRARILAAAVPPGFLDPLPRPS 83
Query: 84 XXXXXXXXXXXXXXVTRQFWNAGDYDGKPDLLGGDPSLRSDSGMDHIRVHPRFLHSNATS 143
VTRQFWNAGDYDGKPDLLGGDPSLRSDSGMDHIRVHPRFLHSNATS
Sbjct: 84 APPPPPPPPRGRRRVTRQFWNAGDYDGKPDLLGGDPSLRSDSGMDHIRVHPRFLHSNATS 143
Query: 144 HKWALGAFAELLDNSLDEVANGATYVNIDMLENKKDGTRMVSVEDDGGGMDPDKMWHCMS 203
HKWALGAFAELLDNSLDEVANGATYVNIDMLENKKDGTRMVSVEDDGGGMDPDKMWHCMS
Sbjct: 144 HKWALGAFAELLDNSLDEVANGATYVNIDMLENKKDGTRMVSVEDDGGGMDPDKMWHCMS 203
Query: 204 LGYSAKSKVKDTIGQYGNGFKTSTMRLGADVLVLSRSCGNGGRRRTQSIGMLSYTFLRET 263
LGYSAKSKVKDTIGQYGNGFKTSTMRLGADVLVLSRSCGNGGRRRTQSIGMLSYTFLRET
Sbjct: 204 LGYSAKSKVKDTIGQYGNGFKTSTMRLGADVLVLSRSCGNGGRRRTQSIGMLSYTFLRET 263
Query: 264 RKDDIIVPMIDYEKGQQYWKRMMRTTSIDWQTSLATIIEWSPYSSEAELLQEFSSIKEQG 323
RKDDIIVPMIDYEKGQQYWKRMMRTTSIDWQTSLATIIEWSPYSSEAELLQEFSSIKEQG
Sbjct: 264 RKDDIIVPMIDYEKGQQYWKRMMRTTSIDWQTSLATIIEWSPYSSEAELLQEFSSIKEQG 323
Query: 324 TRIIIYNLWENEQGELELDFDTDVNDIQIRGGNRDQKNIQLAKQFPNSRHFFTYRHSLQS 383
TRIIIYNLWENEQGELELDFDTDVNDIQIRGGNRDQKNIQLAKQFPNSRHFFTYRHSLQS
Sbjct: 324 TRIIIYNLWENEQGELELDFDTDVNDIQIRGGNRDQKNIQLAKQFPNSRHFFTYRHSLQS 383
Query: 384 YASILYLRVPSVFQMILRGKEIEHHNIIGDMMMKNHVIYKPVMTDGFPRDIDMMTDVTIG 443
YASILYLRVPSVFQMILRGKEIEHHNIIGDMMMKNHVIYKPVMTDGFPRDIDMMTDVTIG
Sbjct: 384 YASILYLRVPSVFQMILRGKEIEHHNIIGDMMMKNHVIYKPVMTDGFPRDIDMMTDVTIG 443
Query: 444 FVKDAKHHIPIQGFNVYHKNRLIKPFWRVWALPGIQGRGVIGVLEVNFVEPAHDKQDFER 503
FVKDAKHHIPIQGFNVYHKNRLIKPFWRVWALPGIQGRGVIGVLEVNFVEPAHDKQDFER
Sbjct: 444 FVKDAKHHIPIQGFNVYHKNRLIKPFWRVWALPGIQGRGVIGVLEVNFVEPAHDKQDFER 503
Query: 504 TNSLARLEARLNLMQKKYWSDNCHRIGYGGNSANRKSGREYKGPTSDQSPEGCRSSNYLQ 563
TNSLARLEARLNLMQKKYWSDNCHRIGYGGNSANRKSGREYKGPTSDQSPEGCRSSNYLQ
Sbjct: 504 TNSLARLEARLNLMQKKYWSDNCHRIGYGGNSANRKSGREYKGPTSDQSPEGCRSSNYLQ 563
Query: 564 RKRXXXXXXXXXXXXXXKTGITSLNTSKISLPESRFSLRTTAQQTVEKTKRTLRYTRPLL 623
RKR KTGITSLNTSKISLPESRFSLRTTAQQTVEKTKRTLRYTRPLL
Sbjct: 564 RKRSFGSPYSGSSNNNSKTGITSLNTSKISLPESRFSLRTTAQQTVEKTKRTLRYTRPLL 623
Query: 624 HGLSHTSNDSDAQTSGTPSRSTSHILKTPEKSCHNENTLPLIPSSEAIRSEGTTRYQSEE 683
HGLSHTSNDSDAQTSGTPSRSTSHILKTPEKSCHNENTLPLIPSSEAIRSEGTTRYQSEE
Sbjct: 624 HGLSHTSNDSDAQTSGTPSRSTSHILKTPEKSCHNENTLPLIPSSEAIRSEGTTRYQSEE 683
Query: 684 RNVTNNGDGQTVDNPETVIKLLTDENSSLKESIMKMEESLSRELHIERDKNKSLIERLEN 743
RNVTNNGDGQTVDNPETVIKLLTDENSSLKESIMKMEESLSRELHIERDKNKSLIERLEN
Sbjct: 684 RNVTNNGDGQTVDNPETVIKLLTDENSSLKESIMKMEESLSRELHIERDKNKSLIERLEN 743
Query: 744 VQKQLGTANKEQEALVDIFTEERARRDQEVENQRTKLKEASSTIQNLLDQLNAARSCRKN 803
VQKQLGTANKEQEALVDIFTEERARRDQEVENQRTKLKEASSTIQNLLDQLNAARSCRKN
Sbjct: 744 VQKQLGTANKEQEALVDIFTEERARRDQEVENQRTKLKEASSTIQNLLDQLNAARSCRKN 803
>Os10g0181700 ATP-binding region, ATPase-like domain containing protein
Length = 609
Score = 400 bits (1029), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/464 (48%), Positives = 292/464 (62%), Gaps = 16/464 (3%)
Query: 99 TRQFWNAGDYDGK--PDLLGGDPSLRSDSGMDHIRVHPRFLHSNATSHKWALGAFAELLD 156
R FW AG ++ P D + D D RVHP+FLH+NATSHKWA GA AELLD
Sbjct: 22 CRSFWKAGAFESASAPSREFHDALVAGD--FDRARVHPKFLHTNATSHKWAFGAIAELLD 79
Query: 157 NSLDEVANGATYVNIDMLENKKDGTRMVSVEDDGGGMDPDKMWHCMSLGYSAKSKVKDTI 216
N++DE+ NGAT++ +D N KD + M+ +DDGGGMDP+ + CMSLG+S K K K TI
Sbjct: 80 NAVDEICNGATFIKVDKSVNLKDNSTMLVFQDDGGGMDPEGVRRCMSLGFSTK-KSKKTI 138
Query: 217 GQYGNGFKTSTMRLGADVLVLSRSCGNGGRRRTQSIGMLSYTFLRETRKDDIIVPMIDYE 276
GQYGNGFKTSTMRLGAD +V +R+ N G T SIG+LSYTFLR T KDDI+VPM+D++
Sbjct: 139 GQYGNGFKTSTMRLGADAIVFTRA--NRGSNVTLSIGLLSYTFLRRTMKDDIVVPMLDFK 196
Query: 277 KGQQYWKRMMRTTSIDWQTSLATIIEWSPYSSEAELLQEFSSIKEQGTRIIIYNLWENEQ 336
+ ++ + DW +SL I+EWSP+SS+ ELLQ+F I GT++ IYNLW N+
Sbjct: 197 IQDGHIVPLVYGSQGDWDSSLKIILEWSPFSSKEELLQQFKDIVSHGTKVAIYNLWMNDD 256
Query: 337 GELELDFDTDVNDIQIRGGNRDQKNIQLAKQFPNSRHF-FTYRHSLQSYASILYLRVPSV 395
G LELDF+ D DI +R ++ + A++ +H R SL++Y SILYL+
Sbjct: 257 GLLELDFEDDDEDILLRDQDKASGGVTKAQKEIVQQHISHRLRFSLRAYTSILYLKKFEN 316
Query: 396 FQMILRGKEIEHHNIIGDMMMKNHVIYKPVMTDGFPRDIDMMT-DVTIGFVKDAKHHIPI 454
FQ+ILRGK +E I ++ K V YKP + D +++ V +GF K+A + I
Sbjct: 317 FQIILRGKPVEQIRIADELKFKKLVTYKPQVA----HDSQVVSVKVDVGFAKEAP-VLGI 371
Query: 455 QGFNVYHKNRLIKPFWRVWALPGIQGRGVIGVLEVNFVEPAHDKQDFERTNSLARLEARL 514
G NVYHKNRLI PFW+V +GR V+GVLE NF+EPAHDKQDFERT RLEA+L
Sbjct: 372 FGMNVYHKNRLIMPFWKVLQEGSSRGRSVVGVLEANFIEPAHDKQDFERTPLFIRLEAKL 431
Query: 515 NLMQKKYWSDNCHRIGYGGNSANRKSGREYKGPTSDQSPEGCRS 558
+ YW + CH IGY +S +YK D G +S
Sbjct: 432 RQIILDYWKEKCHLIGYQPVDPQLRS--QYKAALKDSGNPGPKS 473
>Os01g0549200 Conserved hypothetical protein
Length = 188
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/175 (46%), Positives = 112/175 (64%), Gaps = 7/175 (4%)
Query: 349 DIQIRGGNRDQKNIQLAKQFPNSRHFFT-YRHSLQSYASILYLRVPSVFQMILRGKEIEH 407
DI I G +R + N A + + T R+SL++Y S+LYL +P F+++LRG ++E
Sbjct: 1 DILITGAHR-KVNTNKADKVATQNYVSTRLRYSLRAYTSVLYLHIPDNFRIVLRGHDVES 59
Query: 408 HNIIGDMMMKNHVIYKPVMTDGFPRDIDMMTDVTIGFVKDAKHHIPIQGFNVYHKNRLIK 467
HN+I D+M V+YKP + G ++ TIGFVK A I +QGFNVYHKNRLI
Sbjct: 60 HNVINDLMYPECVLYKPQIA-GLA---ELSAITTIGFVKGAPE-IDVQGFNVYHKNRLIA 114
Query: 468 PFWRVWALPGIQGRGVIGVLEVNFVEPAHDKQDFERTNSLARLEARLNLMQKKYW 522
PFW+V +GRGV+G+LE NF++P HDKQDFE++ RLE+RL M +YW
Sbjct: 115 PFWKVANNSYGKGRGVVGILEANFIKPTHDKQDFEKSVLYQRLESRLKEMTYEYW 169
>Os06g0622000 ATP-binding region, ATPase-like domain containing protein
Length = 792
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 119/447 (26%), Positives = 200/447 (44%), Gaps = 63/447 (14%)
Query: 128 DHIRVHPRFLHSNATSHK-WALGAFAELLDNSLDEVANGATYVNIDMLENKKDGTRM--V 184
+ + P +L + + +H W GA AEL+DNS D A+ +++ L +KK ++ +
Sbjct: 221 NFVSTDPSYLRTLSQTHAGWVFGAIAELIDNSRDADASRLN-ISVKSLFSKKADKKIPVL 279
Query: 185 SVEDDGGGMDPDKMWHCMSLGYSAKSKVK-DTIGQYGNGFKTSTMRLGADVLVLSRSCGN 243
SV DDG GM +M +S G+ K + D IG++G GFKT M+LG D +VL+++
Sbjct: 280 SVIDDGHGMTCAEMMRMISFGHKRPDKQRQDQIGRFGIGFKTGAMKLGRDAIVLTQTSS- 338
Query: 244 GGRRRTQSIGMLSYTFLRETRKDDIIVPMIDYEKGQQYWKRMMRTTSIDWQTS----LAT 299
++S+ LS +F KD++ +P++ Y K QY M +S+ + + L
Sbjct: 339 -----SRSVAFLSQSF--NENKDNLEIPVVTYRKEGQY---MEVDSSVQSEATAEYNLNA 388
Query: 300 IIEWSPYSSEAELLQEFSSIKEQ--GTRIIIYNLWENEQGELELDFDTDV---------- 347
I E+SP+ +E + ++ E GT+I I+NL + + LD+ +
Sbjct: 389 IKEFSPF-NEYFIGEKLGIFGEDGTGTQIYIWNL-DRWGADYTLDWSSGKPSEDPVHHGR 446
Query: 348 NDIQIRGGNRDQKNIQLAKQFPNSRHFFTYRHSLQSYASILYLRVPSVFQMILRGKEIEH 407
DI IR + Q + P +SLQSY +++L ++ ++G ++
Sbjct: 447 GDILIRSRRVRLRPGQTSNNVP-------LDYSLQSYLEVMFLN--PRMKISVQGSSVKT 497
Query: 408 HNIIGDMMMKNHVIYKPVMTDGFPRDIDMMTDVTIGFVKDAKHHIPIQGFNVYHKNRLIK 467
+ + K VI +M R I + T+G + G +Y RLI+
Sbjct: 498 RP-LAKTLNKTSVISGEIMG----RTIQL----TLGRSNVEWDRMNC-GIFLYWHGRLIE 547
Query: 468 PFWRVWALP--GIQGRGVIGVLEVNFVEPAHD--------KQDFERTNSLARLEARLNLM 517
+ RV GRGVIGV ++ + D KQ F+ A+LE L
Sbjct: 548 SYKRVGGQKHNADMGRGVIGVADITDLIDDEDGNSWVLNSKQGFQDCEMYAKLEEWLGRK 607
Query: 518 QKKYWSDNCHRIGYGGNSANRKSGREY 544
+YW N + S K+ E+
Sbjct: 608 ADEYWDTNFDTLELRKGSERYKADHEW 634
>Os04g0311100 Hypothetical protein
Length = 63
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/62 (72%), Positives = 53/62 (85%)
Query: 741 LENVQKQLGTANKEQEALVDIFTEERARRDQEVENQRTKLKEASSTIQNLLDQLNAARSC 800
LE+ Q+QL T+NKEQEAL+DIF+EER RRD E EN R KLK+ASSTIQ+LL+QLNAAR
Sbjct: 1 LEDAQRQLETSNKEQEALIDIFSEERGRRDLEEENLRGKLKDASSTIQDLLEQLNAARKG 60
Query: 801 RK 802
RK
Sbjct: 61 RK 62
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.315 0.131 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 26,292,313
Number of extensions: 1145801
Number of successful extensions: 4131
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 4121
Number of HSP's successfully gapped: 5
Length of query: 803
Length of database: 17,035,801
Length adjustment: 109
Effective length of query: 694
Effective length of database: 11,344,475
Effective search space: 7873065650
Effective search space used: 7873065650
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 160 (66.2 bits)