Os02g0469300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ATP-binding region, ATPase-like domain containing protein.
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Os02g0469300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ATP-binding region, ATPase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 110.19 | 0.493 | 6.27 | -0.274 | 1.07 | -0.692 | 0.747 | -1.43 | -0.0318 | 3.95 | 1006 | 8934 | -- | -- |
| 111.44 | 0.492 | 6.26 | -0.173 | 1.06 | -0.899 | 0.74 | -- | -0.0477 | 3.94 | 1005 | 9205 | -- | -- |
| 111.78 | 0.492 | 6.27 | -0.283 | 1.07 | -0.691 | -- | -1.43 | -0.0359 | 3.87 | 1006 | 8963 | -- | -- |
| 113.01 | 0.495 | 6.26 | -0.184 | 1.06 | -0.9 | -- | -- | -0.0496 | 3.88 | 1005 | 9211 | -- | -- |
| 174.06 | 0.614 | 6.27 | -0.184 | -- | -0.76 | -- | -1.12 | 0.00529 | -- | 1003 | 9029 | -- | -- |
| 126.11 | 0.526 | 6.23 | -0.289 | 1.07 | -- | 0.752 | -- | 0.0688 | 3.95 | -- | -- | -- | -- |
| 127.71 | 0.529 | 6.23 | -0.299 | 1.07 | -- | -- | -- | 0.0646 | 3.87 | -- | -- | -- | -- |
| 174.71 | 0.616 | 6.26 | -0.133 | -- | -0.939 | -- | -- | 0.000493 | -- | 1003 | 9162 | -- | -- |
| 113.86 | 0.497 | 6.25 | -- | 1.06 | -0.931 | -- | -- | -0.0325 | 3.87 | 1005 | 9266 | -- | -- |
| 191.02 | 0.646 | 6.24 | -0.255 | -- | -- | -- | -- | 0.0933 | -- | -- | -- | -- | -- |
| 130.07 | 0.533 | 6.22 | -- | 1.07 | -- | -- | -- | 0.0979 | 3.87 | -- | -- | -- | -- |
| 175.15 | 0.616 | 6.25 | -- | -- | -0.962 | -- | -- | 0.0171 | -- | 1002 | 9206 | -- | -- |
| 192.73 | 0.648 | 6.23 | -- | -- | -- | -- | -- | 0.122 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 108.12 | wind | 5.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 2 | 108.19 | wind | 5.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 3 | 108.45 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 7 | 108.80 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 8 | 108.97 | wind | 5.0 | 14400 | > th | dose independent | rect. | 13 | 6 |
| 10 | 109.05 | wind | 5.0 | 14400 | < th | dose independent | rect. | 13 | 6 |
| 34 | 109.93 | wind | 5.0 | 14400 | > th | dose independent | rect. | 16 | 3 |
| 35 | 109.99 | wind | 5.0 | 14400 | < th | dose independent | rect. | 16 | 3 |
| 39 | 110.13 | wind | 5.0 | 14400 | < th | dose independent | rect. | 13 | 14 |
| 40 | 110.13 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 43 | 110.20 | atmosphere | 1005.0 | 4320 | < th | dose independent | rect. | 6 | 4 |
| 45 | 110.24 | wind | 5.0 | 14400 | > th | dose independent | rect. | 13 | 14 |
| 50 | 110.28 | atmosphere | 1005.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 56 | 110.35 | atmosphere | 1005.0 | 4320 | > th | dose independent | rect. | 6 | 4 |
| 71 | 110.49 | atmosphere | 1005.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 79 | 110.51 | atmosphere | 1005.0 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 88 | 110.62 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 92 | 110.64 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 120 | 110.77 | atmosphere | 1005.0 | 4320 | < th | dose dependent | rect. | 4 | 6 |
| 125 | 110.79 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 142 | 110.83 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 152 | 110.86 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 14 | 4 |
| 169 | 110.93 | atmosphere | 1005.0 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 189 | 110.99 | atmosphere | 1005.0 | 4320 | < th | dose dependent | rect. | 9 | 1 |
| 202 | 111.05 | atmosphere | 1005.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 213 | 111.08 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 232 | 111.14 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 258 | 111.22 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 7 |
| 283 | 111.31 | atmosphere | 1000.0 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 285 | 111.32 | atmosphere | 1000.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 316 | 111.42 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 9 |
| 322 | 111.44 | atmosphere | 1005.0 | 4320 | < th | dose dependent | sin | 5 | NA |
| 353 | 111.51 | wind | 5.0 | 14400 | < th | dose independent | sin | 18 | NA |
| 356 | 111.51 | atmosphere | 1005.0 | 4320 | < th | dose independent | rect. | 21 | 14 |
| 360 | 111.52 | atmosphere | 1000.0 | 4320 | > th | dose independent | rect. | 11 | 3 |
| 396 | 111.60 | atmosphere | 1005.0 | 4320 | > th | dose independent | rect. | 20 | 15 |
| 471 | 111.79 | wind | 5.0 | 14400 | > th | dose independent | sin | 18 | NA |
| 472 | 111.79 | atmosphere | 1000.0 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 490 | 111.82 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 493 | 111.82 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 496 | 111.83 | atmosphere | 1005.0 | 4320 | < th | dose independent | sin | 7 | NA |
| 556 | 111.93 | atmosphere | 1005.0 | 4320 | > th | dose independent | sin | 7 | NA |
| 616 | 112.01 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 17 | 4 |
| 677 | 112.10 | wind | 9.0 | 4320 | > th | dose independent | rect. | 17 | 4 |
| 736 | 112.18 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 17 | 1 |
| 895 | 112.38 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 17 | 1 |
| 921 | 112.41 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 17 | 7 |