BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0287900 Os02g0287900|AK106386
(422 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0287900 Curculin-like (mannose-binding) lectin domain ... 693 0.0
Os02g0288000 Cyclin-like F-box domain containing protein 368 e-102
Os02g0294100 Cyclin-like F-box domain containing protein 244 1e-64
Os02g0287800 127 2e-29
Os04g0349550 124 2e-28
Os02g0288925 86 5e-17
Os04g0324600 68 1e-11
Os04g0313500 Cyclin-like F-box domain containing protein 66 4e-11
>Os02g0287900 Curculin-like (mannose-binding) lectin domain containing protein
Length = 422
Score = 693 bits (1788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/422 (84%), Positives = 356/422 (84%)
Query: 1 MQMEDEATRXXXXXXXXXXXXXVXXXXXXXXXXXXXXXFPTTLVRAALVSSRWLGLASDS 60
MQMEDEATR V FPTTLVRAALVSSRWLGLASDS
Sbjct: 1 MQMEDEATRPSSPPPAASAASSVLADDDLLREILLRLAFPTTLVRAALVSSRWLGLASDS 60
Query: 61 SFLRRFRARNPPRLLGFYHTARRDEQPAFVPLPQPPELAPVXXXXXXXXXXXXDVSAVVF 120
SFLRRFRARNPPRLLGFYHTARRDEQPAFVPLPQPPELAPV DVSAVVF
Sbjct: 61 SFLRRFRARNPPRLLGFYHTARRDEQPAFVPLPQPPELAPVLRRLGGFALGGADVSAVVF 120
Query: 121 DCRNGRLLRAEFPPPPDELRFGVVSXXXXXXXXXXXXXXXXHSQLHQVPNDARVLRPGWM 180
DCRNGRLLRAEFPPPPDELRFGVVS HSQLHQVPNDARVLRPGWM
Sbjct: 121 DCRNGRLLRAEFPPPPDELRFGVVSPLLPPARKPPDLPPNLHSQLHQVPNDARVLRPGWM 180
Query: 181 LLPXXXXXXXXXXLSYTLVVLIRRGRGLFARAVLVRGESDDQIRTSDSIELPNHYWPNKK 240
LLP LSYTLVVLIRRGRGLFARAVLVRGESDDQIRTSDSIELPNHYWPNKK
Sbjct: 181 LLPEEEEDDGGDDLSYTLVVLIRRGRGLFARAVLVRGESDDQIRTSDSIELPNHYWPNKK 240
Query: 241 MNRGLLFHGSLYMLGREHVLGLNLASMSLFLIKLPDGVEQLEHMGNLELLRDGDSGLYLA 300
MNRGLLFHGSLYMLGREHVLGLNLASMSLFLIKLPDGVEQLEHMGNLELLRDGDSGLYLA
Sbjct: 241 MNRGLLFHGSLYMLGREHVLGLNLASMSLFLIKLPDGVEQLEHMGNLELLRDGDSGLYLA 300
Query: 301 HLKGFQIHVWHRATDGGGNGGDWEMVDTMSLHQSFGQVARPDWESGDPSLGDALVSLRRV 360
HLKGFQIHVWHRATDGGGNGGDWEMVDTMSLHQSFGQVARPDWESGDPSLGDALVSLRRV
Sbjct: 301 HLKGFQIHVWHRATDGGGNGGDWEMVDTMSLHQSFGQVARPDWESGDPSLGDALVSLRRV 360
Query: 361 EDNAELFLTIDRVIFHIHIASRTANKVFEMAPKEDIGFEIFPFMMIWPPTFPALNYDDDD 420
EDNAELFLTIDRVIFHIHIASRTANKVFEMAPKEDIGFEIFPFMMIWPPTFPALNYDDDD
Sbjct: 361 EDNAELFLTIDRVIFHIHIASRTANKVFEMAPKEDIGFEIFPFMMIWPPTFPALNYDDDD 420
Query: 421 DQ 422
DQ
Sbjct: 421 DQ 422
>Os02g0288000 Cyclin-like F-box domain containing protein
Length = 412
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/395 (53%), Positives = 258/395 (65%), Gaps = 29/395 (7%)
Query: 39 FPTTLVRAALVSSRWLGLASDSSFLRRFRARNPPRLLGFYHTAR---RDEQPAFVPLPQP 95
PTTLVRAALVS+RWL LASD +FLRRFRAR+PPRLLGFYHTAR +DE PAFVPLPQP
Sbjct: 36 LPTTLVRAALVSTRWLRLASDPAFLRRFRARHPPRLLGFYHTARARFQDEVPAFVPLPQP 95
Query: 96 PELAPVXXXXXXXXXXXXDVSA----VVFDCRNGRLLRAEFPPPPDELRFGVVSXXXXXX 151
PELA S V+ CRNGR+L AEFPP D R ++S
Sbjct: 96 PELAAALRGARLRLAPGSSGSGPDAPVILSCRNGRVLAAEFPP--DGPRVSIISPMHPAR 153
Query: 152 XXXXXXXXXXHSQLHQVPND-ARVLRPGWMLLPXXXXXXXXXXLSYTLVVLIRRGRGLFA 210
++++P ++L MLL SYT V +R+ + + A
Sbjct: 154 HPPALPL------VYELPRQPGQILHASCMLL---FPDVGSDDPSYTFVEFLRKDQEMLA 204
Query: 211 RAVLVRGESDD--QIRTSDSIELPNHYWPNKKMNRGLLFHGSLYMLG-REHVLGLNLASM 267
+AV VR E D +R S +IE+ + + + R +L +G+LY+LG + HVLGLNLASM
Sbjct: 205 KAVSVRAEISDLNSVRESATIEIQESW--ERSIRRDVLVNGNLYLLGGKGHVLGLNLASM 262
Query: 268 SLFLIKLPDGVEQLEHMGNLELLRDGDSGLYLAHLKGFQIHVWHRATDGGGNGGDWEMVD 327
LFL +LPDGV+QL MGN+ELLR GDSGLYL HLKGFQIHVW RA+D GG+WE+VD
Sbjct: 263 RLFLFRLPDGVQQLHRMGNIELLRAGDSGLYLIHLKGFQIHVWFRASDSDIGGGNWELVD 322
Query: 328 TMSLHQSFGQVARPDWESGDPSLGDALVSLRRVEDNAELFLTIDRVIFHIHIASRTANKV 387
+ L +SFGQ A P+WES GDALV+L RVEDNAE+FL +DRVIFHIHI +RT NKV
Sbjct: 323 NICLGESFGQFAEPNWES-----GDALVALHRVEDNAEVFLRVDRVIFHIHIMNRTVNKV 377
Query: 388 FEMAPKEDIGFEIFPFMMIWPPTFPALNYDDDDDQ 422
FEM+P+ F+IFPFMM+WPPTFP L D D DQ
Sbjct: 378 FEMSPEAYRYFDIFPFMMLWPPTFPQLRNDHDQDQ 412
>Os02g0294100 Cyclin-like F-box domain containing protein
Length = 423
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 159/389 (40%), Positives = 212/389 (54%), Gaps = 32/389 (8%)
Query: 40 PTTLVRAALVSSRWLGLASDSSFLRRFRARNPPRLLGFYHTARRDEQPAFVPLPQPPELA 99
PT LVRAALV RWL ASD +FLRRF +PPRLLGFY + +P FVPLP PPELA
Sbjct: 46 PTFLVRAALVCRRWLRHASDRAFLRRFAVLHPPRLLGFYVDSASLPRPRFVPLPHPPELA 105
Query: 100 PVXXXXXXXXXXXXDV----SAVVFDCRNGRLLRAEFPPPPDELRFGVVSXXXXXXXXXX 155
V D+ ++ CRNGRLL R G S
Sbjct: 106 AVVRRGSFDLGTAADLHFHLGTGIYCCRNGRLLVCH--------RGGGESTLQLRRPLHP 157
Query: 156 XXXXXXHSQLHQ----VPNDARVLRPGWMLLPXXXXXXXXXXLSYTLVVLIRRGRGLFAR 211
S +P + R R ++LLP ++ T+V L+ R +FA+
Sbjct: 158 ASDGAVISTFRTPPRPLPPNQRHTR--YILLPEDGGDGDGDAVACTVVTLVSSEREVFAK 215
Query: 212 A-VLVRGESDDQIRTSDSIELPNHYWPNKKMNRGLLFHGSLYMLGRE-HVLGLNLASMSL 269
++R D +TS IELP H+ + ++RG L +G LYMLG ++LGL L SMSL
Sbjct: 216 VEKILRAGVWDVAQTSAPIELPAHW--RRSLSRGFLVNGKLYMLGTTGYILGLELVSMSL 273
Query: 270 FLIKLPDGVEQ---LEHMGNLELLRDGDSGLYLAHLKGFQIHVWHRATDGGGNGGDWEMV 326
F I++PD V +++L + SGLYL H++GF+IHVW TDG + DW +V
Sbjct: 274 FFIEVPDAVRDDCPESFQLSVKLSQAEKSGLYLIHVEGFKIHVWLHGTDGNSSA-DWNLV 332
Query: 327 DTMSLHQSFGQVARPDWESGDPSLGDALVSLRRVEDNAE-LFLTIDRVIFHIHIASRTAN 385
+T+ L + FG + +P WESGD + +SL DNAE +FL +D +F + I SRT
Sbjct: 333 NTICLREVFGHLVKPSWESGD-----SRISLPGSGDNAEFVFLEVDGEVFCMDIISRTVE 387
Query: 386 KVFEMAPKEDIGFEIFPFMMIWPPTFPAL 414
KV+EMA K+D FEI+PFMM+WPP FPAL
Sbjct: 388 KVYEMAMKDDFLFEIYPFMMVWPPIFPAL 416
>Os02g0287800
Length = 450
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 124/236 (52%), Gaps = 19/236 (8%)
Query: 195 SYTLVVLIRRGR-------GLFARAVLVR-GESDDQIRTSDSIELPNHYWPNKKMNRGLL 246
SYT+V L+R R FA+ ++R G DD +R + +ELP + NR LL
Sbjct: 219 SYTVVTLVRSKRVDWRVWWEFFAKVSVLRAGAWDDDVRATAPVELPARCRGDTTWNRALL 278
Query: 247 FHGSLYMLGREH--VLGLNLASMSLFLIKLPDGVEQLEHMGNLELLRDGDSGLYLAHLKG 304
G LY+LG + +L L+LASM+ I LPDGV E G+L+L R D+G+ L H+ G
Sbjct: 279 VQGKLYVLGMQSHAILVLDLASMATSFINLPDGVRH-EEDGDLDLFRSNDAGVNLIHVNG 337
Query: 305 FQIHVWHRATDGGG----NGGDWEMVDTMSLHQSFGQVARPDWESGDPSLGDALVSLRRV 360
FQ +W R D G+W +VD + + + F +A+ G+ +G + ++
Sbjct: 338 FQARLWRRGGDDDDGDGMTAGNWVLVDDIGVRRGFDHLAK---VGGEMDIGGPVGVIKVG 394
Query: 361 EDNAELFLTIDRVIFHIHIASRTANKVFEMAPKE-DIGFEIFPFMMIWPPTFPALN 415
+D +FL +D + ++ I +R K+F+ +PK + I P M+WPP FP L
Sbjct: 395 DDCEFMFLCVDGDVLYMDIRTRMVKKIFKASPKRGGVLPVIHPLTMVWPPIFPVLE 450
>Os04g0349550
Length = 384
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 110/188 (58%), Gaps = 15/188 (7%)
Query: 226 SDSIELPNHYWPNKKMNRGLLFHGSLYMLG-REHVLGLNLASMSLFLIKLPDGVEQLEHM 284
S I+LP+ W +K N GLL YMLG +++LGL+L SMSLF+I LP+G+E +
Sbjct: 199 STMIDLPSR-WLQRK-NSGLLIDTKFYMLGPSKYILGLDLVSMSLFIIDLPNGLEH-SNP 255
Query: 285 GNLELLRDGDSGLYLAHLKGFQIHVWHRATDGGGNGGDWEMVDTMSLHQSFGQVARPDWE 344
L+L ++ DS LY+ HL G ++H+W + GN +W ++DT+S + FG +A P W+
Sbjct: 256 EMLQLSQEEDSKLYIFHLNGLKLHIWFHDINNTGNTSNWVLIDTISFLEVFGHIANPSWD 315
Query: 345 SGDPSLGDALVSLRRVEDNAE-LFLTIDRVIFHIHIASRTANKVFEMAPKEDIGFEIFPF 403
S + + + R ++ + ++L +D ++ +HI R KVF+ F + PF
Sbjct: 316 S------EVDIKIARGGNSGDFIYLHVDDDVYLVHIKKRMVEKVFDNGKV----FRVHPF 365
Query: 404 MMIWPPTF 411
MM WPPTF
Sbjct: 366 MMAWPPTF 373
>Os02g0288925
Length = 424
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 87/164 (53%), Gaps = 18/164 (10%)
Query: 259 VLGLNLASMSLFLIKLPDGVE-------QLEHMGNLELLR-DGDSGLYLAHLKGFQIHVW 310
VL L+L S SL+ I+LPDGVE + ++ R DSG+Y+A LK Q+ +W
Sbjct: 265 VLVLDLKSSSLYTIQLPDGVEFPPVMMWYNDRSHDVLFGRASDDSGVYIADLKEPQLRIW 324
Query: 311 HRATDGGGNGGDWEMVDTMSLHQSFGQVARPDWESGDPSLGDALVSLRRVEDNAE-LFLT 369
G G W +VDT+ L +S + GD +V + V D+AE LFL
Sbjct: 325 --LLKHGSTG--WTLVDTICL-RSMCANLHINCVGGD----SRVVYMDYVGDDAEFLFLK 375
Query: 370 IDRVIFHIHIASRTANKVFEMAPKEDIGFEIFPFMMIWPPTFPA 413
D ++ + SR +KV+E+ K++I F I PFMMIWPP FP
Sbjct: 376 TDECALYLDVKSRQLHKVYEVTEKDEILFSIMPFMMIWPPIFPV 419
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 62/110 (56%), Gaps = 5/110 (4%)
Query: 39 FPTTLVRAALVSSRWLGLASDSSFLRRFRARNPPRLLGFYHTARR--DEQPAFV---PLP 93
FPTTLVRAAL RWL +ASD SFLRRFR +PPRLLGFY T+ + P FV P
Sbjct: 45 FPTTLVRAALACRRWLRVASDPSFLRRFRELHPPRLLGFYVTSLKIPRAHPLFVPMPPPA 104
Query: 94 QPPELAPVXXXXXXXXXXXXDVSAVVFDCRNGRLLRAEFPPPPDELRFGV 143
+PPEL PV + ++ CRNG +L + EL++ V
Sbjct: 105 RPPELDPVVLRGGNFSLAYEGYTTSIYQCRNGSILLFKERHDRRELKYAV 154
>Os04g0324600
Length = 531
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 87/198 (43%), Gaps = 36/198 (18%)
Query: 247 FHGSLYMLGRE-HVLGLNLASMSLFLIKLPDGVEQ-------LEHMGNLELLRDGDSGLY 298
+G +Y++ + LGL L + +++LPD + + L
Sbjct: 256 INGEVYVVTTSGYTLGLRLGTTRFSVVELPDAARSSANFRMAWSYAAAADDDDFARGRLC 315
Query: 299 LAHLKGFQIHVWHRAT-----DGGGNGGDWEMVDTMSLHQSFGQVAR-PD-WESGDPSLG 351
L H G ++ +WHR T DGG G W + DT + ++ +V PD W +G
Sbjct: 316 LVHGDGTRLSIWHRKTTTMEDDGGAAGVGWRLADTFCVREACERVEWLPDGWWTGR---- 371
Query: 352 DALVSLRRVEDNAEL-FLTIDRV--IFHIHIASRTANKVFEMAPKEDIG----------- 397
V++ V DNAE L +++V + ++H+ RT KV+E +
Sbjct: 372 ---VAVIAVGDNAEFALLDLEKVGVVIYVHLRWRTVKKVYERKLPDADDGGGGGGDRQRP 428
Query: 398 FEIFPFMMIWPPTFPALN 415
+FP +WPPTFPAL+
Sbjct: 429 VRVFPMTTVWPPTFPALD 446
>Os04g0313500 Cyclin-like F-box domain containing protein
Length = 538
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 85/200 (42%), Gaps = 39/200 (19%)
Query: 247 FHGSLYMLGRE-HVLGLNLASMSLFLIKLPDGVEQ-------LEHMGNLELLRDGDSG-L 297
+G +Y++ + LGL L + +++LPD H D G L
Sbjct: 258 INGDVYVVTTSGYTLGLRLGTTRFTVVELPDAARSSANFRMAWSHAAAAADDDDVARGRL 317
Query: 298 YLAHLKGFQIHVWHRAT-----DGGGNGGDWEMVDTMSLHQSFGQVAR-PD-WESGDPSL 350
L H G ++ VWHR T DGG G W + DT + ++ ++ PD W +G
Sbjct: 318 CLVHGDGTRLSVWHRKTTTTEDDGGAAGVGWRLADTFCVREACERIEWLPDGWWTGR--- 374
Query: 351 GDALVSLRRVEDNAELFLTID----RVIFHIHIASRTANKVFE-----------MAPKED 395
V++ V DNAE F +D V+ ++H+ RT KV+E
Sbjct: 375 ----VAVIAVGDNAE-FALLDLENVGVVIYVHLQWRTVKKVYERKLADADDGGGGGGDRQ 429
Query: 396 IGFEIFPFMMIWPPTFPALN 415
+FP +WPPTFP L+
Sbjct: 430 PPVRVFPLTTVWPPTFPELD 449
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.141 0.440
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,453,365
Number of extensions: 621630
Number of successful extensions: 1828
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 1801
Number of HSP's successfully gapped: 10
Length of query: 422
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 318
Effective length of database: 11,605,545
Effective search space: 3690563310
Effective search space used: 3690563310
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 157 (65.1 bits)