Os02g0294100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os02g0294100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 60.64 | 0.366 | 8.1 | 1 | 0.72 | -0.82 | 0.782 | 4.25 | 0.643 | 4.42 | 24.66 | 1651 | -- | -- |
| 66.96 | 0.381 | 8.21 | -0.0362 | 0.787 | -0.439 | 0.767 | -- | 0.463 | 4.4 | 21.14 | 8092 | -- | -- |
| 62.2 | 0.367 | 8.1 | 1.02 | 0.76 | -0.783 | -- | 4.09 | 0.656 | 4.55 | 24.42 | 1561 | -- | -- |
| 68.05 | 0.387 | 8.23 | -0.136 | 0.588 | -0.64 | -- | -- | 0.397 | 5.5 | 21.16 | 7864 | -- | -- |
| 80.8 | 0.421 | 8.22 | 0.0702 | -- | -1.1 | -- | 1.36 | 0.453 | -- | 24.42 | 1561 | -- | -- |
| 73.14 | 0.401 | 8.25 | -0.264 | 0.773 | -- | 0.706 | -- | 0.293 | 4.57 | -- | -- | -- | -- |
| 74.46 | 0.404 | 8.25 | -0.268 | 0.779 | -- | -- | -- | 0.289 | 4.63 | -- | -- | -- | -- |
| 74.56 | 0.402 | 8.21 | -0.0732 | -- | -1.06 | -- | -- | 0.458 | -- | 24.2 | 222 | -- | -- |
| 68.42 | 0.385 | 8.21 | -- | 0.784 | -0.488 | -- | -- | 0.449 | 4.57 | 18.1 | 7508 | -- | -- |
| 106.73 | 0.483 | 8.26 | -0.238 | -- | -- | -- | -- | 0.31 | -- | -- | -- | -- | -- |
| 76.35 | 0.409 | 8.24 | -- | 0.774 | -- | -- | -- | 0.319 | 4.64 | -- | -- | -- | -- |
| 74.31 | 0.401 | 8.23 | -- | -- | -1.08 | -- | -- | 0.423 | -- | 24.2 | 253 | -- | -- |
| 108.23 | 0.486 | 8.25 | -- | -- | -- | -- | -- | 0.336 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 53.10 | radiation | 10 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 4 | 53.46 | wind | 3 | 43200 | > th | dose dependent | rect. | 13 | 3 |
| 20 | 53.57 | wind | 5 | 43200 | < th | dose independent | rect. | 15 | 2 |
| 21 | 53.59 | radiation | 20 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 38 | 53.65 | radiation | 40 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 39 | 53.65 | wind | 3 | 43200 | > th | dose dependent | rect. | 12 | 9 |
| 47 | 53.72 | radiation | 10 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 50 | 53.73 | wind | 5 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 65 | 53.85 | radiation | 40 | 43200 | > th | dose independent | rect. | 9 | 3 |
| 67 | 53.85 | radiation | 40 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 68 | 53.86 | wind | 5 | 43200 | < th | dose independent | rect. | 14 | 7 |
| 88 | 53.89 | radiation | 40 | 43200 | > th | dose independent | rect. | 14 | 22 |
| 91 | 53.91 | radiation | 40 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 97 | 53.93 | wind | 5 | 43200 | > th | dose independent | rect. | 14 | 6 |
| 127 | 53.96 | wind | 9 | 43200 | < th | dose dependent | rect. | 11 | 6 |
| 175 | 54.04 | radiation | 20 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 176 | 54.06 | radiation | 20 | 43200 | > th | dose independent | sin | 9 | NA |
| 186 | 54.09 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 213 | 54.12 | radiation | 40 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 214 | 54.12 | radiation | 40 | 43200 | < th | dose dependent | rect. | 9 | 3 |
| 219 | 54.14 | radiation | 40 | 43200 | > th | dose independent | sin | 9 | NA |
| 228 | 54.16 | radiation | 40 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 350 | 54.28 | radiation | 30 | 43200 | < th | dose dependent | rect. | 3 | 9 |
| 361 | 54.29 | radiation | 20 | 43200 | < th | dose independent | rect. | 8 | 5 |
| 376 | 54.30 | radiation | 20 | 43200 | < th | dose independent | rect. | 9 | 3 |
| 404 | 54.32 | humidity | 80 | 43200 | < th | dose independent | rect. | 20 | 3 |
| 410 | 54.33 | radiation | 10 | 43200 | > th | dose dependent | sin | 8 | NA |
| 453 | 54.36 | humidity | 80 | 43200 | > th | dose independent | rect. | 20 | 4 |
| 499 | 54.38 | wind | 9 | 43200 | < th | dose dependent | rect. | 11 | 11 |
| 501 | 54.39 | radiation | 20 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 674 | 54.47 | radiation | 30 | 43200 | < th | dose dependent | sin | 8 | NA |
| 710 | 54.50 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 738 | 54.51 | radiation | 20 | 43200 | < th | dose independent | rect. | 2 | 11 |
| 812 | 54.53 | radiation | 40 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 906 | 54.57 | wind | 1 | 43200 | < th | dose dependent | rect. | 23 | 3 |
| 967 | 54.60 | radiation | 40 | 43200 | > th | dose independent | no | NA | NA |