BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0195500 Os02g0195500|AK121049
(891 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0195500 Protein of unknown function DUF1680 family pro... 1655 0.0
Os06g0612900 Protein of unknown function DUF1680 family pro... 995 0.0
Os06g0613000 Conserved hypothetical protein 212 1e-54
Os06g0612950 Protein of unknown function DUF1680 family pro... 104 3e-22
>Os02g0195500 Protein of unknown function DUF1680 family protein
Length = 891
Score = 1655 bits (4286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 806/866 (93%), Positives = 806/866 (93%)
Query: 26 KDCTNGFPGLTASHTERXXXXXEQRPDGEVEAARVXXXXXXXXXXXXXXXXXXXXXTPTD 85
KDCTNGFPGLTASHTER EQRPDGEVEAARV TPTD
Sbjct: 26 KDCTNGFPGLTASHTERAAAAAEQRPDGEVEAARVLDLLLPHGHGHGDDHDGDRHLTPTD 85
Query: 86 ESTWMSLMPRRLLASPVSSPRRDAFDWLMLYRNXXXXXXXXXXXXXXXXXXXXXXXXHDV 145
ESTWMSLMPRRLLASPVSSPRRDAFDWLMLYRN HDV
Sbjct: 86 ESTWMSLMPRRLLASPVSSPRRDAFDWLMLYRNLRGSGSGAGAIAASGGALLAEASLHDV 145
Query: 146 RLQPGTVYWQAQQTNLEYXXXXXXXXXXWSFRTQAGLPASGAPYGGWEGPGVELRGHFVG 205
RLQPGTVYWQAQQTNLEY WSFRTQAGLPASGAPYGGWEGPGVELRGHFVG
Sbjct: 146 RLQPGTVYWQAQQTNLEYLLLLDVDRLVWSFRTQAGLPASGAPYGGWEGPGVELRGHFVG 205
Query: 206 HYLSATAKMWASTHNDTLLAKMSSVVDALHDCQKKMGSGYLSAFPSEFFDRVESIKAVWA 265
HYLSATAKMWASTHNDTLLAKMSSVVDALHDCQKKMGSGYLSAFPSEFFDRVESIKAVWA
Sbjct: 206 HYLSATAKMWASTHNDTLLAKMSSVVDALHDCQKKMGSGYLSAFPSEFFDRVESIKAVWA 265
Query: 266 PYYTIHKIMQGLLDQYTVAGNSKALDLVVGMANYFSDRVKNVIQKYSIERHWASLNEESG 325
PYYTIHKIMQGLLDQYTVAGNSKALDLVVGMANYFSDRVKNVIQKYSIERHWASLNEESG
Sbjct: 266 PYYTIHKIMQGLLDQYTVAGNSKALDLVVGMANYFSDRVKNVIQKYSIERHWASLNEESG 325
Query: 326 GMNDVLYQLYTITNDQKHLTLAHLFDKPCFLGLLAVQADSISGFHSNTHIPVVIGAQMRY 385
GMNDVLYQLYTITNDQKHLTLAHLFDKPCFLGLLAVQADSISGFHSNTHIPVVIGAQMRY
Sbjct: 326 GMNDVLYQLYTITNDQKHLTLAHLFDKPCFLGLLAVQADSISGFHSNTHIPVVIGAQMRY 385
Query: 386 EVTGDLLYKQIATFFMDTINSSHSYATGGTSAGEFWTNPKRLADTLSTENEESCTTYNML 445
EVTGDLLYKQIATFFMDTINSSHSYATGGTSAGEFWTNPKRLADTLSTENEESCTTYNML
Sbjct: 386 EVTGDLLYKQIATFFMDTINSSHSYATGGTSAGEFWTNPKRLADTLSTENEESCTTYNML 445
Query: 446 KVSRNLFRWTKELSYADYYERALINGVLSIQRGTDPGVMIYMLPQAPGRSKAVSYHGWGT 505
KVSRNLFRWTKELSYADYYERALINGVLSIQRGTDPGVMIYMLPQAPGRSKAVSYHGWGT
Sbjct: 446 KVSRNLFRWTKELSYADYYERALINGVLSIQRGTDPGVMIYMLPQAPGRSKAVSYHGWGT 505
Query: 506 KYDSFWCCYGTGIESFSKLGDSIYFEEKGDRPVLNIIQYIPSAYNWKAAGLTVNQQLKPI 565
KYDSFWCCYGTGIESFSKLGDSIYFEEKGDRPVLNIIQYIPSAYNWKAAGLTVNQQLKPI
Sbjct: 506 KYDSFWCCYGTGIESFSKLGDSIYFEEKGDRPVLNIIQYIPSAYNWKAAGLTVNQQLKPI 565
Query: 566 SSLDMFLQVSLSTSAKTNGQSATLNVRIPSWTSANGAKATLNDNDLGLMSPGSFLSISKQ 625
SSLDMFLQVSLSTSAKTNGQSATLNVRIPSWTSANGAKATLNDNDLGLMSPGSFLSISKQ
Sbjct: 566 SSLDMFLQVSLSTSAKTNGQSATLNVRIPSWTSANGAKATLNDNDLGLMSPGSFLSISKQ 625
Query: 626 WNSDDHLSLQFPITLRTEAIKDDRPEYASLQAILFGPFVLAGLSTGDWNAEAGNTSAISD 685
WNSDDHLSLQFPITLRTEAIKDDRPEYASLQAILFGPFVLAGLSTGDWNAEAGNTSAISD
Sbjct: 626 WNSDDHLSLQFPITLRTEAIKDDRPEYASLQAILFGPFVLAGLSTGDWNAEAGNTSAISD 685
Query: 686 WISPVPSSYNSQLVTFTQESSGKTFVLSSANGSLTMQERPTVDGTDTAIHATFRVHPQDS 745
WISPVPSSYNSQLVTFTQESSGKTFVLSSANGSLTMQERPTVDGTDTAIHATFRVHPQDS
Sbjct: 686 WISPVPSSYNSQLVTFTQESSGKTFVLSSANGSLTMQERPTVDGTDTAIHATFRVHPQDS 745
Query: 746 AGQLDTQGATLKGTSVQIEPFDLPGTVITNNLTQSAQKSSDSLFNIVPGLDGNPNSVSLE 805
AGQLDTQGATLKGTSVQIEPFDLPGTVITNNLTQSAQKSSDSLFNIVPGLDGNPNSVSLE
Sbjct: 746 AGQLDTQGATLKGTSVQIEPFDLPGTVITNNLTQSAQKSSDSLFNIVPGLDGNPNSVSLE 805
Query: 806 LGTKPGCFLVIGVDYSVGTKIQVSCKSSLPSINGIFEQAASFVQAAPLRQYHPISFIAKG 865
LGTKPGCFLVIGVDYSVGTKIQVSCKSSLPSINGIFEQAASFVQAAPLRQYHPISFIAKG
Sbjct: 806 LGTKPGCFLVIGVDYSVGTKIQVSCKSSLPSINGIFEQAASFVQAAPLRQYHPISFIAKG 865
Query: 866 VKRNFLLEPLYSLRDEFYTVYFNLGA 891
VKRNFLLEPLYSLRDEFYTVYFNLGA
Sbjct: 866 VKRNFLLEPLYSLRDEFYTVYFNLGA 891
>Os06g0612900 Protein of unknown function DUF1680 family protein
Length = 717
Score = 995 bits (2573), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/721 (69%), Positives = 571/721 (79%), Gaps = 47/721 (6%)
Query: 214 MWASTHNDTLLAKMSSVVDALHDCQKKMGSGYLSAFPSEFFDRVESIKAVWAPYYTIHK- 272
MWASTHN TL KM++VVDALHDCQ G+GYLSAFP+EFFDR E+I+ VWAPYYTIHK
Sbjct: 1 MWASTHNGTLAGKMAAVVDALHDCQAAAGTGYLSAFPAEFFDRFEAIRPVWAPYYTIHKA 60
Query: 273 -------------------------IMQGLLDQYTVAGNSKALDLVVGMANYFSDRVKNV 307
IMQGLLDQ+TVAGN KAL +VV MA+YF+ RV++V
Sbjct: 61 RNATQSICISTMAMNLICSCKCLNEIMQGLLDQHTVAGNGKALGMVVAMADYFAGRVRSV 120
Query: 308 IQKYSIERHWASLNEESGGMNDVLYQLYTITNDQKHLTLAHLFDKPCFLGLLAVQADSIS 367
IQ+Y+IERHW SLNEE+GGMNDVLYQLYTIT DQ+HL LAHLFDKPCFLGLLAVQADS+S
Sbjct: 121 IQRYTIERHWTSLNEETGGMNDVLYQLYTITKDQRHLVLAHLFDKPCFLGLLAVQADSLS 180
Query: 368 GFHSNTHIPVVIGAQMRYEVTGDLLYKQIATFFMDTINSSHSYATGGTSAGEFWTNPKRL 427
GFH+NTHIPVVIG QMRYEVTGD LYK+IATFFMD +NSSHSYATGGTS EFW+NPK L
Sbjct: 181 GFHANTHIPVVIGGQMRYEVTGDPLYKEIATFFMDIVNSSHSYATGGTSVSEFWSNPKHL 240
Query: 428 ADTLSTENEESCTTYNMLKVSRNLFRWTKELSYADYYERALINGVLSIQRGTDPGVMIYM 487
A+ L+TE EESCTTYNMLKVSR+LFRWTKE++YADYYERALINGVLSIQRG DPGVMIYM
Sbjct: 241 AEALTTETEESCTTYNMLKVSRHLFRWTKEIAYADYYERALINGVLSIQRGRDPGVMIYM 300
Query: 488 LPQAPGRSKAVSYHGWGTKYDSFWCCYGTGIESFSKLGDSIYFEEKGDRPVLNIIQYIPS 547
LPQ PGRSKAVSYHGWGT+Y+SFWCCYGTGIESFSKLGDSIYFE+KGD+P L IIQYIPS
Sbjct: 301 LPQGPGRSKAVSYHGWGTQYNSFWCCYGTGIESFSKLGDSIYFEQKGDKPGLYIIQYIPS 360
Query: 548 AYNWKAAGLTVNQQLKPISSLDMFLQVSLSTS-AKTNGQSATLNVRIPSWTSANGAKATL 606
+NW+ AGLTV QQ+KP+SS D +LQVSLS S AKTNGQ ATLNVRIPSWTS NGAKATL
Sbjct: 361 TFNWRTAGLTVTQQVKPLSSSDQYLQVSLSISAAKTNGQYATLNVRIPSWTSMNGAKATL 420
Query: 607 NDNDLGLMSPGSFLSISKQWNS-DDHLSLQFPITLRTEAIKDDRPEYASLQAILFGPFVL 665
ND DL L SPG+FL+ISKQW+S DDHL LQFPI LRTEAIKDDRP+ ASL AILFGPF+L
Sbjct: 421 NDKDLQLASPGTFLTISKQWDSGDDHLLLQFPINLRTEAIKDDRPQVASLNAILFGPFLL 480
Query: 666 AGLSTGDWN-AEAGNTSAISDWISPVPSSYNSQLVTFTQESSGKTFVLSSANG-SLTMQE 723
AGL+TGDW+ G +A SDWI+PVP+SYNSQLVT TQES GKT +LS+ N SL M E
Sbjct: 481 AGLTTGDWDAKTGGAATAASDWITPVPASYNSQLVTLTQESGGKTMLLSTVNDTSLAMLE 540
Query: 724 RPT-VDGTDTAIHATFRVHPQDSAGQLDTQGAT--------LKGTSVQIEPFDLPGTVIT 774
RP GTD A+ ATFRV P S +L + LK + IEPF LPGT ++
Sbjct: 541 RPEGAGGTDAAVRATFRVVPPGSRAELRQRAGAGAGEGAARLKVAAATIEPFGLPGTAVS 600
Query: 775 NNL-TQSAQKSSDSLFNIVPGLDGNPNSVSLELGTKPGCFLVIGVDYSVGTKIQVSCKS- 832
N L A SS +LFN+ PGLDG P SVSLELG+KPGCFLV G G K+ V C++
Sbjct: 601 NGLAVVRAGNSSSTLFNVAPGLDGKPGSVSLELGSKPGCFLVAG----AGAKVHVGCRTR 656
Query: 833 --SLPSINGIFEQAASFVQAAPLRQYHPISFIAKGVKRNFLLEPLYSLRDEFYTVYFNLG 890
+ + FEQAASF QA PLR+YH ISF A GV+R+FLLEPL++LRDEFYT+YFNL
Sbjct: 657 GGAAAAAAAGFEQAASFAQAEPLRRYHAISFFASGVRRSFLLEPLFTLRDEFYTIYFNLA 716
Query: 891 A 891
A
Sbjct: 717 A 717
>Os06g0613000 Conserved hypothetical protein
Length = 279
Score = 212 bits (540), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 128/279 (45%), Positives = 160/279 (57%), Gaps = 38/279 (13%)
Query: 645 IKDDRPEYASLQAILFGPFVLAGLSTGDWNAEAGNTSAISDWISP--------------- 689
DDRPEY+S+QA+LFGP +LAGL+ G+ + N S + ++P
Sbjct: 2 FSDDRPEYSSIQAVLFGPHLLAGLTHGNQTVKTSNDS--NSGLTPGVWEVNATHAAAAVA 59
Query: 690 -----VPSSYNSQLVTFTQES----SGKTFVLSS--ANGSLTMQERPTVDGTDTAIHATF 738
V S NSQLVT TQ + FVLS A+G+LTMQE P V G+D +HATF
Sbjct: 60 VWVTPVSQSLNSQLVTLTQRDGDAQAAAAFVLSVSIADGALTMQESP-VAGSDACVHATF 118
Query: 739 RV-HPQDSAGQLDTQGATLKGTSVQIEPFDLPGTVITNNLTQSAQKSSDSLFNIVPGLDG 797
R H A +D L+G V +EPFD PG +T+ L+ + + FN V GLDG
Sbjct: 119 RAYHSPSGASAIDAATGRLQGRDVALEPFDRPGMAVTDALS-VGRPGPATRFNAVAGLDG 177
Query: 798 NPNSVSLELGTKPGCFLVIGVD-YSVGTKIQVSCKSSLPSING------IFEQAASFVQA 850
P +VSLEL T+PGCF+ Y G K QVSC+ + G F +AASF QA
Sbjct: 178 LPGTVSLELATRPGCFVAAPTTAYLAGAKAQVSCRKPTAAGGGEDDDDTAFRRAASFTQA 237
Query: 851 APLRQYHPISFIAKGVKRNFLLEPLYSLRDEFYTVYFNL 889
APLR YHP+SF A G RNFLLEPL SL+DEFYTVYFN+
Sbjct: 238 APLRLYHPLSFSATGTDRNFLLEPLQSLQDEFYTVYFNV 276
>Os06g0612950 Protein of unknown function DUF1680 family protein
Length = 198
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/131 (48%), Positives = 67/131 (51%), Gaps = 14/131 (10%)
Query: 82 TPTDESTWMSLMPRRLLASPVSSPRRDAFDWLMLYRNXXXXXXXXXXXXXXXXXXX---X 138
PTDE+ WM LMP L A+ S FDW MLYR+
Sbjct: 62 NPTDEAAWMDLMP--LAAASASE-----FDWAMLYRSLKGAAVAGDEGGGGGGGGFGFLE 114
Query: 139 XXXXHDVRLQ----PGTVYWQAQQTNLEYXXXXXXXXXXWSFRTQAGLPASGAPYGGWEG 194
HDVRL VY +AQQTNLEY WSFRTQAGLPA G PYGGWEG
Sbjct: 115 EVSLHDVRLDMDGGGDGVYGRAQQTNLEYLLLLEVDRLVWSFRTQAGLPAPGKPYGGWEG 174
Query: 195 PGVELRGHFVG 205
P VELRGHFVG
Sbjct: 175 PDVELRGHFVG 185
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.132 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 27,533,466
Number of extensions: 1082190
Number of successful extensions: 2536
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 2517
Number of HSP's successfully gapped: 4
Length of query: 891
Length of database: 17,035,801
Length adjustment: 110
Effective length of query: 781
Effective length of database: 11,292,261
Effective search space: 8819255841
Effective search space used: 8819255841
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 161 (66.6 bits)