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Os06g0612900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF1680 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.89 (0.0395) R2 : 0.736
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.85 (0.0986) R2dC : 0.503 R2C : 0.608
β3 : -2.3 (0.16) R2dE : 0.129 R2E : 0.228
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.125 (0.0838) R2dN8 : 0.00217 R2N8 : -0.00436
σ : 0.739
deviance : 252
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_____
C
peak time of C : 21.8
E
wheather : wind
threshold : 1.288
memory length : 253
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 3.43
open length of G : 1.23

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
239.47 0.727 9.88 0.641 2.8 -2.62 -1.18 1.72 -0.103 21.8 1.4 234 3.22 1.97
240.61 0.722 9.89 0.654 2.84 -2.44 -1.13 -- -0.0777 21.8 1.4 235 3.22 1.85
244.45 0.728 9.87 0.713 2.8 -2.67 -- 2.49 -0.103 21.8 1.443 234 3.24 2.01
244.03 0.728 9.87 0.702 2.83 -2.32 -- -- -0.0414 21.7 1.32 234 3.43 1.26
369.32 0.895 9.78 0.742 -- -2.46 -- 1.59 0.118 -- 8 501 3.02 2.33
332.95 0.855 9.86 0.419 3.27 -- -0.978 -- 0.0959 20.9 -- -- -- --
336.21 0.859 9.86 0.452 3.27 -- -- -- 0.0965 20.9 -- -- -- --
342.12 0.861 9.77 0.497 -- -2.51 -- -- 0.101 -- 19.51 586 1.73 3.77
252 0.739 9.89 -- 2.85 -2.3 -- -- -0.125 21.8 1.288 253 3.43 1.23
947.48 1.44 9.77 0.453 -- -- -- -- 0.0743 -- -- -- -- --
341.6 0.865 9.87 -- 3.27 -- -- -- 0.0462 20.9 -- -- -- --
339.32 0.858 9.76 -- -- -2.83 -- -- 0.107 -- 38.07 586 1.02 4.95
952.9 1.44 9.78 -- -- -- -- -- 0.024 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 251.68 wind 3.0 90 < th dose dependent rect. 3 6
3 252.36 wind 1.0 270 < th dose independent rect. 3 2
5 255.31 humidity 90.0 270 > th dose independent rect. 1 5
7 256.58 wind 1.0 270 < th dose dependent rect. 4 1
10 257.00 humidity 90.0 270 > th dose dependent rect. 3 2
12 257.70 temperature 20.0 90 > th dose independent rect. 3 6
13 257.77 humidity 90.0 270 > th dose independent rect. 3 2
18 258.48 temperature 20.0 270 > th dose independent rect. 2 4
23 258.98 temperature 20.0 270 > th dose independent rect. 1 6
34 260.34 temperature 25.0 270 < th dose independent rect. 1 5
35 260.34 humidity 80.0 270 > th dose dependent rect. 1 5
39 260.71 radiation 1.0 270 < th dose dependent rect. 5 21
46 261.30 radiation 30.0 14400 < th dose independent rect. 16 13
55 261.67 wind 1.0 90 < th dose independent rect. 4 7
56 261.76 radiation 1.0 270 < th dose independent rect. 6 20
61 261.90 radiation 30.0 4320 < th dose independent rect. 7 1
62 261.92 radiation 20.0 4320 > th dose dependent rect. 6 2
80 262.17 temperature 25.0 270 < th dose independent rect. 3 2
81 262.25 radiation 30.0 4320 < th dose independent rect. 24 8
86 262.47 radiation 30.0 4320 > th dose independent rect. 7 1
106 262.66 radiation 30.0 14400 < th dose independent rect. 16 1
107 262.68 radiation 30.0 4320 < th dose independent rect. 19 13
111 262.77 wind 1.0 90 < th dose independent rect. 4 9
125 263.35 wind 1.0 90 > th dose independent rect. 23 15
147 264.01 temperature 10.0 270 > th dose dependent rect. 2 4
150 264.05 radiation 30.0 14400 < th dose independent rect. 16 5
161 264.39 humidity 50.0 90 > th dose dependent rect. 3 6
162 264.43 wind 1.0 90 < th dose dependent rect. 4 10
169 264.57 wind 1.0 90 < th dose dependent rect. 4 13
191 265.35 temperature 20.0 90 > th dose independent rect. 3 16
195 265.49 temperature 20.0 90 > th dose independent rect. 3 19
197 265.55 humidity 50.0 4320 < th dose dependent rect. 16 1
202 265.70 wind 1.0 90 < th dose independent rect. 4 13
203 265.72 radiation 10.0 1440 < th dose independent rect. 17 12
221 266.31 temperature 10.0 270 > th dose dependent rect. 1 6
228 266.54 precipitation 0.1 270 < th dose independent rect. 3 2
229 266.54 precipitation 0.1 270 < th dose dependent rect. 3 2
237 266.87 atmosphere 1015.0 270 < th dose dependent rect. 3 2
249 267.26 humidity 50.0 4320 < th dose independent rect. 16 1
259 267.43 radiation 10.0 1440 < th dose independent rect. 17 4
262 267.46 humidity 50.0 270 > th dose independent rect. 6 20
263 267.46 humidity 50.0 90 > th dose dependent rect. 9 18
265 267.48 wind 3.0 43200 > th dose independent rect. 2 13
273 267.60 temperature 10.0 90 > th dose dependent rect. 3 6
283 267.70 radiation 1.0 720 > th dose dependent rect. 18 11
284 267.71 radiation 1.0 10 < th dose dependent sin 12 NA
288 267.75 temperature 20.0 270 > th dose independent rect. 1 18
289 267.78 humidity 50.0 270 > th dose independent rect. 7 18
290 267.78 wind 1.0 43200 > th dose dependent rect. 23 17
295 267.94 wind 1.0 43200 > th dose dependent rect. 1 15
303 268.11 wind 3.0 43200 < th dose independent rect. 2 13
304 268.11 wind 5.0 43200 < th dose dependent rect. 2 13
318 268.27 wind 1.0 90 < th dose dependent rect. 4 21
321 268.29 wind 9.0 43200 < th dose dependent rect. 23 17
330 268.39 radiation 10.0 4320 > th dose dependent rect. 17 1
342 268.40 wind 3.0 43200 < th dose dependent rect. 9 2
343 268.40 radiation 1.0 270 < th dose dependent rect. 12 14
349 268.43 wind 9.0 270 < th dose independent rect. 5 22
351 268.46 humidity 60.0 14400 < th dose independent rect. 17 15
354 268.50 radiation 1.0 270 < th dose independent rect. 12 14
363 268.57 precipitation 0.1 270 < th dose independent rect. 2 4
364 268.57 precipitation 0.1 270 < th dose dependent rect. 2 4
369 268.62 humidity 60.0 14400 < th dose independent rect. 17 4
392 268.74 wind 3.0 43200 > th dose independent rect. 2 2
398 268.80 wind 3.0 43200 < th dose independent rect. 2 2
429 269.00 radiation 30.0 90 < th dose independent rect. 3 6
430 269.00 precipitation 0.1 270 < th dose independent rect. 1 6
433 269.00 precipitation 0.1 270 < th dose dependent rect. 1 6
440 269.04 precipitation 0.1 90 < th dose independent rect. 3 6
442 269.04 precipitation 0.1 90 < th dose dependent rect. 3 6
452 269.16 humidity 60.0 14400 > th dose independent rect. 17 12
454 269.16 humidity 70.0 14400 < th dose dependent rect. 18 14
461 269.21 wind 3.0 43200 > th dose independent sin 4 NA
466 269.22 wind 9.0 90 < th dose independent rect. 9 18
467 269.23 wind 1.0 43200 > th dose dependent sin 4 NA
469 269.25 wind 9.0 270 < th dose dependent rect. 1 6
473 269.27 humidity 60.0 14400 > th dose independent rect. 17 15
499 269.44 humidity 60.0 14400 > th dose independent rect. 17 4
503 269.45 wind 5.0 43200 < th dose dependent sin 4 NA
524 269.60 temperature 30.0 90 < th dose independent rect. 3 6
533 269.64 wind 9.0 43200 < th dose dependent sin 4 NA
542 269.68 wind 9.0 270 < th dose independent rect. 6 20
554 269.77 humidity 70.0 90 > th dose independent rect. 3 6
570 269.85 temperature 10.0 90 > th dose dependent rect. 3 19
576 269.89 wind 3.0 43200 < th dose independent sin 4 NA
590 269.98 temperature 10.0 270 > th dose dependent rect. 13 17
600 270.08 wind 9.0 270 < th dose independent rect. 7 18
607 270.14 wind 1.0 43200 > th dose independent rect. 8 2
614 270.17 wind 3.0 43200 > th dose independent rect. 2 5
622 270.19 radiation 20.0 1440 < th dose dependent rect. 18 11
666 270.45 wind 9.0 90 < th dose independent rect. 3 6
667 270.45 temperature 10.0 90 > th dose independent rect. 3 6
670 270.45 atmosphere 995.0 90 > th dose independent rect. 3 6
671 270.45 atmosphere 1015.0 90 < th dose independent rect. 3 6
672 270.45 temperature 10.0 90 > th dose independent rect. 9 18
687 270.48 atmosphere 1015.0 270 < th dose dependent rect. 2 4
711 270.64 wind 3.0 43200 < th dose independent rect. 2 5
713 270.65 temperature 20.0 270 > th dose independent rect. 13 18
721 270.71 temperature 10.0 270 > th dose dependent rect. 1 20
722 270.72 wind 3.0 43200 > th dose independent rect. 20 11
724 270.74 radiation 1.0 270 < th dose independent rect. 3 2
730 270.76 radiation 10.0 270 < th dose dependent rect. 3 2
733 270.77 wind 9.0 270 < th dose independent rect. 3 2
734 270.77 temperature 10.0 270 > th dose independent rect. 3 2
737 270.77 humidity 50.0 270 > th dose independent rect. 3 2
740 270.77 atmosphere 995.0 270 > th dose independent rect. 3 2
741 270.77 atmosphere 1010.0 270 < th dose independent rect. 3 2
746 270.77 temperature 10.0 270 > th dose independent rect. 5 22
755 270.81 wind 9.0 43200 > th dose independent rect. 20 18
765 270.87 radiation 10.0 270 < th dose independent rect. 2 4
769 270.89 wind 3.0 43200 < th dose independent rect. 20 10
793 271.00 wind 1.0 43200 < th dose independent rect. 8 2
847 271.25 radiation 20.0 270 < th dose independent rect. 1 6
862 271.33 humidity 70.0 270 > th dose independent rect. 1 6
870 271.35 wind 9.0 270 < th dose independent rect. 2 4
871 271.35 temperature 10.0 270 > th dose independent rect. 2 4
874 271.35 humidity 50.0 270 > th dose independent rect. 2 4
877 271.35 atmosphere 995.0 270 > th dose independent rect. 2 4
878 271.35 atmosphere 1015.0 270 < th dose independent rect. 2 4
882 271.35 temperature 10.0 270 > th dose independent rect. 6 20
919 271.54 temperature 10.0 270 > th dose independent rect. 1 6
922 271.54 humidity 50.0 270 > th dose independent rect. 1 6
924 271.54 atmosphere 995.0 270 > th dose independent rect. 1 6
925 271.54 atmosphere 1015.0 270 < th dose independent rect. 1 6
928 271.54 temperature 10.0 270 > th dose independent rect. 7 18
936 271.57 wind 9.0 270 < th dose independent rect. 1 6
945 271.58 radiation 40.0 14400 < th dose dependent rect. 18 10
956 271.63 humidity 70.0 14400 < th dose dependent rect. 17 5
991 271.73 humidity 50.0 90 > th dose independent rect. 9 18
993 271.73 radiation 40.0 270 < th dose dependent rect. 2 4
996 271.75 temperature 10.0 270 > th dose dependent rect. 12 9