Os02g0195500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1680 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0195500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF1680 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 39.78 | 0.296 | 9.96 | -1.11 | 0.985 | 0.778 | 0.504 | -0.792 | -0.242 | 22.8 | 16.08 | 547 | -- | -- |
| 40.23 | 0.295 | 9.94 | -0.979 | 0.983 | 0.783 | 0.391 | -- | -0.203 | 22.8 | 15.26 | 557 | -- | -- |
| 40.76 | 0.297 | 9.95 | -1.09 | 0.989 | 0.779 | -- | -0.539 | -0.233 | 22.8 | 16.01 | 526 | -- | -- |
| 40.95 | 0.298 | 9.94 | -0.987 | 0.981 | 0.781 | -- | -- | -0.201 | 22.8 | 15.3 | 559 | -- | -- |
| 88.73 | 0.439 | 9.93 | -1.11 | -- | 1.35 | -- | -0.208 | -0.296 | -- | 16.1 | 747 | -- | -- |
| 47.85 | 0.324 | 9.92 | -0.787 | 1.12 | -- | 0.447 | -- | -0.0822 | 22.2 | -- | -- | -- | -- |
| 48.64 | 0.327 | 9.92 | -0.805 | 1.12 | -- | -- | -- | -0.0832 | 22.2 | -- | -- | -- | -- |
| 88.51 | 0.438 | 9.94 | -1.17 | -- | 1.41 | -- | -- | -0.312 | -- | 16.07 | 760 | -- | -- |
| 64.03 | 0.373 | 9.91 | -- | 1.06 | 0.323 | -- | -- | -0.0371 | 22.4 | 17.09 | 469 | -- | -- |
| 124.39 | 0.521 | 9.89 | -0.788 | -- | -- | -- | -- | -0.0809 | -- | -- | -- | -- | -- |
| 65.7 | 0.379 | 9.9 | -- | 1.11 | -- | -- | -- | 0.00643 | 22.1 | -- | -- | -- | -- |
| 118.75 | 0.508 | 9.89 | -- | -- | 0.858 | -- | -- | -0.0568 | -- | 24.2 | 746 | -- | -- |
| 140.79 | 0.554 | 9.87 | -- | -- | -- | -- | -- | 0.0066 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 36.73 | temperature | 15 | 720 | > th | dose dependent | sin | 5 | NA |
| 3 | 36.78 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 3 |
| 4 | 36.78 | temperature | 15 | 720 | > th | dose dependent | rect. | 4 | 5 |
| 17 | 36.96 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 19 | 36.98 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 15 |
| 87 | 37.52 | temperature | 15 | 270 | > th | dose dependent | rect. | 4 | 15 |
| 246 | 38.24 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 15 |
| 273 | 38.37 | temperature | 30 | 720 | < th | dose dependent | sin | 7 | NA |
| 286 | 38.44 | temperature | 30 | 720 | < th | dose dependent | rect. | 2 | 10 |
| 293 | 38.46 | temperature | 30 | 720 | < th | dose dependent | sin | 4 | NA |
| 368 | 38.66 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 6 |
| 369 | 38.66 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 8 |
| 448 | 38.91 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 7 |
| 484 | 38.99 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 13 |
| 539 | 39.13 | temperature | 25 | 270 | < th | dose independent | rect. | 8 | 5 |
| 589 | 39.21 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 20 |
| 604 | 39.25 | temperature | 25 | 270 | < th | dose independent | rect. | 9 | 2 |
| 644 | 39.30 | temperature | 10 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 676 | 39.37 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 5 |
| 707 | 39.43 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 2 |
| 734 | 39.49 | temperature | 25 | 270 | > th | dose independent | rect. | 1 | 18 |
| 755 | 39.53 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 2 |
| 759 | 39.54 | temperature | 25 | 270 | > th | dose independent | rect. | 6 | 13 |
| 772 | 39.57 | temperature | 30 | 270 | < th | dose dependent | sin | 23 | NA |
| 808 | 39.63 | temperature | 15 | 30 | > th | dose dependent | rect. | 3 | 17 |
| 828 | 39.66 | temperature | 20 | 270 | > th | dose dependent | rect. | 12 | 23 |