Os06g0613000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0613000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 127.7 | 0.531 | 3.5 | 0.315 | 0.907 | -0.767 | 0.32 | -2.31 | 0.369 | 21.6 | 68.99 | 5285 | -- | -- |
| 134.41 | 0.54 | 3.5 | 0.384 | 0.927 | -0.919 | 0.11 | -- | 0.386 | 21.5 | 68.69 | 5228 | -- | -- |
| 128.06 | 0.527 | 3.5 | 0.305 | 0.902 | -0.767 | -- | -2.22 | 0.37 | 21.6 | 68.99 | 5306 | -- | -- |
| 134.45 | 0.54 | 3.5 | 0.38 | 0.928 | -0.916 | -- | -- | 0.387 | 21.5 | 68.62 | 5217 | -- | -- |
| 169.29 | 0.606 | 3.46 | 0.308 | -- | -0.763 | -- | -2.1 | 0.39 | -- | 68 | 5877 | -- | -- |
| 145.98 | 0.566 | 3.51 | 0.405 | 0.827 | -- | 0.0947 | -- | 0.346 | 21.5 | -- | -- | -- | -- |
| 146.02 | 0.566 | 3.51 | 0.401 | 0.826 | -- | -- | -- | 0.346 | 21.5 | -- | -- | -- | -- |
| 174.47 | 0.615 | 3.47 | 0.36 | -- | -0.893 | -- | -- | 0.397 | -- | 69 | 5881 | -- | -- |
| 136.92 | 0.545 | 3.49 | -- | 0.911 | -0.928 | -- | -- | 0.43 | 21.5 | 69.35 | 6703 | -- | -- |
| 186.16 | 0.638 | 3.48 | 0.406 | -- | -- | -- | -- | 0.344 | -- | -- | -- | -- | -- |
| 150.26 | 0.573 | 3.52 | -- | 0.827 | -- | -- | -- | 0.302 | 21.5 | -- | -- | -- | -- |
| 177.53 | 0.621 | 3.47 | -- | -- | -0.897 | -- | -- | 0.397 | -- | 69 | 7238 | -- | -- |
| 190.52 | 0.644 | 3.49 | -- | -- | -- | -- | -- | 0.299 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 126.28 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 7 | 4 |
| 10 | 126.92 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 5 |
| 16 | 127.12 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 6 |
| 25 | 127.29 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 33 | 127.36 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 10 | 2 |
| 39 | 127.43 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 9 | 4 |
| 44 | 127.47 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 19 | 18 |
| 82 | 127.85 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 10 | 1 |
| 98 | 127.99 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 19 | 18 |
| 129 | 128.18 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 3 | 10 |
| 130 | 128.18 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 24 | 13 |
| 157 | 128.26 | humidity | 70.0 | 4320 | < th | dose independent | sin | 6 | NA |
| 206 | 128.44 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 20 | 17 |
| 243 | 128.64 | humidity | 70.0 | 4320 | > th | dose independent | sin | 6 | NA |
| 247 | 128.65 | humidity | 80.0 | 4320 | < th | dose dependent | sin | 8 | NA |
| 370 | 128.98 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 5 | 6 |
| 431 | 129.18 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 15 | 22 |
| 653 | 129.63 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 654 | 129.63 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 656 | 129.63 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 691 | 129.72 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 693 | 129.72 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 2 |
| 702 | 129.73 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 15 | 21 |
| 742 | 129.83 | humidity | 70.0 | 4320 | < th | dose independent | no | NA | NA |
| 744 | 129.83 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 7 | 13 |