BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0179600 Os02g0179600|AK110418
(656 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0179600 Protein of unknown function T31B5_30_vWA famil... 1075 0.0
Os06g0652100 Protein of unknown function T31B5_30_vWA famil... 735 0.0
Os09g0499400 Conserved hypothetical protein 368 e-102
Os12g0141800 Conserved hypothetical protein 202 5e-52
Os09g0499500 Hypothetical protein 197 2e-50
>Os02g0179600 Protein of unknown function T31B5_30_vWA family protein
Length = 656
Score = 1075 bits (2779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 547/656 (83%), Positives = 547/656 (83%)
Query: 1 MAATAIATLLGXXXXXXXXXXXXXXXXTTTGDAFLDLMDANFNKPAPRKALTENLSPTFV 60
MAATAIATLLG TTTGDAFLDLMDANFNKPAPRKALTENLSPTFV
Sbjct: 1 MAATAIATLLGPPEARRPSAAVAAAPATTTGDAFLDLMDANFNKPAPRKALTENLSPTFV 60
Query: 61 SSGDACLDFFFHVVPGTPSXXXXXXXXXXXXXXXXXXXRLVANLRGVRGTGKSDREGFYA 120
SSGDACLDFFFHVVPGTPS RLVANLRGVRGTGKSDREGFYA
Sbjct: 61 SSGDACLDFFFHVVPGTPSAAVASLLAAAWGADPATALRLVANLRGVRGTGKSDREGFYA 120
Query: 121 AALWLHSHHPXXXXXXXXXXXXFGYLKDLPELLHRIVNGGLSTRKPGKKARLAAADXXXX 180
AALWLHSHHP FGYLKDLPELLHRIVNGGLSTRKPGKKARLAAAD
Sbjct: 121 AALWLHSHHPATLALNAASVAAFGYLKDLPELLHRIVNGGLSTRKPGKKARLAAADGIGF 180
Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXYHTSSRKQSRGVGSAEERIAASLERDGRLXXXXXX 240
YHTSSRKQSRGVGSAEERIAASLERDGRL
Sbjct: 181 IARRGRGRGRGRGCFRGRGRGFARGYHTSSRKQSRGVGSAEERIAASLERDGRLAAKAAV 240
Query: 241 XXXXXXXXXXXXXXXXYSRDPTYRSLHDRTADLFADLLRDDMRKLAEGNVHEFSLAAKWC 300
YSRDPTYRSLHDRTADLFADLLRDDMRKLAEGNVHEFSLAAKWC
Sbjct: 241 ERRCRRAEAAARAVERYSRDPTYRSLHDRTADLFADLLRDDMRKLAEGNVHEFSLAAKWC 300
Query: 301 PSLDKSYDRSTLLCEAIARRLFPKGSLPELAADLPDAHYAYRARERLRKAALVPLRRALK 360
PSLDKSYDRSTLLCEAIARRLFPKGSLPELAADLPDAHYAYRARERLRKAALVPLRRALK
Sbjct: 301 PSLDKSYDRSTLLCEAIARRLFPKGSLPELAADLPDAHYAYRARERLRKAALVPLRRALK 360
Query: 361 LPEVYISARAWESVVYTRVASVAMKNYKDLFLKHDADRFNAYLADVKSGKKKISAGALLP 420
LPEVYISARAWESVVYTRVASVAMKNYKDLFLKHDADRFNAYLADVKSGKKKISAGALLP
Sbjct: 361 LPEVYISARAWESVVYTRVASVAMKNYKDLFLKHDADRFNAYLADVKSGKKKISAGALLP 420
Query: 421 HQIIXXXXXXXXXXXVADLQWQRMVDDMRALGKLRNCVAVCDVSGSMTGLPMDVCVALGL 480
HQII VADLQWQRMVDDMRALGKLRNCVAVCDVSGSMTGLPMDVCVALGL
Sbjct: 421 HQIISSLDDDGGGSGVADLQWQRMVDDMRALGKLRNCVAVCDVSGSMTGLPMDVCVALGL 480
Query: 481 LVSDLSDDPWRGRVITFSESPQLHHIVGEALSDKARFIREMNWGMNTNFQAVFDKILEVA 540
LVSDLSDDPWRGRVITFSESPQLHHIVGEALSDKARFIREMNWGMNTNFQAVFDKILEVA
Sbjct: 481 LVSDLSDDPWRGRVITFSESPQLHHIVGEALSDKARFIREMNWGMNTNFQAVFDKILEVA 540
Query: 541 AGAALSPDKMVRRVVVFSDMEFDQASAQPWETDYEAIVRKYTAAGYGAAVPEVVFWNLRD 600
AGAALSPDKMVRRVVVFSDMEFDQASAQPWETDYEAIVRKYTAAGYGAAVPEVVFWNLRD
Sbjct: 541 AGAALSPDKMVRRVVVFSDMEFDQASAQPWETDYEAIVRKYTAAGYGAAVPEVVFWNLRD 600
Query: 601 SKAVPVTSGQKGVALVSGFSKNLLKLFLDGDGVVSPRAVMEKAISGPEYDKLVVFD 656
SKAVPVTSGQKGVALVSGFSKNLLKLFLDGDGVVSPRAVMEKAISGPEYDKLVVFD
Sbjct: 601 SKAVPVTSGQKGVALVSGFSKNLLKLFLDGDGVVSPRAVMEKAISGPEYDKLVVFD 656
>Os06g0652100 Protein of unknown function T31B5_30_vWA family protein
Length = 641
Score = 735 bits (1897), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/656 (58%), Positives = 442/656 (67%), Gaps = 39/656 (5%)
Query: 8 TLLGXXXXXXXXXXXXXXXXTTTGDAFLDLMDANFNKPAPR---KALTENLSPTFVSSGD 64
TLLG +TGD F+DL+D+N+NKP P K LTEN SPTF SSGD
Sbjct: 18 TLLGPPVERLRAAVSATAAAASTGDPFVDLLDSNYNKPKPTPPAKRLTENYSPTFASSGD 77
Query: 65 ACLDFFFHVVPGTPSXXXXXXXXXXXXXXXXXXXRLVANLRGVRGTGKSDREGFYAAALW 124
CLDFFF+VVP T + RL NLRGVRGTGKSD EGFYA ALW
Sbjct: 78 PCLDFFFNVVPDTHASTVTSLLSAAWTAEPNTALRLACNLRGVRGTGKSDHEGFYATALW 137
Query: 125 LHSHHPXXXXXXXXXXXXFGYLKDLPELLHRIVNGGLSTRKPGKKARLAAADXXXXXXXX 184
+H HHP FGYLKDLPELLHRI++GG+STR P AR +
Sbjct: 138 MHDHHPKTLALNAPSVAEFGYLKDLPELLHRIIHGGVSTRTP-PPARTRS---------- 186
Query: 185 XXXXXXXXXXXXXXXXXXXXXYHTS--SRKQSRGVGSAEERIAASLERDGRLXXXXXXXX 242
Y++S RK R + RIAAS E+ ++
Sbjct: 187 ---------------------YYSSRRPRKVRRDPATRAARIAASQEKHRKISDQAAVER 225
Query: 243 XXXXXXXXXXXXXXYSRDPTYRSLHDRTADLFADLLRDDMRKLAEGNVHEFSLAAKWCPS 302
Y+RDP YR LHDRTADLFADL+ DDMRKL +G V+ SLA+KWCPS
Sbjct: 226 RKKRAEAAARAVEMYARDPKYRFLHDRTADLFADLIADDMRKLEDGKVNNLSLASKWCPS 285
Query: 303 LDKSYDRSTLLCEAIARRLFPKGSLPELAADLPDAHYAYRARERLRKAALVPLRRALKLP 362
L K YDRSTLLCE+I RRLFPKGS EL DLPD +YAYR RERLRK ALVPLRRAL LP
Sbjct: 286 LYKCYDRSTLLCESIGRRLFPKGSDAELPEDLPDEYYAYRVRERLRKMALVPLRRALHLP 345
Query: 363 EVYISARAWESVVYTRVASVAMKNYKDLFLKHDADRFNAYLADVKSGKKKISAGALLPHQ 422
EVYISAR W VVY+RVASVAMKNY DLFL+HD +RFN +LA+VK+GK KI+AGALLPH
Sbjct: 346 EVYISARRWGDVVYSRVASVAMKNYTDLFLEHDHERFNLFLANVKTGKAKIAAGALLPHD 405
Query: 423 IIXXXXXXXXX-XXVADLQWQRMVDDMRALGKLRNCVAVCDVSGSMTGLPMDVCVALGLL 481
I+ VA+LQW+RMVDD+ LGKL NC+AVCDVSGSM G PMDVCVALGLL
Sbjct: 406 ILASVDSHDKEGNEVANLQWKRMVDDLLELGKLNNCLAVCDVSGSMNGRPMDVCVALGLL 465
Query: 482 VSDLSDDPWRGRVITFSESPQLHHIVGEALSDKARFIREMNWGMNTNFQAVFDKILEVAA 541
+S+L D+PW RVITFSE PQLHHI GE L +K FIREM WG NT+ QAVFD++L VA
Sbjct: 466 LSELCDEPWHHRVITFSERPQLHHIKGETLYEKEEFIREMEWGFNTDLQAVFDQLLHVAV 525
Query: 542 GAALSPDKMVRRVVVFSDMEFDQASAQPWETDYEAIVRKYTAAGYGAAVPEVVFWNLRDS 601
L P++MV++V VFSDMEFDQAS++ WETDYEAI RK+ AGYG A+PEVVFWNLRDS
Sbjct: 526 SGNLPPERMVKKVFVFSDMEFDQASSRAWETDYEAITRKFNEAGYGGAIPEVVFWNLRDS 585
Query: 602 KAVPVTSGQKGVALVSGFSKNLLKLFLDGD-GVVSPRAVMEKAISGPEYDKLVVFD 656
+VPVT +KGVALVSGFSKN+LKLFL G ++PRAVME+AISG EY+KLV+FD
Sbjct: 586 CSVPVTGNKKGVALVSGFSKNMLKLFLSGGYEKMTPRAVMERAISGREYEKLVMFD 641
>Os09g0499400 Conserved hypothetical protein
Length = 594
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/406 (48%), Positives = 259/406 (63%), Gaps = 11/406 (2%)
Query: 257 YSRDPTYRSLHDRTADLFADLLRDDMRKLAEGNVHEFSLAAKWCPSLDKSYDRSTLLCEA 316
Y D ++R L+D AD FA+LL+ D+ + G + LAAKWCPSL SYDR+TLLCEA
Sbjct: 194 YGSDVSFRFLYDGVADTFAELLKSDVEHMRAGENAKIGLAAKWCPSLRSSYDRATLLCEA 253
Query: 317 IARRLFPKGSLPELAADLPDAHYAYRARERLRKAALVPLRRALKLPEVYISARAWESVVY 376
IARR+FP+ S E L D HYAYR R RLR+ LVPLR+ L+LPEVY++A WE + Y
Sbjct: 254 IARRMFPRESSQEYLF-LSDEHYAYRVRNRLRREVLVPLRKVLELPEVYMTAGKWEQMPY 312
Query: 377 TRVASVAMKNYKDLFLKHDADRFNAYLADVKSGKKKISAGALLPHQIIXXXXXXXXXXXV 436
RV SVAM+ YK F KHD +L +V++G ++ GA +PH+++
Sbjct: 313 ARVPSVAMRQYKGAFEKHDKSGVAGFLDEVRTGHARLHVGAAMPHELV-AAALKGEHDEA 371
Query: 437 ADLQWQRMVDDMRALGKLRNCVAVCDVS--GSMTGLPMDVCVALGLLVSDLSDDPWRGRV 494
A+LQW+RMV + A G+L NC+AVC +S G + P VALGLL+S+LS DPW+GRV
Sbjct: 372 AELQWRRMVSALAAGGRLSNCIAVCGLSSGGDVAKPPGAAAVALGLLISELSQDPWKGRV 431
Query: 495 ITFSESPQLHHIVGEALSDKARF----IREMNWGMNTNFQAVFDKILEVAAGAALSPDKM 550
ITF + QLH + G L +K R +R G + N Q VFD+IL VA L+ D M
Sbjct: 432 ITFDATQQLHKVCGATLVEKLRSLAAPVRAAPKGSSLNLQGVFDRILTVATYGGLAKDMM 491
Query: 551 VRRVVVFSDMEFDQASAQPWETDYEAIVRKYTAAGYGAAVPEVVFWNLRDSKAVPVTSGQ 610
VRRV V SDME + ASA + + + I K+TA G+ A PEVVFWN+ + PV + +
Sbjct: 492 VRRVFVLSDMELN-ASAWRVQDELKTIRSKFTAEGFTA--PEVVFWNVGAPASAPVVATE 548
Query: 611 KGVALVSGFSKNLLKLFLDGDGVVSPRAVMEKAISGPEYDKLVVFD 656
A+VSG+SKNL++LFL+ DG ++P AVM AISGPEYD L V D
Sbjct: 549 ANAAVVSGYSKNLVRLFLEWDGQLTPAAVMADAISGPEYDSLEVVD 594
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Query: 55 LSPTFVSSGDACLDFFFHVVPG-TPSXXXXXXXXXXXXXXXXXXXRLVANLRGVRGTGKS 113
LS ++SGD CLDFFF +VPG T +LV +LR VRG GK+
Sbjct: 30 LSGRPLTSGDPCLDFFFQIVPGDTEVARVGDLLDAAWVRDPLTALKLVCHLRAVRGLGKA 89
Query: 114 DREGFYAAALWLHSHHPXXXXXXXXXXXXFGYLKDLPELLHRIVNG 159
DREGFYAAALW+H HHP FG KDL E+++R+++G
Sbjct: 90 DREGFYAAALWMHDHHPRTLAANLAAFAEFGCFKDLLEIVYRVLHG 135
>Os12g0141800 Conserved hypothetical protein
Length = 356
Score = 202 bits (515), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 122/356 (34%), Positives = 186/356 (52%), Gaps = 33/356 (9%)
Query: 334 LPDAHYAYRARERLRKAALVPLRRALKLPEVYISARAWESVVYTRVASVAMKNYKDLFLK 393
+ + HY + R RLR+ LVPLR+ L+LPE+Y+S W + Y RVAS AM+ Y+ LF K
Sbjct: 1 MKEKHYIFLVRRRLRREVLVPLRKDLELPEIYMSKNQWSDLPYERVASEAMRIYEHLFKK 60
Query: 394 HDADRFNAYLADVKSGKKKISAGAL-------LPHQIIXXXXXXXXXXXV-----ADLQW 441
HD RF A+L D K ++ A L II + A QW
Sbjct: 61 HDEGRFTAFLKDHKDSREAAKHKAKKAAPQPPLLQDIITSLGLASHASNIKRREDAAQQW 120
Query: 442 QRMVDDMRALGKLRNCVAVCDVSG-----SMTGLPMDVCVALGLLVSDLSDDPWRGRVIT 496
+ +VD +R G L NC+AVCDV+ S + +CV LG L+S+LS PW V
Sbjct: 121 RTLVDHLRGKGSLCNCMAVCDVNKGGLVKSEGQKLLKICVGLGFLISELSSPPWTNSVHA 180
Query: 497 FSESPQLHHIVGEALSDKARFIREMNWGMNTNFQAVFDKILEVAAGAALSPDKMVRRVVV 556
F+ + + + +K FIR+M N + VF+ I+ A + ++PD MV+ + +
Sbjct: 181 FASNYFPLVLPVGSYREKLNFIRQMPCEERFNLKKVFEGIITRAVTSGVTPDNMVKTIFI 240
Query: 557 FSDMEFDQAS----------------AQPWETDYEAIVRKYTAAGYGAAVPEVVFWNLRD 600
F+D F++AS ++PW +Y + ++ G+ VP++V WNL+
Sbjct: 241 FTDKFFEKASVRPVELIEHEDFNPLSSRPWHEEYRRVCEEFKRVGFQDVVPQIVLWNLKG 300
Query: 601 SKAVPVTSGQKGVALVSGFSKNLLKLFLDGDGVVSPRAVMEKAISGPEYDKLVVFD 656
++ +T+ + GV +SG+S L++LFL+ +GVV P M AI+G EY KL V D
Sbjct: 301 PRSAGLTATKDGVMTLSGYSDELMRLFLENNGVVEPEDEMLDAIAGDEYQKLQVID 356
>Os09g0499500 Hypothetical protein
Length = 132
Score = 197 bits (502), Expect = 2e-50, Method: Composition-based stats.
Identities = 92/132 (69%), Positives = 105/132 (79%)
Query: 525 MNTNFQAVFDKILEVAAGAALSPDKMVRRVVVFSDMEFDQASAQPWETDYEAIVRKYTAA 584
MNTNFQAVFD+IL A L P+KM+R V VFSDMEFD+AS WETDYE I RK+ +A
Sbjct: 1 MNTNFQAVFDQILRTAVDGRLPPEKMIRTVFVFSDMEFDEASTNHWETDYETICRKFGSA 60
Query: 585 GYGAAVPEVVFWNLRDSKAVPVTSGQKGVALVSGFSKNLLKLFLDGDGVVSPRAVMEKAI 644
GYG AVP++VFWNLRDS + PVTS Q GVA+VSGFSKNLLK+FL DGVV+P AVM AI
Sbjct: 61 GYGDAVPQIVFWNLRDSTSTPVTSTQPGVAMVSGFSKNLLKIFLQNDGVVNPEAVMAAAI 120
Query: 645 SGPEYDKLVVFD 656
+G EY KLVVFD
Sbjct: 121 AGEEYQKLVVFD 132
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.135 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 18,423,619
Number of extensions: 680975
Number of successful extensions: 1622
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 1604
Number of HSP's successfully gapped: 7
Length of query: 656
Length of database: 17,035,801
Length adjustment: 107
Effective length of query: 549
Effective length of database: 11,448,903
Effective search space: 6285447747
Effective search space used: 6285447747
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 159 (65.9 bits)