BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0115700 Os02g0115700|AK065094
(492 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0115700 Catalase isozyme A (EC 1.11.1.6) (CAT-A) 988 0.0
Os03g0131200 Similar to Catalase isozyme 2 (EC 1.11.1.6) 777 0.0
Os06g0727200 Catalase isozyme B (EC 1.11.1.6) (CAT-B) 744 0.0
AK068433 352 4e-97
D10425 139 4e-33
>Os02g0115700 Catalase isozyme A (EC 1.11.1.6) (CAT-A)
Length = 492
Score = 988 bits (2554), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/492 (96%), Positives = 477/492 (96%)
Query: 1 MDPCKFRPSSSFDTKTTTTNAGAPVWNDNEALTVGPRGPILLEDYHLIEKVAHFARERIP 60
MDPCKFRPSSSFDTKTTTTNAGAPVWNDNEALTVGPRGPILLEDYHLIEKVAHFARERIP
Sbjct: 1 MDPCKFRPSSSFDTKTTTTNAGAPVWNDNEALTVGPRGPILLEDYHLIEKVAHFARERIP 60
Query: 61 ERVVHARGASAKGFFECTHDVTDITCADFLRSPGAQTPVIVRFSTVIHERGSPETIRDPR 120
ERVVHARGASAKGFFECTHDVTDITCADFLRSPGAQTPVIVRFSTVIHERGSPETIRDPR
Sbjct: 61 ERVVHARGASAKGFFECTHDVTDITCADFLRSPGAQTPVIVRFSTVIHERGSPETIRDPR 120
Query: 121 GFAVKFYTREGNWDLLGNNFPVFFIRDGIKFPDVIHAFKPNPRSHVQEYWRVFDFLSHHP 180
GFAVKFYTREGNWDLLGNNFPVFFIRDGIKFPDVIHAFKPNPRSHVQEYWRVFDFLSHHP
Sbjct: 121 GFAVKFYTREGNWDLLGNNFPVFFIRDGIKFPDVIHAFKPNPRSHVQEYWRVFDFLSHHP 180
Query: 181 ESLHTFFFLFDDVGIPTDYRHMDGFGVNTYTFVTRDAKARYVKFHWKPTCGVSCLMDDEA 240
ESLHTFFFLFDDVGIPTDYRHMDGFGVNTYTFVTRDAKARYVKFHWKPTCGVSCLMDDEA
Sbjct: 181 ESLHTFFFLFDDVGIPTDYRHMDGFGVNTYTFVTRDAKARYVKFHWKPTCGVSCLMDDEA 240
Query: 241 TLVGGKNHSHATQDLYDSIAAGNFPEWKLFVQVIXXXXXXXXXXXXXXXTKTWPEDEVPL 300
TLVGGKNHSHATQDLYDSIAAGNFPEWKLFVQVI TKTWPEDEVPL
Sbjct: 241 TLVGGKNHSHATQDLYDSIAAGNFPEWKLFVQVIDPEEEERFDFDPLDDTKTWPEDEVPL 300
Query: 301 RPVGRLVLNRNVDNFFNENEQLAFGPGLVVPGIYYSDDKMLQCRVFAYADTQRYRLGPNY 360
RPVGRLVLNRNVDNFFNENEQLAFGPGLVVPGIYYSDDKMLQCRVFAYADTQRYRLGPNY
Sbjct: 301 RPVGRLVLNRNVDNFFNENEQLAFGPGLVVPGIYYSDDKMLQCRVFAYADTQRYRLGPNY 360
Query: 361 LMLPVNAPKCAHHNNHYDGAMNFMHRDEEVDYYPSRHAPLRHAPPTPITPRPVVGRRQKA 420
LMLPVNAPKCAHHNNHYDGAMNFMHRDEEVDYYPSRHAPLRHAPPTPITPRPVVGRRQKA
Sbjct: 361 LMLPVNAPKCAHHNNHYDGAMNFMHRDEEVDYYPSRHAPLRHAPPTPITPRPVVGRRQKA 420
Query: 421 TIHKQNDFKQPGERYRSWAPDRQERFIRRFAGELAHPKVSPELRAIWVNYLSQCDESLGV 480
TIHKQNDFKQPGERYRSWAPDRQERFIRRFAGELAHPKVSPELRAIWVNYLSQCDESLGV
Sbjct: 421 TIHKQNDFKQPGERYRSWAPDRQERFIRRFAGELAHPKVSPELRAIWVNYLSQCDESLGV 480
Query: 481 KIANRLNVKPSM 492
KIANRLNVKPSM
Sbjct: 481 KIANRLNVKPSM 492
>Os03g0131200 Similar to Catalase isozyme 2 (EC 1.11.1.6)
Length = 492
Score = 777 bits (2007), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/492 (73%), Positives = 417/492 (84%)
Query: 1 MDPCKFRPSSSFDTKTTTTNAGAPVWNDNEALTVGPRGPILLEDYHLIEKVAHFARERIP 60
MDP K RPSSSF+ +TN+GAPVWN+N +LTVG RGPILLEDYHL+EK+A+F RERIP
Sbjct: 1 MDPYKHRPSSSFNGPLWSTNSGAPVWNNNNSLTVGSRGPILLEDYHLVEKLANFDRERIP 60
Query: 61 ERVVHARGASAKGFFECTHDVTDITCADFLRSPGAQTPVIVRFSTVIHERGSPETIRDPR 120
ERVVHARGASAKGFFE THD+T +TCADFLR+PG QTPVIVRFSTVIHERGSPET+RDPR
Sbjct: 61 ERVVHARGASAKGFFEVTHDITHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPR 120
Query: 121 GFAVKFYTREGNWDLLGNNFPVFFIRDGIKFPDVIHAFKPNPRSHVQEYWRVFDFLSHHP 180
GFA+KFYTREGNWDL+GNNFPVFFIRDG+KFPD++H+ KPNP+SHVQE WR+ DF SHHP
Sbjct: 121 GFAIKFYTREGNWDLVGNNFPVFFIRDGMKFPDMVHSLKPNPKSHVQENWRILDFFSHHP 180
Query: 181 ESLHTFFFLFDDVGIPTDYRHMDGFGVNTYTFVTRDAKARYVKFHWKPTCGVSCLMDDEA 240
ESLH F FLFDD+GIP DYRHMDG GVNTYT V R K+ YVKFHWKPTCGV L+DDEA
Sbjct: 181 ESLHMFTFLFDDIGIPADYRHMDGSGVNTYTLVNRAGKSHYVKFHWKPTCGVKSLLDDEA 240
Query: 241 TLVGGKNHSHATQDLYDSIAAGNFPEWKLFVQVIXXXXXXXXXXXXXXXTKTWPEDEVPL 300
VGG NHSHATQDLYDSIAAGNFPEWKLF+Q I TKTWPED VPL
Sbjct: 241 VTVGGTNHSHATQDLYDSIAAGNFPEWKLFIQTIDPDHEDRFDFDPLDVTKTWPEDIVPL 300
Query: 301 RPVGRLVLNRNVDNFFNENEQLAFGPGLVVPGIYYSDDKMLQCRVFAYADTQRYRLGPNY 360
+PVGR+VLNRN+DNFF+ENEQLAF PG++VPGIYYSDDK+LQ R+F+Y+DTQR+RLGPNY
Sbjct: 301 QPVGRMVLNRNIDNFFSENEQLAFCPGIIVPGIYYSDDKLLQTRIFSYSDTQRHRLGPNY 360
Query: 361 LMLPVNAPKCAHHNNHYDGAMNFMHRDEEVDYYPSRHAPLRHAPPTPITPRPVVGRRQKA 420
L+LP NAPKCAHHNNHYDG MNFMHRDEEVDY+PSR+ P +HAP PI + GRR+K
Sbjct: 361 LLLPPNAPKCAHHNNHYDGFMNFMHRDEEVDYFPSRYDPAKHAPRYPIPSATLTGRREKV 420
Query: 421 TIHKQNDFKQPGERYRSWAPDRQERFIRRFAGELAHPKVSPELRAIWVNYLSQCDESLGV 480
I K+N+FKQPGERYRSW P RQ+RFI+R+ L+ P+++ E+R+IW++Y SQ D SLG
Sbjct: 421 VIAKENNFKQPGERYRSWDPARQDRFIKRWIDALSDPRLTHEIRSIWLSYWSQADRSLGQ 480
Query: 481 KIANRLNVKPSM 492
K+A+RL+ KPSM
Sbjct: 481 KLASRLSAKPSM 492
>Os06g0727200 Catalase isozyme B (EC 1.11.1.6) (CAT-B)
Length = 492
Score = 744 bits (1922), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/492 (69%), Positives = 412/492 (83%)
Query: 1 MDPCKFRPSSSFDTKTTTTNAGAPVWNDNEALTVGPRGPILLEDYHLIEKVAHFARERIP 60
MDP K RPSS ++ TTN+GAPVWN+N ALTVG RGPILLEDYHLIEK+A F RERIP
Sbjct: 1 MDPYKHRPSSGSNSTFWTTNSGAPVWNNNSALTVGERGPILLEDYHLIEKLAQFDRERIP 60
Query: 61 ERVVHARGASAKGFFECTHDVTDITCADFLRSPGAQTPVIVRFSTVIHERGSPETIRDPR 120
ERVVHARGASAKGFFE THD++ +TCADFLR+PG QTPVIVRFSTV+HERGSPET+RDPR
Sbjct: 61 ERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVIVRFSTVVHERGSPETLRDPR 120
Query: 121 GFAVKFYTREGNWDLLGNNFPVFFIRDGIKFPDVIHAFKPNPRSHVQEYWRVFDFLSHHP 180
GFAVKFYTREGN+DL+GNN PVFFIRDG+KFPD++HAFKP+P++++QE WR+ DF SHHP
Sbjct: 121 GFAVKFYTREGNFDLVGNNMPVFFIRDGMKFPDMVHAFKPSPKTNMQENWRIVDFFSHHP 180
Query: 181 ESLHTFFFLFDDVGIPTDYRHMDGFGVNTYTFVTRDAKARYVKFHWKPTCGVSCLMDDEA 240
ESLH F FLFDDVGIP +YRHM+GFGVNTYT + +D K VKFHWKPTCGV CL+DDEA
Sbjct: 181 ESLHMFSFLFDDVGIPLNYRHMEGFGVNTYTLINKDGKPHLVKFHWKPTCGVKCLLDDEA 240
Query: 241 TLVGGKNHSHATQDLYDSIAAGNFPEWKLFVQVIXXXXXXXXXXXXXXXTKTWPEDEVPL 300
VGG HSHAT+DL DSIAAGN+PEWKL++Q I TKTWPED +PL
Sbjct: 241 VTVGGTCHSHATKDLTDSIAAGNYPEWKLYIQTIDPDHEDRFDFDPLDVTKTWPEDIIPL 300
Query: 301 RPVGRLVLNRNVDNFFNENEQLAFGPGLVVPGIYYSDDKMLQCRVFAYADTQRYRLGPNY 360
+PVGR+VLN+N+DNFF ENEQLAF P ++VPGI+YSDDK+LQ R+F+YADTQR+RLGPNY
Sbjct: 301 QPVGRMVLNKNIDNFFAENEQLAFCPAIIVPGIHYSDDKLLQTRIFSYADTQRHRLGPNY 360
Query: 361 LMLPVNAPKCAHHNNHYDGAMNFMHRDEEVDYYPSRHAPLRHAPPTPITPRPVVGRRQKA 420
LMLPVNAPKCA+HNNH+DG+MNFMHRDEEV+Y+PSR RHA PI PR + G R+K
Sbjct: 361 LMLPVNAPKCAYHNNHHDGSMNFMHRDEEVNYFPSRFDAARHAEKVPIPPRVLTGCREKC 420
Query: 421 TIHKQNDFKQPGERYRSWAPDRQERFIRRFAGELAHPKVSPELRAIWVNYLSQCDESLGV 480
I K+N+F+Q GERYRS+ P RQ+RF++R+ L+ P+++ ELR IW++Y SQCD SLG
Sbjct: 421 VIDKENNFQQAGERYRSFDPARQDRFLQRWVDALSDPRITHELRGIWISYWSQCDASLGQ 480
Query: 481 KIANRLNVKPSM 492
K+A+RLN+KP+M
Sbjct: 481 KLASRLNLKPNM 492
>AK068433
Length = 222
Score = 352 bits (903), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 168/184 (91%), Positives = 169/184 (91%)
Query: 203 DGFGVNTYTFVTRDAKARYVKFHWKPTCGVSCLMDDEATLVGGKNHSHATQDLYDSIAAG 262
DGFGVNTYTFVTRDAKARYVKFHWKPTCGVSCLMDDEATLVGGKNHSHATQDLYDSIAAG
Sbjct: 36 DGFGVNTYTFVTRDAKARYVKFHWKPTCGVSCLMDDEATLVGGKNHSHATQDLYDSIAAG 95
Query: 263 NFPEWKLFVQVIXXXXXXXXXXXXXXXTKTWPEDEVPLRPVGRLVLNRNVDNFFNENEQL 322
NFPEWKLFVQVI TKTWPEDEVPLRPVGRLVLNRNVDNFFNENEQL
Sbjct: 96 NFPEWKLFVQVIDPEEEERFDFDPLDDTKTWPEDEVPLRPVGRLVLNRNVDNFFNENEQL 155
Query: 323 AFGPGLVVPGIYYSDDKMLQCRVFAYADTQRYRLGPNYLMLPVNAPKCAHHNNHYDGAMN 382
AFGPGLVVPGIYYSDDKMLQCRVFAYADTQRYRLGPNYLMLPVNAPKCAHHNNHYDGAMN
Sbjct: 156 AFGPGLVVPGIYYSDDKMLQCRVFAYADTQRYRLGPNYLMLPVNAPKCAHHNNHYDGAMN 215
Query: 383 FMHR 386
FMH+
Sbjct: 216 FMHQ 219
>D10425
Length = 170
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 66/90 (73%), Positives = 73/90 (81%)
Query: 1 MDPCKFRPSSSFDTKTTTTNAGAPVWNDNEALTVGPRGPILLEDYHLIEKVAHFARERIP 60
MDP K RPSS ++ TTN+GAPVWN+N ALTVG RGPILLEDYHLIEK+A F RERIP
Sbjct: 1 MDPYKHRPSSGSNSTFWTTNSGAPVWNNNSALTVGERGPILLEDYHLIEKLAQFDRERIP 60
Query: 61 ERVVHARGASAKGFFECTHDVTDITCADFL 90
ERVVHARGASAKGFFE THD++ CA F
Sbjct: 61 ERVVHARGASAKGFFEVTHDISHXKCAGFF 90
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.139 0.452
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 18,921,855
Number of extensions: 878804
Number of successful extensions: 1864
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 1862
Number of HSP's successfully gapped: 5
Length of query: 492
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 387
Effective length of database: 11,553,331
Effective search space: 4471139097
Effective search space used: 4471139097
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 158 (65.5 bits)