Os03g0131200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Catalase isozyme 2 (EC 1.11.1.6).
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Os03g0131200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Catalase isozyme 2 (EC 1.11.1.6).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 35.7 | 0.281 | 16.3 | 0.471 | 0.129 | -0.867 | -0.432 | -1.13 | 0.0518 | 18.2 | 10.03 | 4237 | -- | -- |
| 36.93 | 0.283 | 16.2 | 0.736 | 0.121 | -0.809 | -0.415 | -- | 0.122 | 17.8 | 9.733 | 4210 | -- | -- |
| 36.02 | 0.28 | 16.3 | 0.486 | 0.136 | -0.872 | -- | -1.08 | 0.0542 | 19.7 | 9.855 | 4158 | -- | -- |
| 37.13 | 0.284 | 16.2 | 0.732 | 0.138 | -0.827 | -- | -- | 0.121 | 19.6 | 9.919 | 4131 | -- | -- |
| 36.99 | 0.283 | 16.3 | 0.486 | -- | -0.878 | -- | -1.09 | 0.052 | -- | 10.03 | 4234 | -- | -- |
| 49.16 | 0.329 | 16.3 | 0.354 | 0.155 | -- | -0.43 | -- | -0.0393 | 17.8 | -- | -- | -- | -- |
| 49.6 | 0.33 | 16.3 | 0.356 | 0.153 | -- | -- | -- | -0.0412 | 18.2 | -- | -- | -- | -- |
| 38.12 | 0.288 | 16.2 | 0.735 | -- | -0.831 | -- | -- | 0.12 | -- | 10.99 | 4208 | -- | -- |
| 46.79 | 0.32 | 16.2 | -- | 0.316 | -0.761 | -- | -- | 0.00939 | 15.9 | 7.617 | 1998 | -- | -- |
| 50.81 | 0.333 | 16.2 | 0.352 | -- | -- | -- | -- | -0.0446 | -- | -- | -- | -- | -- |
| 52.94 | 0.34 | 16.3 | -- | 0.148 | -- | -- | -- | -0.0809 | 18.3 | -- | -- | -- | -- |
| 48.3 | 0.324 | 16.2 | -- | -- | -0.48 | -- | -- | -0.00589 | -- | 4.148 | 2771 | -- | -- |
| 54.08 | 0.343 | 16.3 | -- | -- | -- | -- | -- | -0.0836 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 33.47 | temperature | 30 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 2 | 33.49 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 3 | 33.50 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 8 |
| 115 | 34.09 | temperature | 25 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 116 | 34.09 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 7 |
| 188 | 34.26 | temperature | 25 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 305 | 34.45 | temperature | 25 | 4320 | < th | dose independent | sin | 13 | NA |
| 330 | 34.49 | temperature | 30 | 4320 | < th | dose dependent | sin | 12 | NA |
| 350 | 34.52 | temperature | 25 | 4320 | > th | dose independent | rect. | 16 | 11 |
| 371 | 34.55 | temperature | 10 | 4320 | > th | dose dependent | sin | 12 | NA |
| 634 | 34.89 | temperature | 25 | 4320 | > th | dose independent | sin | 14 | NA |
| 692 | 34.96 | temperature | 25 | 4320 | < th | dose independent | rect. | 23 | 1 |