Os06g0727200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Catalase isozyme B (EC 1.11.1.6) (CAT-B).
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Os06g0727200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Catalase isozyme B (EC 1.11.1.6) (CAT-B).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 39.08 | 0.294 | 12.2 | -0.121 | 1.41 | 0.527 | 0.825 | 0.868 | 0.221 | 17.7 | 1001 | 5730 | -- | -- |
| 39.47 | 0.293 | 12.2 | -0.09 | 1.41 | 0.532 | 0.817 | -- | 0.209 | 17.7 | 1000 | 5679 | -- | -- |
| 40.74 | 0.297 | 12.2 | -0.123 | 1.41 | 0.517 | -- | 0.855 | 0.223 | 17.8 | 1001 | 5726 | -- | -- |
| 41 | 0.298 | 12.2 | -0.0825 | 1.42 | 0.523 | -- | -- | 0.221 | 17.8 | 999.7 | 5761 | -- | -- |
| 144.53 | 0.56 | 12.2 | -0.184 | -- | 0.486 | -- | 1.13 | 0.193 | -- | 1001 | 6310 | -- | -- |
| 47.25 | 0.322 | 12.2 | -0.171 | 1.41 | -- | 0.851 | -- | 0.272 | 17.7 | -- | -- | -- | -- |
| 49.01 | 0.328 | 12.2 | -0.177 | 1.41 | -- | -- | -- | 0.275 | 17.8 | -- | -- | -- | -- |
| 144.98 | 0.561 | 12.2 | -0.13 | -- | 0.519 | -- | -- | 0.191 | -- | 999.7 | 5473 | -- | -- |
| 41.17 | 0.299 | 12.2 | -- | 1.42 | 0.536 | -- | -- | 0.229 | 17.8 | 999.7 | 5752 | -- | -- |
| 152.74 | 0.577 | 12.2 | -0.221 | -- | -- | -- | -- | 0.242 | -- | -- | -- | -- | -- |
| 49.83 | 0.33 | 12.2 | -- | 1.42 | -- | -- | -- | 0.295 | 17.8 | -- | -- | -- | -- |
| 145.39 | 0.562 | 12.2 | -- | -- | 0.541 | -- | -- | 0.202 | -- | 999.7 | 5473 | -- | -- |
| 154.03 | 0.579 | 12.1 | -- | -- | -- | -- | -- | 0.266 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 36.66 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 22 | 10 |
| 3 | 36.88 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 18 | 3 |
| 6 | 37.15 | wind | 9.0 | 4320 | < th | dose independent | rect. | 17 | 4 |
| 7 | 37.16 | wind | 9.0 | 4320 | > th | dose independent | rect. | 17 | 4 |
| 12 | 37.32 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 12 | 6 |
| 16 | 37.38 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 14 | 17 |
| 17 | 37.40 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 13 | 4 |
| 29 | 37.57 | wind | 7.0 | 4320 | > th | dose independent | rect. | 16 | 12 |
| 30 | 37.58 | wind | 7.0 | 4320 | < th | dose independent | rect. | 16 | 12 |
| 34 | 37.63 | wind | 7.0 | 4320 | < th | dose independent | rect. | 14 | 15 |
| 40 | 37.67 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 16 | 12 |
| 42 | 37.68 | wind | 7.0 | 4320 | > th | dose independent | rect. | 14 | 15 |
| 60 | 37.74 | wind | 7.0 | 4320 | < th | dose independent | rect. | 14 | 19 |
| 67 | 37.79 | wind | 7.0 | 4320 | > th | dose independent | rect. | 14 | 19 |
| 124 | 37.99 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 144 | 38.04 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 12 | 6 |
| 153 | 38.06 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 12 | 18 |
| 154 | 38.06 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 13 | 4 |
| 170 | 38.09 | wind | 7.0 | 4320 | > th | dose independent | sin | 14 | NA |
| 179 | 38.09 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 7 |
| 180 | 38.09 | wind | 5.0 | 1440 | > th | dose dependent | rect. | 14 | 9 |
| 184 | 38.10 | wind | 5.0 | 4320 | > th | dose dependent | sin | 14 | NA |
| 197 | 38.12 | temperature | 20.0 | 10 | > th | dose independent | rect. | 14 | 6 |
| 202 | 38.13 | wind | 7.0 | 4320 | < th | dose independent | sin | 14 | NA |
| 208 | 38.14 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 212 | 38.14 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 14 | 6 |
| 246 | 38.23 | humidity | 90.0 | 90 | < th | dose independent | rect. | 20 | 18 |
| 281 | 38.30 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 14 | 3 |
| 306 | 38.36 | humidity | 90.0 | 270 | < th | dose independent | rect. | 18 | 18 |
| 336 | 38.43 | wind | 7.0 | 4320 | < th | dose independent | rect. | 16 | 2 |
| 337 | 38.43 | humidity | 90.0 | 30 | < th | dose independent | rect. | 14 | 6 |
| 341 | 38.43 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 367 | 38.50 | temperature | 20.0 | 270 | > th | dose independent | rect. | 14 | 3 |
| 410 | 38.58 | humidity | 90.0 | 10 | < th | dose independent | rect. | 20 | 18 |
| 436 | 38.63 | wind | 7.0 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 438 | 38.63 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 14 | 6 |
| 481 | 38.70 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 14 | 19 |
| 488 | 38.71 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 20 | 6 |
| 493 | 38.71 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 14 | 6 |
| 503 | 38.73 | temperature | 20.0 | 270 | > th | dose independent | rect. | 12 | 6 |
| 504 | 38.73 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 20 | 8 |
| 537 | 38.77 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 20 | 18 |
| 546 | 38.77 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 20 | 18 |
| 560 | 38.80 | humidity | 80.0 | 270 | > th | dose independent | rect. | 23 | 9 |
| 578 | 38.83 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 581 | 38.83 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 608 | 38.88 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 21 |
| 616 | 38.88 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 21 |
| 656 | 38.94 | wind | 3.0 | 270 | > th | dose independent | rect. | 12 | 6 |
| 662 | 38.95 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 15 |
| 664 | 38.95 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 16 |
| 673 | 38.97 | humidity | 90.0 | 270 | < th | dose independent | rect. | 14 | 3 |
| 686 | 38.99 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 3 |
| 690 | 38.99 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 18 |
| 695 | 38.99 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 14 | 15 |
| 696 | 38.99 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 18 |
| 702 | 39.00 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 14 | 5 |
| 713 | 39.01 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 3 |
| 722 | 39.01 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 3 |
| 743 | 39.05 | humidity | 90.0 | 270 | < th | dose independent | rect. | 12 | 6 |
| 772 | 39.09 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 14 | 5 |
| 780 | 39.09 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 14 | 5 |
| 783 | 39.10 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 3 |
| 785 | 39.10 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 14 | 3 |
| 790 | 39.10 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 20 |
| 791 | 39.10 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 21 |
| 796 | 39.11 | wind | 1.0 | 270 | > th | dose independent | rect. | 14 | 3 |
| 807 | 39.12 | radiation | 10.0 | 270 | < th | dose independent | sin | 14 | NA |
| 820 | 39.13 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 6 |
| 823 | 39.13 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 6 |
| 854 | 39.17 | wind | 9.0 | 270 | < th | dose independent | rect. | 12 | 6 |
| 855 | 39.17 | radiation | 1.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 857 | 39.17 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 859 | 39.18 | radiation | 20.0 | 270 | > th | dose independent | rect. | 14 | 3 |
| 878 | 39.18 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 7 | 14 |
| 881 | 39.19 | wind | 9.0 | 10 | < th | dose independent | rect. | 14 | 6 |
| 899 | 39.20 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 5 | 11 |
| 900 | 39.20 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 4 | 12 |
| 927 | 39.22 | radiation | 30.0 | 270 | < th | dose dependent | sin | 14 | NA |
| 929 | 39.23 | radiation | 40.0 | 10 | < th | dose independent | rect. | 14 | 6 |
| 931 | 39.23 | temperature | 25.0 | 270 | < th | dose independent | rect. | 22 | 9 |
| 947 | 39.24 | humidity | 90.0 | 10 | < th | dose independent | rect. | 20 | 20 |
| 967 | 39.26 | humidity | 50.0 | 270 | > th | dose independent | rect. | 8 | 14 |
| 972 | 39.27 | atmosphere | 995.0 | 14400 | > th | dose independent | sin | 2 | NA |
| 980 | 39.27 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 5 | 12 |
| 996 | 39.29 | wind | 1.0 | 90 | > th | dose independent | rect. | 14 | 5 |