BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0103800 Os02g0103800|AK106213
(350 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0103800 Similar to Ferredoxin NADP+ reductase (EC 1.18... 640 0.0
Os06g0107700 Ferredoxin--NADP reductase, leaf isozyme, chlo... 521 e-148
Os03g0784700 Ferredoxin--NADP reductase, root isozyme, chlo... 272 3e-73
Os07g0147900 Similar to Ferredoxin-NADP reductase precursor... 271 6e-73
Os08g0243500 Similar to NADPH-cytochrome P450 oxydoreductas... 78 8e-15
Os09g0558900 Similar to NADPH-cytochrome P450 reductase (Fr... 76 3e-14
Os12g0275301 71 1e-12
>Os02g0103800 Similar to Ferredoxin NADP+ reductase (EC 1.18.1.2) (Fragment)
Length = 350
Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/350 (89%), Positives = 313/350 (89%)
Query: 1 MAAVNTVSSLPCSKXXXXXXXXXPRPSTCSVFYPPRCWSKRSSGNGVRXXXXXXXXXXXX 60
MAAVNTVSSLPCSK PRPSTCSVFYPPRCWSKRSSGNGVR
Sbjct: 1 MAAVNTVSSLPCSKAGAAVAGGAPRPSTCSVFYPPRCWSKRSSGNGVRAQASTTETTAAP 60
Query: 61 XXXXXXXXXXXXXXXXDGVVTNKYRPKEPYTGRCLLNTRITGDDAPGETWHMVFSTDGEI 120
DGVVTNKYRPKEPYTGRCLLNTRITGDDAPGETWHMVFSTDGEI
Sbjct: 61 AAEVTTKVEKVSKKQVDGVVTNKYRPKEPYTGRCLLNTRITGDDAPGETWHMVFSTDGEI 120
Query: 121 PYREGQSIGVIPDGIDKNGKPHKLRLYSIASSAIGDFADSKTVSLCVKRLVYTNDQGEIV 180
PYREGQSIGVIPDGIDKNGKPHKLRLYSIASSAIGDFADSKTVSLCVKRLVYTNDQGEIV
Sbjct: 121 PYREGQSIGVIPDGIDKNGKPHKLRLYSIASSAIGDFADSKTVSLCVKRLVYTNDQGEIV 180
Query: 181 KGVCSNFLCDLKPGSDVKITGPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEE 240
KGVCSNFLCDLKPGSDVKITGPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEE
Sbjct: 181 KGVCSNFLCDLKPGSDVKITGPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEE 240
Query: 241 HDDYKFNGLAWLFLGVPTSSTLLYREEFERMKETNAAGEKMYIQTRMAEYKDELWELLKK 300
HDDYKFNGLAWLFLGVPTSSTLLYREEFERMKETNAAGEKMYIQTRMAEYKDELWELLKK
Sbjct: 241 HDDYKFNGLAWLFLGVPTSSTLLYREEFERMKETNAAGEKMYIQTRMAEYKDELWELLKK 300
Query: 301 DNTYVYMCGLKGMEKGIDDIMIDLAAKDGIDWLDYKKQLKKSEQWNVEVY 350
DNTYVYMCGLKGMEKGIDDIMIDLAAKDGIDWLDYKKQLKKSEQWNVEVY
Sbjct: 301 DNTYVYMCGLKGMEKGIDDIMIDLAAKDGIDWLDYKKQLKKSEQWNVEVY 350
>Os06g0107700 Ferredoxin--NADP reductase, leaf isozyme, chloroplast precursor (EC
1.18.1.2) (FNR)
Length = 362
Score = 521 bits (1343), Expect = e-148, Method: Compositional matrix adjust.
Identities = 255/343 (74%), Positives = 277/343 (80%), Gaps = 18/343 (5%)
Query: 24 PRPSTCSVFYPPRCWSKRSSGNGVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGVVTNK 83
P P+ C + PPR ++ + G+ +GVVTNK
Sbjct: 22 PSPAHCFLPCPPR--TRAAHQRGLLLRAQVSTTDAAAVAAAPAKKEKISKKHDEGVVTNK 79
Query: 84 YRPKEPYTGRCLLNTRITGDDAPGETWHMVFSTDGEIPYREGQSIGVIPDGIDKNGKPHK 143
YRPKEPY G+CLLNT+IT DDAPGETWHMVFST+GEIPYREGQSIGVI DG+DKNGKPHK
Sbjct: 80 YRPKEPYVGKCLLNTKITADDAPGETWHMVFSTEGEIPYREGQSIGVIADGVDKNGKPHK 139
Query: 144 LRLYSIASSAIGDFADSKTVSLCVKRLVYTNDQGEIVKGVCSNFLCDLKPGSDVKITGPV 203
LRLYSIASSA+GDF DSKTVSLCVKRLVYTNDQGEIVKGVCSNFLCDLKPGSDVKITGPV
Sbjct: 140 LRLYSIASSALGDFGDSKTVSLCVKRLVYTNDQGEIVKGVCSNFLCDLKPGSDVKITGPV 199
Query: 204 GKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEEHDDYKFNGLAWLFLGVPTSSTLL 263
GKEMLMPKDPNA IIML TGTGIAPFRSFLWKMFFE++DDYKFNGLAWLFLGVPTSS+LL
Sbjct: 200 GKEMLMPKDPNANIIMLATGTGIAPFRSFLWKMFFEKYDDYKFNGLAWLFLGVPTSSSLL 259
Query: 264 YREEFERMK----------------ETNAAGEKMYIQTRMAEYKDELWELLKKDNTYVYM 307
Y+EEF++MK +TNA GEKMYIQTRMAEYK+ELWELLKKD+TYVYM
Sbjct: 260 YKEEFDKMKAKAPENFRVDYAVSREQTNAQGEKMYIQTRMAEYKEELWELLKKDHTYVYM 319
Query: 308 CGLKGMEKGIDDIMIDLAAKDGIDWLDYKKQLKKSEQWNVEVY 350
CGLKGMEKGIDDIM+ LAAKDGIDW DYKKQLKK EQWNVEVY
Sbjct: 320 CGLKGMEKGIDDIMVSLAAKDGIDWADYKKQLKKGEQWNVEVY 362
>Os03g0784700 Ferredoxin--NADP reductase, root isozyme, chloroplast precursor (EC
1.18.1.2) (FNR)
Length = 378
Score = 272 bits (695), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 145/293 (49%), Positives = 184/293 (62%), Gaps = 26/293 (8%)
Query: 82 NKYRPKEPYTGRCLLNTRITGDDAPGETWHMVFSTDGEIPYREGQSIGVIPDGID--KNG 139
N Y+PKEPYT + RI G APGET H+V G +PY EGQS G+IP G + K G
Sbjct: 88 NTYKPKEPYTATIVSVERIVGPKAPGETCHIVIDHGGNVPYWEGQSYGIIPPGENPKKPG 147
Query: 140 KPHKLRLYSIASSAIGDFADSKTVSLCVKRLVY----TNDQGEIVKGVCSNFLCDLKPGS 195
PH +RLYSIAS+ GD D +T SLCV+R VY T + GVCSNFLC+ KPG
Sbjct: 148 APHNVRLYSIASTRYGDSFDGRTTSLCVRRAVYYDPETGKEDPSKNGVCSNFLCNSKPGD 207
Query: 196 DVKITGPVGKEMLMPK-DPNATIIMLGTGTGIAPFRSFLWKMFFEEHDDYKFNGLAWLFL 254
VK+TGP GK ML+P+ DPNAT IM+ TGTG+APFR +L +MF E+ Y+F GLAWLFL
Sbjct: 208 KVKVTGPSGKIMLLPEEDPNATHIMIATGTGVAPFRGYLRRMFMEDVPKYRFGGLAWLFL 267
Query: 255 GVPTSSTLLYREEF-----------------ERMKETNAAGEKMYIQTRMAEYKDELWEL 297
GV + +LLY EEF R ++ AG KMY+Q ++ EY DE+++L
Sbjct: 268 GVANTDSLLYDEEFTSYLKQYPDNFRYDKALSREQKNKNAG-KMYVQDKIEEYSDEIFKL 326
Query: 298 LKKDNTYVYMCGLKGMEKGIDDIMIDLAAKDGIDWLDYKKQLKKSEQWNVEVY 350
L ++Y CGLKGM GI D + +A + G W QLKK++QW+VEVY
Sbjct: 327 L-DGGAHIYFCGLKGMMPGIQDTLKKVAEQRGESWEQKLSQLKKNKQWHVEVY 378
>Os07g0147900 Similar to Ferredoxin-NADP reductase precursor (Fragment)
Length = 378
Score = 271 bits (692), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 144/292 (49%), Positives = 184/292 (63%), Gaps = 24/292 (8%)
Query: 82 NKYRPKEPYTGRCLLNTRITGDDAPGETWHMVFSTDGEIPYREGQSIGVIPDGID--KNG 139
N Y+PKEPYT + R+ G APGET H+V G +PY EGQS GVIP G + K G
Sbjct: 88 NLYKPKEPYTATIVSVERLVGPKAPGETCHIVIDHGGNVPYWEGQSYGVIPPGENPKKPG 147
Query: 140 KPHKLRLYSIASSAIGDFADSKTVSLCVKRLVY----TNDQGEIVKGVCSNFLCDLKPGS 195
P+ +RLYSIAS+ GD D KT SLCV+R VY T + KG+CSNFLCD KPG
Sbjct: 148 SPNTVRLYSIASTRYGDSFDGKTASLCVRRAVYYDPETGKEDPTKKGICSNFLCDSKPGD 207
Query: 196 DVKITGPVGKEMLMPKD-PNATIIMLGTGTGIAPFRSFLWKMFFEEHDDYKFNGLAWLFL 254
V+ITGP GK ML+P+D PNAT IM+ TGTG+AP+R +L +MF E+ +KF GLAWLFL
Sbjct: 208 KVQITGPSGKIMLLPEDDPNATHIMIATGTGVAPYRGYLRRMFMEDVPSFKFGGLAWLFL 267
Query: 255 GVPTSSTLLYREEFERM----------------KETNAAGEKMYIQTRMAEYKDELWELL 298
GV + +LLY EEF ++ N G KMY+Q ++ EY DE+++LL
Sbjct: 268 GVANTDSLLYDEEFTNYLQQYPDNFRYDKALSREQKNKNGGKMYVQDKIEEYSDEIFKLL 327
Query: 299 KKDNTYVYMCGLKGMEKGIDDIMIDLAAKDGIDWLDYKKQLKKSEQWNVEVY 350
++Y CGLKGM GI D + +A + G W QLKK++QW+VEVY
Sbjct: 328 -DGGAHIYFCGLKGMMPGIQDTLKRVAEQRGESWEQKLSQLKKNKQWHVEVY 378
>Os08g0243500 Similar to NADPH-cytochrome P450 oxydoreductase isoform 2
Length = 651
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 25/204 (12%)
Query: 145 RLYSIASSAIGDFADSKTVSLCVKRLVYTND-QGEIVKGVCSNFLCDLKPGSDVKIT--G 201
R YSI+SS A ++ C LV+ G + KGVCS ++ + P + K
Sbjct: 429 RYYSISSSP--SMAPTRIHVTCA--LVHEKTPAGRVHKGVCSTWIKNAIPSEETKDCSWA 484
Query: 202 PV---GKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEEHDDYKFNGLAWLFLGVPT 258
PV +P DP+ +IM+G GTG+APFR FL + ++ + G + F G
Sbjct: 485 PVFVRQSNFKLPADPSVPVIMIGPGTGLAPFRGFLQERLSQKQSGAEL-GRSVFFFGCRN 543
Query: 259 SST-LLYREEFERMKETNAAGE-----------KMYIQTRMAEYKDELWELLKKDNTYVY 306
S +Y +E E A E K Y+Q +M++ E+W+++ + Y+Y
Sbjct: 544 SKMDFIYEDELNTFLEEGALSELVLAFSREGPTKEYVQHKMSQKASEIWDMISQGG-YIY 602
Query: 307 MCG-LKGMEKGIDDIMIDLAAKDG 329
+CG KGM + + ++ + + G
Sbjct: 603 VCGDAKGMARDVHRVLHTIVQEQG 626
>Os09g0558900 Similar to NADPH-cytochrome P450 reductase (Fragment)
Length = 714
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 98/221 (44%), Gaps = 28/221 (12%)
Query: 128 IGVIPDGIDKNGKPHKLRLYSIASSAIGDFADSKTVSLCVKRLVY-TNDQGEIVKGVCSN 186
+GV I +P R YSI+SS ++ C LVY G I KGVCS
Sbjct: 478 LGVFFAAIAPRLQP---RYYSISSSP--RMTPTRIHVTCA--LVYGQTPTGRIHKGVCST 530
Query: 187 FLCDLKPGSDVKIT--GPV---GKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEEH 241
++ + P + + P+ +P DP IIM+G GTG+APFR FL + +
Sbjct: 531 WMKNSIPLEESQECSWAPIFVRQSNFKLPTDPTVPIIMIGPGTGLAPFRGFLQERLALKE 590
Query: 242 DDYKFNGLAWLFLGVPTSST-LLYREEFERMKETNAAGE-----------KMYIQTRMAE 289
+ G A LF G +Y +E ET A E K Y+Q +MAE
Sbjct: 591 TGVEL-GHAVLFFGCRNRKMDFIYEDELNNFVETGALSELIVAFSREGPSKEYVQHKMAE 649
Query: 290 YKDELWELLKKDNTYVYMCG-LKGMEKGIDDIMIDLAAKDG 329
E+W ++ + Y+Y+CG KGM + + + + + G
Sbjct: 650 KAPEIWSIISQGG-YIYVCGDAKGMARDVHRTLHTIVQEQG 689
>Os12g0275301
Length = 165
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/33 (96%), Positives = 32/33 (96%)
Query: 296 ELLKKDNTYVYMCGLKGMEKGIDDIMIDLAAKD 328
ELLKKDNTYVYMCGLKGMEKGIDDI IDLAAKD
Sbjct: 35 ELLKKDNTYVYMCGLKGMEKGIDDITIDLAAKD 67
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.137 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,931,642
Number of extensions: 499168
Number of successful extensions: 976
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 963
Number of HSP's successfully gapped: 7
Length of query: 350
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 248
Effective length of database: 11,709,973
Effective search space: 2904073304
Effective search space used: 2904073304
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 156 (64.7 bits)