Os09g0558900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to NADPH-cytochrome P450 reductase (Fragment).
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Os09g0558900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to NADPH-cytochrome P450 reductase (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 160.1 | 0.594 | 10.4 | -0.884 | 3.97 | -1.08 | 1.71 | -0.152 | -0.624 | 10 | 71.74 | 1300 | -- | -- |
| 160.14 | 0.589 | 10.4 | -0.909 | 3.97 | -1.09 | 1.7 | -- | -0.629 | 10 | 71.81 | 1299 | -- | -- |
| 171.33 | 0.61 | 10.4 | -0.863 | 3.96 | -1.07 | -- | 0.154 | -0.634 | 10 | 72 | 1296 | -- | -- |
| 170.55 | 0.608 | 10.4 | -0.827 | 3.94 | -1.09 | -- | -- | -0.612 | 10 | 73.56 | 1306 | -- | -- |
| 942.02 | 1.44 | 10.4 | -0.749 | -- | -1.26 | -- | -0.477 | -0.465 | -- | 73.72 | 1523 | -- | -- |
| 203.04 | 0.668 | 10.3 | -0.679 | 3.87 | -- | 1.52 | -- | -0.463 | 9.87 | -- | -- | -- | -- |
| 211.95 | 0.682 | 10.3 | -0.62 | 3.86 | -- | -- | -- | -0.46 | 9.88 | -- | -- | -- | -- |
| 943.35 | 1.44 | 10.4 | -0.764 | -- | -1.26 | -- | -- | -0.471 | -- | 73.56 | 1306 | -- | -- |
| 187.85 | 0.638 | 10.4 | -- | 3.92 | -0.964 | -- | -- | -0.511 | 10 | 73.72 | 1311 | -- | -- |
| 1104.98 | 1.55 | 10.4 | -0.663 | -- | -- | -- | -- | -0.459 | -- | -- | -- | -- | -- |
| 222.09 | 0.697 | 10.3 | -- | 3.86 | -- | -- | -- | -0.391 | 9.89 | -- | -- | -- | -- |
| 937.86 | 1.43 | 10.4 | -- | -- | -1.26 | -- | -- | -0.372 | -- | 82.93 | 3016 | -- | -- |
| 1116.56 | 1.56 | 10.4 | -- | -- | -- | -- | -- | -0.385 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 162.42 | humidity | 70 | 1440 | > th | dose independent | rect. | 12 | 22 |
| 3 | 162.80 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 9 |
| 6 | 163.14 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 21 |
| 8 | 163.17 | humidity | 70 | 1440 | < th | dose independent | rect. | 12 | 22 |
| 16 | 163.72 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 10 |
| 26 | 164.06 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 27 | 164.07 | humidity | 50 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 39 | 164.31 | humidity | 90 | 1440 | < th | dose dependent | rect. | 12 | 1 |
| 40 | 164.31 | humidity | 80 | 1440 | < th | dose dependent | rect. | 17 | 23 |
| 43 | 164.35 | humidity | 70 | 1440 | > th | dose independent | rect. | 2 | 18 |
| 61 | 164.38 | humidity | 70 | 1440 | < th | dose independent | rect. | 16 | 22 |
| 64 | 164.39 | radiation | 10 | 1440 | < th | dose dependent | sin | 21 | NA |
| 65 | 164.40 | humidity | 70 | 1440 | > th | dose independent | rect. | 6 | 14 |
| 79 | 164.41 | humidity | 70 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 82 | 164.42 | humidity | 70 | 1440 | > th | dose independent | no | NA | NA |
| 117 | 164.52 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 9 |
| 118 | 164.53 | humidity | 70 | 1440 | > th | dose independent | sin | 18 | NA |
| 126 | 164.55 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 131 | 164.59 | humidity | 80 | 1440 | < th | dose dependent | rect. | 6 | 15 |
| 138 | 164.61 | humidity | 80 | 1440 | < th | dose independent | sin | 1 | NA |
| 187 | 164.71 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 9 |
| 190 | 164.71 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 191 | 164.71 | humidity | 60 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 198 | 164.73 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 18 |
| 223 | 164.76 | radiation | 10 | 1440 | < th | dose dependent | rect. | 11 | 20 |
| 229 | 164.78 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 15 |
| 303 | 165.06 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 11 |
| 310 | 165.08 | humidity | 90 | 1440 | < th | dose dependent | sin | 0 | NA |
| 339 | 165.14 | humidity | 80 | 1440 | > th | dose independent | sin | 1 | NA |
| 343 | 165.15 | humidity | 70 | 1440 | < th | dose independent | sin | 18 | NA |
| 345 | 165.15 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 19 |
| 393 | 165.32 | humidity | 70 | 1440 | < th | dose independent | no | NA | NA |
| 497 | 165.43 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 10 |
| 498 | 165.44 | humidity | 70 | 1440 | < th | dose independent | rect. | 12 | 8 |
| 526 | 165.50 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 14 |
| 567 | 165.58 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 22 |
| 591 | 165.67 | humidity | 70 | 1440 | > th | dose independent | sin | 11 | NA |
| 781 | 166.12 | humidity | 50 | 1440 | > th | dose dependent | sin | 23 | NA |
| 815 | 166.20 | humidity | 50 | 1440 | > th | dose dependent | rect. | 3 | 18 |
| 847 | 166.29 | humidity | 50 | 1440 | > th | dose dependent | rect. | 8 | 13 |
| 860 | 166.33 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 10 |
| 902 | 166.43 | humidity | 70 | 720 | > th | dose dependent | rect. | 18 | 3 |
| 934 | 166.48 | humidity | 50 | 720 | > th | dose dependent | rect. | 17 | 10 |
| 968 | 166.57 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 1 |