BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0957000 Os01g0957000|AK099730
(532 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0957000 ATP-NAD/AcoX kinase family protein 1006 0.0
Os11g0191400 ATP-NAD/AcoX kinase family protein 276 3e-74
Os05g0388400 ATP-NAD/AcoX kinase family protein 204 1e-52
>Os01g0957000 ATP-NAD/AcoX kinase family protein
Length = 532
Score = 1006 bits (2602), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/532 (92%), Positives = 491/532 (92%)
Query: 1 MSLDELPHKVSDERVNHDTVTSHXXXXXXXXXXXXXXXXXXXXXXKAAYEFLAQTPIKST 60
MSLDELPHKVSDERVNHDTVTSH KAAYEFLAQTPIKST
Sbjct: 1 MSLDELPHKVSDERVNHDTVTSHESEIGSGSISTVSSTVSSVESEKAAYEFLAQTPIKST 60
Query: 61 DAHLVEFSEAMRTVAKALXXXXXXXXXXXXXXXXXXXKYELEMAHKQQRKIKGYGSCANN 120
DAHLVEFSEAMRTVAKAL KYELEMAHKQQRKIKGYGSCANN
Sbjct: 61 DAHLVEFSEAMRTVAKALRRVAEGKAAAQAEAEEWRRKYELEMAHKQQRKIKGYGSCANN 120
Query: 121 ELEKLASQLTLETPASDQAGCCGNHGICSHEVLQDESPGPNPRSSHKLVSRKASFRLSWG 180
ELEKLASQLTLETPASDQAGCCGNHGICSHEVLQDESPGPNPRSSHKLVSRKASFRLSWG
Sbjct: 121 ELEKLASQLTLETPASDQAGCCGNHGICSHEVLQDESPGPNPRSSHKLVSRKASFRLSWG 180
Query: 181 CNGDKNGQHKHDFVSFEKGDITTAERSNKQILLKWESSPQTVLFITKPNSNSVHVLCAEM 240
CNGDKNGQHKHDFVSFEKGDITTAERSNKQILLKWESSPQTVLFITKPNSNSVHVLCAEM
Sbjct: 181 CNGDKNGQHKHDFVSFEKGDITTAERSNKQILLKWESSPQTVLFITKPNSNSVHVLCAEM 240
Query: 241 VRWLKEHKKINVVVEPRVSKELLTEDSYYNFIQTWDDDEEKKMLHTKVDLIVTLGGDGTV 300
VRWLKEHKKINVVVEPRVSKELLTEDSYYNFIQTWDDDEEKKMLHTKVDLIVTLGGDGTV
Sbjct: 241 VRWLKEHKKINVVVEPRVSKELLTEDSYYNFIQTWDDDEEKKMLHTKVDLIVTLGGDGTV 300
Query: 301 LWAASLFKGPVPPVVAFSLGSLGFMTPFPSEQYRDCLDNVLNGPFSITLRNRLQCHVIRD 360
LWAASLFKGPVPPVVAFSLGSLGFMTPFPSEQYRDCLDNVLNGPFSITLRNRLQCHVIRD
Sbjct: 301 LWAASLFKGPVPPVVAFSLGSLGFMTPFPSEQYRDCLDNVLNGPFSITLRNRLQCHVIRD 360
Query: 361 AAKDELETEEPILVLNEVTIDRGISSYLTYLECYCDSSFVTCVQGDGLIISTTSGSTAYS 420
AAKDELETEEPILVLNEVTIDRGISSYLTYLECYCDSSFVTCVQGDGLIISTTSGSTAYS
Sbjct: 361 AAKDELETEEPILVLNEVTIDRGISSYLTYLECYCDSSFVTCVQGDGLIISTTSGSTAYS 420
Query: 421 LAAGGSMVHPQVPGILFTPICPHSLSFRPLILPEYVTLRVQVPHNSRGQAWASFDGKDRK 480
LAAGGSMVHPQVPGILFTPICPHSLSFRPLILPEYVTLRVQVPHNSRGQAWASFDGKDRK
Sbjct: 421 LAAGGSMVHPQVPGILFTPICPHSLSFRPLILPEYVTLRVQVPHNSRGQAWASFDGKDRK 480
Query: 481 LLSPGDALICSISPWPVPTACLVDSTTDFLRSIHEGLHWNLRKSQSFDGPRD 532
LLSPGDALICSISPWPVPTACLVDSTTDFLRSIHEGLHWNLRKSQSFDGPRD
Sbjct: 481 LLSPGDALICSISPWPVPTACLVDSTTDFLRSIHEGLHWNLRKSQSFDGPRD 532
>Os11g0191400 ATP-NAD/AcoX kinase family protein
Length = 981
Score = 276 bits (705), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 147/323 (45%), Positives = 209/323 (64%), Gaps = 10/323 (3%)
Query: 207 SNKQILLKWESSPQTVLFITKPNSNSVHVLCAEMVRWLKEHKKINVVVEPRVSKELLTED 266
S +Q +L W+S P+TVL + K + + E+ +L +K+NV+VEP V ++
Sbjct: 662 STQQQMLMWKSPPKTVLLLKKLG-DELMEEAKEVASFLHHQEKMNVLVEPDV-HDIFARI 719
Query: 267 SYYNFIQTWDDDEEKKMLHTKVDLIVTLGGDGTVLWAASLFKGPVPPVVAFSLGSLGFMT 326
Y F+QT+ ++ LH +VD + LGGDG +L A++LF+ VPPVV+F+LGSLGF+T
Sbjct: 720 PGYGFVQTFYT-QDTSDLHERVDFVACLGGDGVILHASNLFRTSVPPVVSFNLGSLGFLT 778
Query: 327 PFPSEQYRDCLDNVLNGPFS----ITLRNRLQCHVIRDAAKDELETEEPILVLNEVTIDR 382
E +R L V++G + ITLR RL+C + R+ + + VLNEV +DR
Sbjct: 779 SHNFEGFRQDLRAVIHGNNTLGVYITLRMRLRCEIFRNGKAMPGKVFD---VLNEVVVDR 835
Query: 383 GISSYLTYLECYCDSSFVTCVQGDGLIISTTSGSTAYSLAAGGSMVHPQVPGILFTPICP 442
G + YL+ +ECY + +T VQGDG+I++T +GSTAYS AAGGSMVHP VP +LFTPICP
Sbjct: 836 GSNPYLSKIECYEHNHLITKVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICP 895
Query: 443 HSLSFRPLILPEYVTLRVQVPHNSRGQAWASFDGKDRKLLSPGDALICSISPWPVPTACL 502
HSLSFRP+ILP+ L +++P ++R AW SFDGK R+ LS GD++ S+S P+PT
Sbjct: 896 HSLSFRPVILPDSARLELKIPDDARSNAWVSFDGKRRQQLSRGDSVQISMSQHPLPTVNK 955
Query: 503 VDSTTDFLRSIHEGLHWNLRKSQ 525
D T D+ RS+ L+WN R Q
Sbjct: 956 SDQTGDWFRSLIRCLNWNERLDQ 978
>Os05g0388400 ATP-NAD/AcoX kinase family protein
Length = 115
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 97/102 (95%), Positives = 97/102 (95%)
Query: 429 HPQVPGILFTPICPHSLSFRPLILPEYVTLRVQVPHNSRGQAWASFDGKDRKLLSPGDAL 488
H QVPGILFTPICPHSLSFRPLILPEYVTLRVQVP NSRGQAWASFDGK RK L PGDAL
Sbjct: 12 HAQVPGILFTPICPHSLSFRPLILPEYVTLRVQVPINSRGQAWASFDGKGRKQLGPGDAL 71
Query: 489 ICSISPWPVPTACLVDSTTDFLRSIHEGLHWNLRKSQSFDGP 530
ICSISPWPVPTACLVDSTTDFLRSIHEGLHWNLRKSQSFDGP
Sbjct: 72 ICSISPWPVPTACLVDSTTDFLRSIHEGLHWNLRKSQSFDGP 113
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.133 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 18,271,550
Number of extensions: 773733
Number of successful extensions: 1662
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 1655
Number of HSP's successfully gapped: 3
Length of query: 532
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 426
Effective length of database: 11,501,117
Effective search space: 4899475842
Effective search space used: 4899475842
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 158 (65.5 bits)