Os11g0191400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ATP-NAD/AcoX kinase family protein.
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Os11g0191400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ATP-NAD/AcoX kinase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 85.92 | 0.435 | 12.2 | 0.693 | 1.58 | -1.95 | -0.0547 | 2.65 | 0.428 | 4.21 | 22.16 | 142 | -- | -- |
| 90.12 | 0.442 | 12.2 | 0.277 | 1.58 | -1.7 | -0.456 | -- | 0.311 | 4.06 | 22.36 | 162 | -- | -- |
| 85.92 | 0.432 | 12.1 | 0.702 | 1.58 | -1.95 | -- | 2.7 | 0.431 | 4.22 | 22.14 | 140 | -- | -- |
| 90.89 | 0.444 | 12.2 | 0.232 | 1.63 | -1.7 | -- | -- | 0.289 | 4.12 | 22.1 | 159 | -- | -- |
| 166.49 | 0.601 | 12.1 | 1.35 | -- | -3.42 | -- | 5.94 | 0.689 | -- | 23.78 | 155 | -- | -- |
| 140.27 | 0.555 | 12.3 | -0.131 | 2.31 | -- | -0.152 | -- | 0.0169 | 4.09 | -- | -- | -- | -- |
| 140.34 | 0.555 | 12.3 | -0.13 | 2.31 | -- | -- | -- | 0.0177 | 4.09 | -- | -- | -- | -- |
| 178.73 | 0.623 | 12.2 | 0.461 | -- | -3.07 | -- | -- | 0.428 | -- | 23.76 | 155 | -- | -- |
| 92.21 | 0.447 | 12.2 | -- | 1.66 | -1.63 | -- | -- | 0.25 | 4.14 | 22.18 | 155 | -- | -- |
| 431.37 | 0.97 | 12.3 | -0.0358 | -- | -- | -- | -- | 0.0794 | -- | -- | -- | -- | -- |
| 140.78 | 0.555 | 12.3 | -- | 2.31 | -- | -- | -- | 0.0322 | 4.09 | -- | -- | -- | -- |
| 184.39 | 0.632 | 12.2 | -- | -- | -2.99 | -- | -- | 0.345 | -- | 23.99 | 154 | -- | -- |
| 431.4 | 0.969 | 12.3 | -- | -- | -- | -- | -- | 0.0834 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 73.93 | temperature | 20 | 90 | > th | dose dependent | rect. | 24 | 18 |
| 5 | 75.15 | temperature | 20 | 270 | > th | dose dependent | rect. | 21 | 20 |
| 7 | 75.72 | temperature | 10 | 270 | > th | dose dependent | rect. | 20 | 22 |
| 129 | 85.48 | temperature | 20 | 90 | > th | dose dependent | rect. | 11 | 23 |
| 161 | 86.88 | temperature | 20 | 90 | > th | dose dependent | sin | 21 | NA |
| 171 | 87.22 | temperature | 20 | 270 | > th | dose dependent | sin | 23 | NA |
| 180 | 87.40 | temperature | 10 | 270 | > th | dose dependent | sin | 23 | NA |
| 187 | 87.59 | temperature | 10 | 90 | > th | dose dependent | sin | 21 | NA |
| 236 | 88.67 | temperature | 20 | 90 | > th | dose dependent | no | NA | NA |
| 243 | 88.70 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 16 |
| 285 | 89.40 | temperature | 20 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 302 | 89.56 | temperature | 20 | 270 | > th | dose dependent | rect. | 11 | 5 |
| 453 | 91.64 | temperature | 30 | 270 | < th | dose dependent | sin | 23 | NA |
| 564 | 93.01 | temperature | 20 | 90 | > th | dose dependent | rect. | 13 | 5 |
| 603 | 93.41 | temperature | 25 | 90 | > th | dose dependent | rect. | 7 | 18 |
| 641 | 93.69 | temperature | 10 | 270 | > th | dose dependent | rect. | 11 | 15 |
| 655 | 93.78 | temperature | 30 | 90 | < th | dose independent | rect. | 17 | 22 |
| 801 | 95.02 | temperature | 20 | 270 | > th | dose dependent | rect. | 13 | 2 |
| 858 | 95.25 | temperature | 25 | 90 | > th | dose dependent | rect. | 11 | 14 |
| 963 | 95.70 | temperature | 30 | 30 | < th | dose independent | rect. | 18 | 20 |
| 972 | 95.79 | temperature | 20 | 1440 | > th | dose dependent | rect. | 7 | 2 |