BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os11g0191400 Os11g0191400|AK065215
         (981 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G21640.2  | chr1:7588726-7592669 FORWARD LENGTH=1000          1135   0.0  
AT3G21070.1  | chr3:7380434-7383874 REVERSE LENGTH=531            283   5e-76

>AT1G21640.2 | chr1:7588726-7592669 FORWARD LENGTH=1000
          Length = 999

 Score = 1135 bits (2936), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 581/959 (60%), Positives = 698/959 (72%), Gaps = 57/959 (5%)

Query: 53  FSSRIGLDSQNYHTRDLSQLLWVGPVPGDIAEIEAYCRIFRAAEQLHTAVMSALCDPETG 112
           FS  +GLDSQ   +RD S L W+GPVPGDIAE+EAYCRIFR+AE+LH A+M  LC+P TG
Sbjct: 68  FSPDLGLDSQAVKSRDTSNLPWIGPVPGDIAEVEAYCRIFRSAERLHGALMETLCNPVTG 127

Query: 113 ECPVRYDVQTEDLPVLEDKVAAVLGCMLALLNRGRKEVLSGRSGVASAFQGSEDSTMDK- 171
           EC V YD   E+ P+LEDK+ +VLGC+L+LLN+GRKE+LSGRS   ++F   +    ++ 
Sbjct: 128 ECRVPYDFSPEEKPLLEDKIVSVLGCILSLLNKGRKEILSGRSSSMNSFNLDDVGVAEES 187

Query: 172 IPPLALFRGDLKRCCESMQVALASYLVPSEARGLDIWRKLQRLKNACYDAGFPRADGHPC 231
           +PPLA+FRG++KRCCES+ +AL +YL P + R   +WRKLQ+LKN CYDAGFPR+D +PC
Sbjct: 188 LPPLAVFRGEMKRCCESLHIALENYLTPDDERSGIVWRKLQKLKNVCYDAGFPRSDNYPC 247

Query: 232 PTLFANWFPVYFSTVPDDSLSDELEVAFWRGGQVSEEGLEWLLLKGFKTIVDLREEDVKD 291
            TLFANW P+Y S   +D  S E E+AFWRGGQV++EGL+WL+  GFKTIVDLR E VKD
Sbjct: 248 QTLFANWDPIYSSNTKEDIDSYESEIAFWRGGQVTQEGLKWLIENGFKTIVDLRAEIVKD 307

Query: 292 DLYLSAIHEAVSLGKIEVVNLPVEIGTAPSAEQVQRFAEIVSDSAKKPIYLHSQEGISRT 351
             Y +A+ +A+SLGKI VV +P+++  AP AEQV+ FA IVSDS+K+PIY+HS+EG+ RT
Sbjct: 308 TFYQTALDDAISLGKITVVQIPIDVRMAPKAEQVELFASIVSDSSKRPIYVHSKEGVWRT 367

Query: 352 SAMVSRWKQYVTRAERLATQNRSLNGNGKHVRNDQTEQLTNSPGFSSEGSENGTPLESDR 411
           SAMVSRWKQY+TR     T+   ++   K     +T+      G ++  S  G P E   
Sbjct: 368 SAMVSRWKQYMTRP---ITKEIPVSEESKRREVSETKL-----GSNAVVSGKGVPDEQTD 419

Query: 412 TMEGETCDIDIETARHNLEITNSLPSEQSTEQGELHGTRTELQSNFRLESNPLKAQFPSC 471
            +  E  ++D  +A           S QS E G   G  +   S F + S+PLK+Q P  
Sbjct: 420 KV-SEINEVDSRSA-----------SSQSKESGRFEGDTS--ASEFNMVSDPLKSQVPPG 465

Query: 472 DVFSKKGMTDFFRSKKVYPKXXXXXXXXXXXXXXXXXKQSLSAEQNGAIDYEAAEFKVLK 531
           ++FS+K M+ F +SK + P                  + S +   NG    +    + L 
Sbjct: 466 NIFSRKEMSKFLKSKSIAP-AGYLTNPSKILGTVPTPQFSYTGVTNGNQIVDKDSIRRLA 524

Query: 532 SSNGASFDNDYILSVAS---GITNGKPSN------NGASTSVEDRE---METSVVTVDPR 579
            +  +   N  +L  +S      NGK SN      +  + S+ D        + + V P 
Sbjct: 525 ETGNS---NGTLLPTSSQSLDFGNGKFSNGNVHASDNTNKSISDNRGNGFSAAPIAVPP- 580

Query: 580 TSDTSNSNGNAPLGSQKSAERNGSLYVERE--KSDHVDGNMCASATGVVRLQSRRKAEMF 637
           + + S + G+  +   ++   N     +    ++  ++GNMCASATGVVR+QSR+KAEMF
Sbjct: 581 SDNLSRAVGSHSVRESQTQRNNSGSSSDSSDDEAGAIEGNMCASATGVVRVQSRKKAEMF 640

Query: 638 LVRTDGFSCTREKVTESSLAFTHPSTQQQMLMWKSPPKTVLLLKKLGDELMEEAKE---- 693
           LVRTDG SCTREKVTESSLAFTHPSTQQQML+WK+ PKTVLLLKKLG ELMEEAKE    
Sbjct: 641 LVRTDGVSCTREKVTESSLAFTHPSTQQQMLLWKTTPKTVLLLKKLGQELMEEAKEEVHE 700

Query: 694 ----------VASFLHHQEKMNVLVEPDVHDIFARIPGYGFVQTFYTQDTSDLHERVDFV 743
                      ASFL+HQE MNVLVEP+VHD+FARIPG+GFVQTFY QDTSDLHERVDFV
Sbjct: 701 KLLVFQICFQAASFLYHQENMNVLVEPEVHDVFARIPGFGFVQTFYIQDTSDLHERVDFV 760

Query: 744 ACLGGDGVILHASNLFRTSVPPVVSFNLGSLGFLTSHNFEGFRQDLRAVIHGNNTL-GVY 802
           ACLGGDGVILHASNLF+ +VPPVVSFNLGSLGFLTSH FE FRQDL+ VIHGNNTL GVY
Sbjct: 761 ACLGGDGVILHASNLFKGAVPPVVSFNLGSLGFLTSHPFEDFRQDLKRVIHGNNTLDGVY 820

Query: 803 ITLRMRLRCEIFRNGKAMPGKVFDVLNEVVVDRGSNPYLSKIECYEHNHLITKVQGDGVI 862
           ITLRMRLRCEI+R GKAMPGKVFDVLNE+VVDRGSNPYLSKIECYEH+ LITKVQGDGVI
Sbjct: 821 ITLRMRLRCEIYRKGKAMPGKVFDVLNEIVVDRGSNPYLSKIECYEHDRLITKVQGDGVI 880

Query: 863 VATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRPVILPDSARLELKIPDDARSN 922
           VATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRPVILPDSA+LELKIPDDARSN
Sbjct: 881 VATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRPVILPDSAKLELKIPDDARSN 940

Query: 923 AWVSFDGKRRQQLSRGDSVQISMSQHPLPTVNKSDQTGDWFRSLIRCLNWNERLDQKAL 981
           AWVSFDGKRRQQLSRGDSV+I MSQHPLPTVNKSDQTGDWFRSLIRCLNWNERLDQKAL
Sbjct: 941 AWVSFDGKRRQQLSRGDSVRIYMSQHPLPTVNKSDQTGDWFRSLIRCLNWNERLDQKAL 999



>AT3G21070.1 | chr3:7380434-7383874 REVERSE LENGTH=531
          Length = 530

 Score =  283 bits (723), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 148/331 (44%), Positives = 215/331 (64%), Gaps = 16/331 (4%)

Query: 662 STQQQMLMWKSPPKTVLLLKKLGDELMEE-AKEVASFLHHQEKMNVLVEPDV-HDIFARI 719
           S++Q  L W+S P+TVL++ K     +   + ++  +L  Q+ +N+ VEP V  ++ +  
Sbjct: 201 SSKQISLTWESDPQTVLIITKPNSTSVRVLSVDMVRWLRTQKGLNIYVEPRVKEELLSES 260

Query: 720 PGYGFVQTF-----YTQD--TSDLHERVDFVACLGGDGVILHASNLFRTSVPPVVSFNLG 772
             + FVQT+     Y  D   S LH +VD +  LGGDG +L A+++F+  VPP+V F++G
Sbjct: 261 SSFNFVQTWEDVMIYDADKEISLLHTKVDLLITLGGDGTVLWAASMFKGPVPPIVPFSMG 320

Query: 773 SLGFLTSHNFEGFRQDLRAVIHGNNTLGVYITLRMRLRCEIFRNGKAM---PGKVFDVLN 829
           SLGF+T  + E +R  L A++ G     + ITLR RL+C I R+       P +   VLN
Sbjct: 321 SLGFMTPFHSEQYRDCLEAILKG----PISITLRHRLQCHIIRDKATHEYEPEETMLVLN 376

Query: 830 EVVVDRGSNPYLSKIECYEHNHLITKVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCML 889
           EV +DRG + YL+ +ECY  N  +T VQGDG+I++T +GSTAYS AAGGSMVHP VP +L
Sbjct: 377 EVTIDRGISSYLTNLECYCDNSFVTCVQGDGLILSTTSGSTAYSLAAGGSMVHPQVPGIL 436

Query: 890 FTPICPHSLSFRPVILPDSARLELKIPDDARSNAWVSFDGKRRQQLSRGDSVQISMSQHP 949
           FTPICPHSLSFRP+ILP+   + +++P ++RS+AWVSFDGK R+QL  GD++  SM+  P
Sbjct: 437 FTPICPHSLSFRPLILPEHVTVRVQVPFNSRSSAWVSFDGKDRKQLEAGDALVCSMAPWP 496

Query: 950 LPTVNKSDQTGDWFRSLIRCLNWNERLDQKA 980
           + T  + + T D+ RS+   L+WN R  Q A
Sbjct: 497 VSTACQVESTNDFLRSIHDGLHWNLRKTQSA 527



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.317    0.132    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 20,443,662
Number of extensions: 876398
Number of successful extensions: 2474
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 2466
Number of HSP's successfully gapped: 3
Length of query: 981
Length of database: 11,106,569
Length adjustment: 108
Effective length of query: 873
Effective length of database: 8,145,641
Effective search space: 7111144593
Effective search space used: 7111144593
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 117 (49.7 bits)