Os01g0957000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ATP-NAD/AcoX kinase family protein.
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Os01g0957000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ATP-NAD/AcoX kinase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.22 | 0.236 | 11.2 | -0.126 | 1.25 | 0.0409 | 0.425 | 1.61 | -0.143 | 5.04 | 8.323 | 11038 | -- | -- |
| 27.1 | 0.244 | 11.3 | -0.479 | 1.19 | -0.296 | 0.389 | -- | -0.236 | 5.21 | 8.323 | 11038 | -- | -- |
| 25.67 | 0.236 | 11.2 | -0.123 | 1.25 | 0.048 | -- | 1.64 | -0.144 | 5.06 | 8.943 | 11141 | -- | -- |
| 27.48 | 0.246 | 11.3 | -0.474 | 1.19 | -0.322 | -- | -- | -0.234 | 5.24 | 8.323 | 11038 | -- | -- |
| 89.2 | 0.442 | 11.3 | -0.297 | -- | -1.24 | -- | -0.226 | -0.0904 | -- | 9.775 | 11323 | -- | -- |
| 27.93 | 0.248 | 11.3 | -0.536 | 1.25 | -- | 0.46 | -- | -0.277 | 5.03 | -- | -- | -- | -- |
| 28.47 | 0.25 | 11.3 | -0.537 | 1.26 | -- | -- | -- | -0.279 | 5.05 | -- | -- | -- | -- |
| 89.24 | 0.442 | 11.3 | -0.266 | -- | -1.24 | -- | -- | -0.0818 | -- | 9.775 | 11323 | -- | -- |
| 29.78 | 0.254 | 11.2 | -- | 1.26 | -0.403 | -- | -- | -0.0987 | 5.03 | 6.634 | 47520 | -- | -- |
| 111.42 | 0.493 | 11.3 | -0.491 | -- | -- | -- | -- | -0.247 | -- | -- | -- | -- | -- |
| 36.06 | 0.281 | 11.3 | -- | 1.25 | -- | -- | -- | -0.219 | 5.06 | -- | -- | -- | -- |
| 90.85 | 0.445 | 11.2 | -- | -- | -1.33 | -- | -- | -0.042 | -- | 5.73 | 47520 | -- | -- |
| 117.79 | 0.507 | 11.3 | -- | -- | -- | -- | -- | -0.192 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.30 | wind | 5 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 2 | 24.33 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 5 | 24.42 | humidity | 70 | 43200 | > th | dose dependent | rect. | 19 | 4 |
| 6 | 24.43 | humidity | 70 | 43200 | > th | dose dependent | rect. | 20 | 2 |
| 11 | 24.48 | wind | 3 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 16 | 24.53 | wind | 5 | 43200 | > th | dose independent | rect. | 17 | 18 |
| 17 | 24.53 | wind | 5 | 43200 | < th | dose independent | rect. | 17 | 18 |
| 22 | 24.55 | wind | 5 | 43200 | > th | dose independent | rect. | 18 | 16 |
| 23 | 24.55 | wind | 5 | 43200 | < th | dose independent | rect. | 18 | 16 |
| 33 | 24.57 | wind | 7 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 57 | 24.61 | wind | 3 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 65 | 24.62 | wind | 3 | 43200 | > th | dose dependent | rect. | 18 | 16 |
| 67 | 24.63 | wind | 7 | 43200 | > th | dose dependent | rect. | 19 | 9 |
| 72 | 24.64 | wind | 7 | 43200 | < th | dose independent | rect. | 19 | 9 |
| 83 | 24.65 | wind | 7 | 43200 | < th | dose independent | rect. | 20 | 6 |
| 86 | 24.65 | wind | 7 | 43200 | > th | dose independent | rect. | 19 | 9 |
| 96 | 24.66 | wind | 7 | 43200 | > th | dose independent | rect. | 20 | 6 |
| 122 | 24.67 | wind | 1 | 43200 | > th | dose dependent | rect. | 20 | 9 |
| 124 | 24.68 | wind | 5 | 43200 | > th | dose independent | sin | 11 | NA |
| 125 | 24.68 | wind | 5 | 43200 | < th | dose independent | sin | 11 | NA |
| 136 | 24.68 | wind | 9 | 43200 | < th | dose dependent | rect. | 20 | 9 |
| 155 | 24.69 | wind | 3 | 43200 | > th | dose dependent | sin | 10 | NA |
| 199 | 24.71 | wind | 7 | 43200 | < th | dose dependent | rect. | 23 | 5 |
| 261 | 24.74 | wind | 9 | 43200 | < th | dose dependent | rect. | 20 | 13 |
| 267 | 24.75 | radiation | 20 | 4320 | < th | dose independent | rect. | 17 | 13 |
| 307 | 24.76 | wind | 9 | 43200 | < th | dose dependent | sin | 9 | NA |
| 308 | 24.76 | wind | 5 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 327 | 24.77 | temperature | 20 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 381 | 24.78 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 1 | 14 |
| 390 | 24.78 | wind | 1 | 43200 | > th | dose dependent | rect. | 23 | 5 |
| 428 | 24.79 | humidity | 60 | 43200 | > th | dose dependent | sin | 16 | NA |
| 504 | 24.81 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 24 | 15 |
| 534 | 24.81 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 11 | 15 |
| 538 | 24.82 | wind | 5 | 43200 | > th | dose independent | sin | 4 | NA |
| 539 | 24.82 | wind | 5 | 43200 | < th | dose independent | sin | 4 | NA |
| 563 | 24.82 | wind | 7 | 43200 | < th | dose dependent | rect. | 3 | 9 |
| 600 | 24.83 | wind | 5 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 616 | 24.83 | atmosphere | 995 | 43200 | < th | dose dependent | sin | 17 | NA |
| 624 | 24.83 | wind | 7 | 43200 | < th | dose dependent | rect. | 3 | 7 |
| 644 | 24.83 | wind | 1 | 43200 | > th | dose dependent | rect. | 23 | 14 |
| 658 | 24.84 | atmosphere | 995 | 43200 | > th | dose independent | sin | 5 | NA |
| 677 | 24.84 | wind | 3 | 43200 | > th | dose dependent | sin | 5 | NA |
| 681 | 24.84 | humidity | 90 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 719 | 24.85 | temperature | 20 | 4320 | < th | dose independent | rect. | 17 | 2 |
| 742 | 24.85 | humidity | 90 | 43200 | < th | dose dependent | rect. | 19 | 3 |
| 752 | 24.85 | humidity | 90 | 43200 | < th | dose dependent | rect. | 18 | 5 |
| 774 | 24.86 | atmosphere | 995 | 43200 | < th | dose independent | sin | 5 | NA |
| 791 | 24.86 | wind | 3 | 43200 | < th | dose dependent | rect. | 3 | 3 |
| 840 | 24.87 | radiation | 20 | 4320 | < th | dose independent | rect. | 17 | 9 |
| 852 | 24.87 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 18 | 21 |
| 866 | 24.87 | humidity | 90 | 43200 | < th | dose dependent | rect. | 17 | 8 |
| 891 | 24.88 | wind | 5 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 992 | 24.89 | wind | 1 | 43200 | > th | dose dependent | rect. | 24 | 3 |