BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0933200 Os01g0933200|J065092L15
         (336 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os01g0933200  Heavy metal transport/detoxification protein d...   471   e-133
AK063326                                                          471   e-133
Os05g0368600  Heavy metal transport/detoxification protein d...   107   9e-24
Os05g0150700  Heavy metal transport/detoxification protein d...    80   2e-15
Os07g0671400  Heavy metal transport/detoxification protein d...    69   7e-12

>Os01g0933200 Heavy metal transport/detoxification protein domain containing
           protein
          Length = 336

 Score =  471 bits (1213), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 246/336 (73%), Positives = 246/336 (73%)

Query: 1   MASGSEPIECQVLVLRVSIHCEGCKKKVKKVLQHVPGVFRCDVDARSNKVIVTASRNMDA 60
           MASGSEPIECQVLVLRVSIHCEGCKKKVKKVLQHVPGVFRCDVDARSNKVIVTASRNMDA
Sbjct: 1   MASGSEPIECQVLVLRVSIHCEGCKKKVKKVLQHVPGVFRCDVDARSNKVIVTASRNMDA 60

Query: 61  NILVAKLRKSGXXXXXXXXXXXXXXXXXXXXXXXXXXTKNQSDESSKPSDQPAEKPGPDK 120
           NILVAKLRKSG                          TKNQSDESSKPSDQPAEKPGPDK
Sbjct: 61  NILVAKLRKSGKQAEPWPEEPKQQQPPPPPAESQSQETKNQSDESSKPSDQPAEKPGPDK 120

Query: 121 AEGSAAEPNNPQPSPEPTKSTDETPKPNQEIQEPSNAKANTDANASGNASDETKEAAATG 180
           AEGSAAEPNNPQPSPEPTKSTDETPKPNQEIQEPSNAKANTDANASGNASDETKEAAATG
Sbjct: 121 AEGSAAEPNNPQPSPEPTKSTDETPKPNQEIQEPSNAKANTDANASGNASDETKEAAATG 180

Query: 181 EQSSEPKGKVKQHRERPIDARVTMEYGGGSHVNYMPQPQPVPVMSYNVXXXXXXXXXXXX 240
           EQSSEPKGKVKQHRERPIDARVTMEYGGGSHVNYMPQPQPVPVMSYNV            
Sbjct: 181 EQSSEPKGKVKQHRERPIDARVTMEYGGGSHVNYMPQPQPVPVMSYNVARPTASAAYYAA 240

Query: 241 XXXXXXXXXXXXXXXXXXXXQGYIDEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA 300
                               QGYIDEE                                A
Sbjct: 241 PPAPAPMSMPMPMARPGPSSQGYIDEEYSPSYYNRSSPYEPYYYPQPSPYRYQHYQQSSA 300

Query: 301 DDYYYGAPQQRSAFSPPRDAYGEMFNDENSNSCSVM 336
           DDYYYGAPQQRSAFSPPRDAYGEMFNDENSNSCSVM
Sbjct: 301 DDYYYGAPQQRSAFSPPRDAYGEMFNDENSNSCSVM 336



>AK063326 
          Length = 336

 Score =  471 bits (1213), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 246/336 (73%), Positives = 246/336 (73%)

Query: 1   MASGSEPIECQVLVLRVSIHCEGCKKKVKKVLQHVPGVFRCDVDARSNKVIVTASRNMDA 60
           MASGSEPIECQVLVLRVSIHCEGCKKKVKKVLQHVPGVFRCDVDARSNKVIVTASRNMDA
Sbjct: 1   MASGSEPIECQVLVLRVSIHCEGCKKKVKKVLQHVPGVFRCDVDARSNKVIVTASRNMDA 60

Query: 61  NILVAKLRKSGXXXXXXXXXXXXXXXXXXXXXXXXXXTKNQSDESSKPSDQPAEKPGPDK 120
           NILVAKLRKSG                          TKNQSDESSKPSDQPAEKPGPDK
Sbjct: 61  NILVAKLRKSGKQAEPWPEEPKQQQPPPPPAESQSQETKNQSDESSKPSDQPAEKPGPDK 120

Query: 121 AEGSAAEPNNPQPSPEPTKSTDETPKPNQEIQEPSNAKANTDANASGNASDETKEAAATG 180
           AEGSAAEPNNPQPSPEPTKSTDETPKPNQEIQEPSNAKANTDANASGNASDETKEAAATG
Sbjct: 121 AEGSAAEPNNPQPSPEPTKSTDETPKPNQEIQEPSNAKANTDANASGNASDETKEAAATG 180

Query: 181 EQSSEPKGKVKQHRERPIDARVTMEYGGGSHVNYMPQPQPVPVMSYNVXXXXXXXXXXXX 240
           EQSSEPKGKVKQHRERPIDARVTMEYGGGSHVNYMPQPQPVPVMSYNV            
Sbjct: 181 EQSSEPKGKVKQHRERPIDARVTMEYGGGSHVNYMPQPQPVPVMSYNVARPTASAAYYAA 240

Query: 241 XXXXXXXXXXXXXXXXXXXXQGYIDEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA 300
                               QGYIDEE                                A
Sbjct: 241 PPAPAPMSMPMPMARPGPSSQGYIDEEYSPSYYNRSSPYEPYYYPQPSPYRYQHYQQSSA 300

Query: 301 DDYYYGAPQQRSAFSPPRDAYGEMFNDENSNSCSVM 336
           DDYYYGAPQQRSAFSPPRDAYGEMFNDENSNSCSVM
Sbjct: 301 DDYYYGAPQQRSAFSPPRDAYGEMFNDENSNSCSVM 336



>Os05g0368600 Heavy metal transport/detoxification protein domain containing
           protein
          Length = 340

 Score =  107 bits (268), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 67/143 (46%), Positives = 80/143 (55%), Gaps = 13/143 (9%)

Query: 4   GSEPIECQVLVLRVSIHCEGCKKKVKKVLQHVPGVFRCDVDARSNKVIVTASRNMDANIL 63
            SE ++C+VL LRVSIHCEGCKKKVKKVLQ V GV+RCDVD RSNK  VT +  + A+ L
Sbjct: 2   ASESLQCKVLALRVSIHCEGCKKKVKKVLQRVEGVYRCDVDGRSNKATVTVTGKVSADTL 61

Query: 64  VAKLRKSGXXXXXXXXXXXXXXXXXXXXXXXXXXTKNQSDESSKPSDQPAEKPGPDKAEG 123
           V KLR++G                          TKNQ+ E    S +PAE   P  A G
Sbjct: 62  VRKLRRAG---KHAEQWPEEQQQQQPNGGQCQEETKNQAAEPGM-SGEPAEPEKP--ASG 115

Query: 124 SAAEPNNPQPSPEPTKSTDETPK 146
            AAEP++P       K T E PK
Sbjct: 116 DAAEPSDP-------KVTHEEPK 131



>Os05g0150700 Heavy metal transport/detoxification protein domain containing
          protein
          Length = 368

 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 36/68 (52%), Positives = 48/68 (70%), Gaps = 2/68 (2%)

Query: 4  GSEPIECQVLVLRVSIHCEGCKKKVKKVLQHVPGVFRCDVDARSNKVIVTASRNMDANIL 63
          G EP++ Q L L+VSIHCEGCKKKVKKVL  + GV++ D+D +  KV+V    N+  + L
Sbjct: 7  GPEPLKYQTLALKVSIHCEGCKKKVKKVLHSIEGVYKTDIDVQHQKVVVIG--NVSVDTL 64

Query: 64 VAKLRKSG 71
          V KL K+G
Sbjct: 65 VKKLVKTG 72



>Os07g0671400 Heavy metal transport/detoxification protein domain containing
          protein
          Length = 296

 Score = 68.6 bits (166), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 31/50 (62%), Positives = 40/50 (80%), Gaps = 1/50 (2%)

Query: 1  MASG-SEPIECQVLVLRVSIHCEGCKKKVKKVLQHVPGVFRCDVDARSNK 49
          MASG +EP++    VLRVSIHCEGCKKKVKKVLQ++ GV++  +DA  +K
Sbjct: 1  MASGEAEPLQYTTTVLRVSIHCEGCKKKVKKVLQNIEGVYKVTIDAAQHK 50



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.305    0.124    0.353 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,750,724
Number of extensions: 402103
Number of successful extensions: 4374
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 4357
Number of HSP's successfully gapped: 5
Length of query: 336
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 235
Effective length of database: 11,762,187
Effective search space: 2764113945
Effective search space used: 2764113945
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 156 (64.7 bits)