Os01g0933200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Heavy metal transport/detoxification protein domain containing protein.
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Os01g0933200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Heavy metal transport/detoxification protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 127.68 | 0.531 | 12.1 | -0.511 | 0.871 | -0.446 | 0.525 | -4.54 | 0.257 | 20.4 | 0.7 | 1622 | -- | -- |
| 134.55 | 0.54 | 12 | -0.0462 | 0.958 | -0.372 | 1.11 | -- | 0.436 | 21.3 | 30.03 | 24353 | -- | -- |
| 128.18 | 0.527 | 12.1 | -0.572 | 0.858 | -0.538 | -- | -4.93 | 0.268 | 20.5 | 0.5403 | 1597 | -- | -- |
| 141.99 | 0.555 | 12 | -0.157 | 0.907 | -0.394 | -- | -- | 0.426 | 20.8 | 32.83 | 24358 | -- | -- |
| 154.49 | 0.582 | 12 | -0.103 | -- | -0.534 | -- | -1.18 | 0.331 | -- | 0.5403 | 1597 | -- | -- |
| 140.6 | 0.556 | 12 | -0.0536 | 0.896 | -- | 1.61 | -- | 0.34 | 21.4 | -- | -- | -- | -- |
| 149.38 | 0.572 | 12 | -0.108 | 0.905 | -- | -- | -- | 0.341 | 21 | -- | -- | -- | -- |
| 163.49 | 0.596 | 12.1 | -0.193 | -- | 1.31 | -- | -- | 0.148 | -- | 0.3929 | 2441 | -- | -- |
| 142.38 | 0.556 | 12 | -- | 0.964 | -0.447 | -- | -- | 0.467 | 20.8 | 30.21 | 24299 | -- | -- |
| 196.34 | 0.655 | 12 | -0.107 | -- | -- | -- | -- | 0.335 | -- | -- | -- | -- | -- |
| 149.69 | 0.572 | 12 | -- | 0.905 | -- | -- | -- | 0.353 | 21 | -- | -- | -- | -- |
| 164.31 | 0.599 | 12 | -- | -- | -0.538 | -- | -- | 0.343 | -- | 0.3929 | 2441 | -- | -- |
| 196.64 | 0.655 | 12 | -- | -- | -- | -- | -- | 0.347 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 120.05 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 4 |
| 2 | 120.43 | temperature | 10 | 720 | > th | dose dependent | rect. | 5 | 2 |
| 5 | 121.31 | temperature | 25 | 10 | > th | dose dependent | rect. | 18 | 12 |
| 26 | 122.89 | temperature | 25 | 30 | > th | dose independent | rect. | 18 | 11 |
| 28 | 123.06 | radiation | 20 | 10 | < th | dose independent | rect. | 21 | 21 |
| 32 | 123.35 | temperature | 25 | 270 | < th | dose independent | rect. | 12 | 18 |
| 38 | 123.58 | wind | 5 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 39 | 123.63 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 4 |
| 45 | 123.76 | humidity | 70 | 10 | > th | dose independent | rect. | 21 | 21 |
| 47 | 123.80 | wind | 9 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 52 | 123.93 | wind | 1 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 61 | 124.15 | wind | 3 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 72 | 124.51 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 2 |
| 73 | 124.54 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 4 |
| 74 | 124.56 | wind | 3 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 79 | 124.61 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 18 |
| 82 | 124.69 | temperature | 25 | 90 | < th | dose independent | rect. | 15 | 16 |
| 91 | 124.81 | temperature | 20 | 720 | < th | dose independent | rect. | 5 | 1 |
| 92 | 124.81 | humidity | 90 | 30 | < th | dose dependent | rect. | 9 | 3 |
| 99 | 124.93 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 2 |
| 103 | 124.97 | humidity | 80 | 30 | < th | dose dependent | rect. | 7 | 5 |
| 118 | 125.09 | humidity | 70 | 30 | < th | dose independent | rect. | 11 | 1 |
| 126 | 125.12 | humidity | 50 | 30 | > th | dose dependent | rect. | 21 | 21 |
| 127 | 125.12 | radiation | 40 | 10 | < th | dose dependent | rect. | 21 | 21 |
| 149 | 125.30 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 9 |
| 150 | 125.33 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 3 |
| 165 | 125.41 | humidity | 60 | 43200 | > th | dose dependent | rect. | 2 | 13 |
| 166 | 125.42 | temperature | 25 | 30 | > th | dose independent | rect. | 18 | 8 |
| 182 | 125.45 | humidity | 60 | 43200 | > th | dose dependent | rect. | 1 | 15 |
| 210 | 125.57 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 6 |
| 225 | 125.64 | atmosphere | 995 | 30 | > th | dose dependent | rect. | 9 | 12 |
| 245 | 125.75 | humidity | 90 | 10 | < th | dose dependent | rect. | 11 | 1 |
| 255 | 125.82 | humidity | 60 | 43200 | > th | dose dependent | sin | 4 | NA |
| 257 | 125.82 | humidity | 90 | 720 | < th | dose dependent | rect. | 24 | 12 |
| 259 | 125.83 | humidity | 50 | 14400 | > th | dose independent | rect. | 19 | 3 |
| 277 | 125.91 | humidity | 80 | 270 | < th | dose independent | rect. | 6 | 6 |
| 278 | 125.91 | temperature | 20 | 10 | > th | dose independent | rect. | 11 | 18 |
| 327 | 126.12 | humidity | 70 | 43200 | > th | dose dependent | rect. | 3 | 8 |
| 332 | 126.15 | wind | 5 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 333 | 126.15 | humidity | 50 | 14400 | > th | dose independent | rect. | 19 | 12 |
| 360 | 126.21 | atmosphere | 995 | 30 | > th | dose dependent | rect. | 11 | 10 |
| 384 | 126.29 | humidity | 70 | 30 | < th | dose independent | rect. | 7 | 5 |
| 402 | 126.31 | temperature | 25 | 10 | > th | dose independent | rect. | 18 | 5 |
| 415 | 126.34 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 4 |
| 434 | 126.39 | temperature | 20 | 720 | > th | dose independent | rect. | 17 | 2 |
| 439 | 126.40 | temperature | 25 | 90 | < th | dose independent | sin | 14 | NA |
| 441 | 126.40 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 10 |
| 464 | 126.45 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 12 |
| 482 | 126.50 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 12 |
| 483 | 126.50 | temperature | 20 | 10 | > th | dose independent | rect. | 9 | 20 |
| 543 | 126.61 | radiation | 10 | 30 | > th | dose independent | rect. | 9 | 3 |
| 581 | 126.67 | radiation | 30 | 30 | < th | dose independent | rect. | 21 | 14 |
| 589 | 126.68 | atmosphere | 995 | 720 | > th | dose dependent | rect. | 9 | 10 |
| 601 | 126.70 | humidity | 70 | 10 | > th | dose independent | rect. | 23 | 19 |
| 620 | 126.72 | humidity | 80 | 90 | < th | dose dependent | sin | 6 | NA |
| 623 | 126.73 | temperature | 30 | 10 | < th | dose independent | rect. | 11 | 10 |
| 627 | 126.74 | wind | 5 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 665 | 126.81 | atmosphere | 1000 | 720 | > th | dose independent | rect. | 9 | 10 |
| 666 | 126.81 | humidity | 60 | 43200 | > th | dose dependent | no | NA | NA |
| 691 | 126.84 | humidity | 60 | 43200 | > th | dose dependent | rect. | 9 | 23 |
| 693 | 126.85 | humidity | 80 | 30 | < th | dose independent | rect. | 9 | 3 |
| 705 | 126.86 | humidity | 60 | 43200 | > th | dose dependent | rect. | 12 | 23 |
| 711 | 126.88 | radiation | 20 | 10 | < th | dose independent | rect. | 23 | 19 |
| 715 | 126.89 | wind | 1 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 740 | 126.92 | temperature | 10 | 720 | > th | dose dependent | rect. | 9 | 10 |
| 757 | 126.95 | radiation | 20 | 30 | > th | dose independent | rect. | 11 | 1 |
| 770 | 126.96 | temperature | 20 | 10 | > th | dose independent | rect. | 11 | 14 |
| 776 | 126.98 | temperature | 20 | 720 | > th | dose independent | rect. | 15 | 6 |
| 777 | 126.98 | temperature | 25 | 720 | < th | dose independent | rect. | 12 | 12 |
| 778 | 126.98 | humidity | 70 | 10 | > th | dose independent | rect. | 21 | 13 |
| 802 | 127.02 | atmosphere | 995 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 816 | 127.05 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 877 | 127.13 | temperature | 25 | 270 | < th | dose dependent | rect. | 7 | 2 |
| 885 | 127.14 | humidity | 80 | 10 | < th | dose dependent | sin | 5 | NA |
| 933 | 127.22 | atmosphere | 995 | 720 | > th | dose dependent | rect. | 9 | 1 |
| 938 | 127.22 | atmosphere | 995 | 270 | > th | dose dependent | rect. | 7 | 13 |
| 940 | 127.23 | humidity | 70 | 10 | > th | dose independent | sin | 4 | NA |
| 970 | 127.26 | atmosphere | 1000 | 720 | > th | dose independent | rect. | 7 | 14 |
| 987 | 127.28 | radiation | 40 | 30 | < th | dose independent | rect. | 21 | 21 |